Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20pahari_20[refseq_20GCF_5F900095145.1_202017-04-28] 2,581 sequences; 2,475,012,951 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq2 210 2e-48 seq854 140 2e-27 seq13 125 5e-23 seq22 118 8e-21 seq26 116 3e-20 seq6 105 5e-17 seq4 105 5e-17 seq23 86.0 5e-11 >seq2 Length=163939365 Score = 210 bits (232), Expect = 2e-48 Identities = 794/1229 (65%), Gaps = 32/1229 (3%) Strand=Plus/Plus Query 281663 GTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACA 281722 ||||| | |||||||| |||| | |||||| ||||||||||||||||| | || | Sbjct 91325342 GTCATGACTCCACCAGCAGTTTNAATACCAAGGGAAAGAGGAGTGACATCCAAGAGCAGC 91325401 Query 281723 ATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCA 281782 | || ||| || || | | ||| ||||| ||||| || | ||| |||||| Sbjct 91325402 AAATCCTGACCATTCCCAGACTTGTCTCCAGAGAGAATGGCTGCCTGGACAGCTGCACCA 91325461 Query 281783 TATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTT 281842 || |||||||||||||| || |||| | | ||| |||| ||| |||||||| || | | Sbjct 91325462 TAGGCAACAGCTTCATCGGGGTTAATGCTCTTATTCAGTTCTTTTCCATTGAAGAAGTCT 91325521 Query 281843 GAAAGAAGTTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATG 281901 ||||||| ||| | ||| || || | | || || || || || ||| | ||||| Sbjct 91325522 TGCAGAAGTT-TCTGAATCTTGGGGATTC-TGTAGAACCACCCACCAAGACAGTATCATG 91325579 Query 281902 CACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGC 281961 | |||||| ||||||||||| | ||| | | || || || || || || | Sbjct 91325580 GATCTGTGACTTATCCAGTTTGGCATCTTGAAGGGCCTTCTCTACAGGGTCCAGTGTGCC 91325639 Query 281962 TCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATC 282021 | |||| ||| | | | ||| || || | ||| | |||| | | || | || Sbjct 91325640 ACGGAACAGGTCAGCATTCAATTCCTCAAACTGAGCCCGGGTAATGGAGGTATAGAAGTC 91325699 Query 282022 AATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGT--CGAAGAAGATAGTGCA 282079 |||||| || | | |||||||| ||||| | | || || | || ||| |||| Sbjct 91325700 AATTCCCTCATAGAGAGAATCAATCTCAATACTGGCCTGGGTGCTGGAGGAGAGGGTGCT 91325759 Query 282080 CGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTA-AG---GCTTTTGCTGATTGATT 282135 | || || | ||||| | || || || || | || ||| | || |||| Sbjct 91325760 C--TTGGCCCTCTCACAGGTGGTGTGGAGACTGCGGACAGCTCTCTTGTTCTCGCTGAT- 91325816 Query 282136 CAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATG--TTACAAGACGATTA 282193 || | || | |||| ||| || || |||| | ||| | || | || || Sbjct 91325817 ---GTCCTTCTTGTGCTTTCGCTTAAACTCATCAATGAA--ATGGTTGACCATTCGGTTG 91325871 Query 282194 TCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCA 282253 ||||| ||||| || ||||| | || | ||| | || | | | |||| |||| |||| Sbjct 91325872 TCAAATTCTTCTCCACCCAAGTGGGTGTCTCCAGCTGTTGATTTGACTTTAAAAATTCCA 91325931 Query 282254 TCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACA 282313 || |||| || | | |||||| || ||||| |||| |||||||| || ||| Sbjct 91325932 TCCTCAATAGTGAGGGCTGACACATCAAAAGTACCACCTCCCAAGTCAAAAATCAGCACA 91325991 Query 282314 TTCATTT---CTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGT 282370 ||| ||| || || | || ||||| | ||||| |||| ||||||||| ||||| Sbjct 91325992 TTCCTTTCAGCTCTGAC---CTTCTTATCCAAGCCATAAGCAATAGCAGCAGCCATTGGT 91326048 Query 282371 TCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGT 282430 ||||| | |||| | ||||| || || ||||| |||| |||||||| || || ||| Sbjct 91326049 TCATTGGTGATTCGAAGTACATTGAGGCCCGCAATAGTTCCAGCATCTTTTGTTGCCTGT 91326108 Query 282431 CTTTGTGAATCGTTAAAATATGC--AGGAACAGTAATAACGGCATCTGTTACTTCTTTTC 282488 | || || || || || || || || | || | ||||||| || || |||| Sbjct 91326109 CGCTGAGAGTCATTGAAGTAAGCTGTGGTATTGT-GTTACGGCATTGGTAACAGTCTTTC 91326167 Query 282489 CAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTG 282548 | | || || ||| ||| ||||| || | | || ||| || || | || |||| Sbjct 91326168 CGAGGTATGCTTCTGCAATTTCCTTCATCTTTGTCAGAACCATGGAGGACACTTCCTCTG 91326227 Query 282549 G--AGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAAC 282606 | |||| | | ||| | | | || | | |||| | | || | || | Sbjct 91326228 GGTAGAA-ACTTTTTGTCTCCCATCTG-TGTTCCACTTGGACCTTGGGCCTGCCTGCATC 91326285 Query 282607 ATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATC 282666 ||| | || | || ||||| | |||||||| || |||| | |||| ||| Sbjct 91326286 ATTCACCACCATGAAGGGCCAGTGCTTCATATCAGACTGAANAACAGCATCATCAAACCT 91326345 Query 282667 TCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATA 282726 | | || | | ||| |||||||||| || ||||| || || | |||| | |||| Sbjct 91326346 ACGCCTGATCAGACATTTGGCATCAAAAACTGTGTTGGTGGGGTTCATTGCAACCTGATT 91326405 Query 282727 TTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGT 282786 ||||| ||||| ||||| | | ||||| || || || | ||| || || || || Sbjct 91326406 CTTGGCCGCATCCCCAATTAATCGCTCTGTGTCCGTGAAAGCAACGTAGCTCGGCGTGGT 91326465 Query 282787 GCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACA 282846 || ||||| || ||||| ||| ||||||| || || |||| || | ||||| ||||| Sbjct 91326466 GCAGTTACCCTGGTCATTGGCACTAATTTCCACCTTTCCATGCTGGAAGACACCCACACA 91326525 Query 282847 ACTAAAAGTTGTTCCTAAATCAATACCAA 282875 | || || || | |||||| |||| Sbjct 91326526 GGAGTAGGTGGTGCCAAGATCAATNCCAA 91326554 >seq854 Length=65724 Score = 140 bits (154), Expect = 2e-27 Identities = 345/515 (67%), Gaps = 7/515 (1%) Strand=Plus/Minus Query 281417 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 281476 ||||| | |||| ||||| || || ||||||||||| | ||||| || || ||||| Sbjct 43516 TTATCTACAGCAGAAACATTGAGGATGCCATTGGCATCNATGTCAAAAGTAACCTCAATC 43457 Query 281477 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTA 281536 ||||| ||||| | | || || || || ||| | | ||| |||| || || Sbjct 43456 TGAGGAACCCCACGGGGTGCTGGAGGTATGCCTGTGAGCTCAAACTTTCCAAGCAGGTTG 43397 Query 281537 TTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGAT-AGTAACTACAGTTTGATT 281595 || || || || | | |||||| || | | || || |||| | | | || || Sbjct 43396 TTGTCCTTGGTCATGGCCCTTTCACCTTCATACACCTGAATGAGTA-CACCTGGCTGGTT 43338 Query 281596 ATCTGAATAAGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAA 281654 ||| || || || || || |||| | | || || || || || || | | | Sbjct 43337 ATCAGAGTAGGTGGTGAANG-TCTGTGTCTGCTTGGTGGGGATGGTGGTATTGCGCTTGA 43279 Query 281655 TAATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAA 281714 | | ||||| | |||||||| ||||| | |||||| ||||||||||||||||| | Sbjct 43278 TGAGGACNGTCATGACTCCACCAGCAGTTTCAATACCAAGGGAAAGAGGAGTGACATCCA 43219 Query 281715 CTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAG 281774 || | | || |||| || ||| | | | ||| ||||| ||||| || | | Sbjct 43218 AGAGCAGCAAATCCTGAACATTCTCAGAATTGTCTCCAGAGAGAATGGCTGCCTGGAC-G 43160 Query 281775 CAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGA 281834 | |||||||| ||||||||||||| || |||| | | ||| |||| ||| ||||||| Sbjct 43159 CTGCACCATAGGCAACAGCTTCATTGGGGTTAATGCTCTTATTCAGTTCTTTTCCATTGA 43100 Query 281835 AAAAATTTGAAAGAAGTTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACA 281893 |||| | | ||||||| ||| | ||| || || | | || || || || || ||| Sbjct 43099 AAAAGTCTTGCAGAAGTT-TCTGAATCTTGGGGATTCTGGTAGAACCACCCACCAAGACA 43041 Query 281894 ATTTCATGCACCTGTGATTTATCCAGTTTTGAATC 281928 || ||||| | |||||| || |||||||| | ||| Sbjct 43040 ATATCATGGATCTGTGACTTGTCCAGTTTGGCATC 43006 >seq13 Length=116904986 Score = 125 bits (138), Expect = 5e-23 Identities = 452/693 (65%), Gaps = 18/693 (3%) Strand=Plus/Minus Query 282191 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 282250 || ||||| ||||| | ||||| | || | ||| | || | | | |||| |||| | Sbjct 35912464 TTGTCAAAGTCTTCTGCACCCAAGTGGGTGTCTCCAGCTGTTGATTTGACTTCAAAAATT 35912405 Query 282251 CCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGT 282310 ||||| |||| || | | | |||||| || ||| | |||| |||||| | || Sbjct 35912404 CCATCCTCAATAGTGAGGATTGACACATCAAAAGTGCCATCTCCCAAGTCAAAA-TCAGC 35912346 Query 282311 ACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGT 282370 | |||| ||| | || |||| | |||| |||| |||||||||||||||| Sbjct 35912345 ATATTCCTTTAAGCTCCAACCTTCTTATTTAAGTCATAAGCAATAGCAGCAGCAGTTGGT 35912286 Query 282371 TCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGT 282430 |||| ||||||| || ||||||| |||||||| |||| |||||||| || || || Sbjct 35912285 ACATTGATAATTCAAAATACATTAAAGCCAGCAATAGTTCCAGCATCTTT-GTTGCCTGA 35912227 Query 282431 CTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTAC-TTCTTTTCC 282489 | || ||||| || || || || || || ||||| || |||| || || |||||| Sbjct 35912226 CCCTGAGAATCATTGAAGTAAGCTGGCACTGTAATCACAGCATTGGTAACAGTCTTTT-T 35912168 Query 282490 AATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCT-- 282547 || ||||| | | |||| ||| || | | | || ||| || || | || ||| Sbjct 35912167 AAGGTAAGCTTCTCCAGTTTCTTTTATCTGTGTCAGAACCATGGAGGACACTTCCTCTGA 35912108 Query 282548 GGAGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACA 282607 | |||| | | ||| | | |||| ||| |||| | | || | || || Sbjct 35912107 GTAGAA-ACTTTTTGTCTCCCCTTTG-TATTCAACTTGGACCTTAGGCCTGCCTGCATCA 35912050 Query 282608 TTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTA--AAAT 282665 || | || |||| ||||| | |||| ||| || |||| | ||||| ||| Sbjct 35912049 TTCACCACCATAAAAGGCCAGTGCTTCAAATCAGACTGAAAA---ACAGCATTATCAAAC 35911993 Query 282666 CT-CTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGA 282724 || | | || | | ||| ||||||||| || ||||| | || | |||| | | | Sbjct 35911992 CTACGTCTGATCAGACATTTGGCATCAAAAGCTGTGTTGGTCAGGTTCATTGCAACCTAA 35911933 Query 282725 TATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTT 282784 | ||||||||||| |||| | |||||||| || || || | | | || || || Sbjct 35911932 TTCTTGGCTGCATCCCCAAATAATTGTTCTGTGTCAGTGAAAGCATCGTAGTTCGGCGTG 35911873 Query 282785 GTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACA 282844 || | ||||| || ||||| || || ||||| || || ||| | | ||||| ||| Sbjct 35911872 GTACAGTTACCCTGGTCATTGGCTATTATTTCTACCTTTTCATGCTAGAAGACACCCACA 35911813 Query 282845 C--AACTAAAAGTTGTTCCTAAATCAATACCAA 282875 | || || | | || || | |||||| |||| Sbjct 35911812 CAGAAGTAGA--TGGTGCCAAGATCAATGCCAA 35911782 Score = 98.7 bits (108), Expect = 7e-15 Identities = 107/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 || ||||| | ||||| |||| ||||||||||||||||||||| || |||| | ||| Sbjct 35906327 TTCTTATCCAAGCCATAAGCAATAGCAGCAGCAGTTGGTTCATTGATGATTCGAAGTACA 35906268 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 || || || ||||| |||| |||||||| || || |||| || || || || || || Sbjct 35906267 TTGAGGCCTGCAATAGTTCCAGCATCTTTTGTTGCCTGTCGCTGAGAGTCATTGAAGTAA 35906208 Query 282452 GCAGGAACAGTAATAACGGCAT 282473 || || || || | ||||||| Sbjct 35906207 GCTGGCACTGTGACCACGGCAT 35906186 Score = 93.3 bits (102), Expect = 3e-13 Identities = 132/186 (71%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 282690 CAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 282749 |||||| || ||||| || || | |||| | |||| ||||| ||||| || || | Sbjct 35905610 CAAAAACTGTGTTGGTGGGGTTCATTGCAACCTGATTCTTGGCCGCATCCCCGATTAATC 35905551 Query 282750 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 282809 | ||||| || || || | ||| || ||||| ||||| ||||| || ||||| |||| Sbjct 35905550 GCTCTGTGTCCGTGAAAGCAACGTAGCTCGGAGTGGTGCGGTTACCCTGGTCATTGGCAA 35905491 Query 282810 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 282869 ||||||| || || |||| || | ||||| ||||| | || || || | ||||| Sbjct 35905490 TAATTTCCACCTTTCCATGCTGGAAGACACCCACACAGGAGTAGGTGGTGCCAAGATCAA 35905431 Query 282870 TACCAA 282875 | |||| Sbjct 35905430 TGCCAA 35905425 >seq22 Length=59539374 Score = 118 bits (130), Expect = 8e-21 Identities = 747/1192 (63%), Gaps = 16/1192 (1%) Strand=Plus/Minus Query 281663 GTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATC-AACTAGGAC 281721 ||||| | ||| |||||||| || || || ||||| || |||| || || ||| | | Sbjct 2902094 GTCATCACACCCCCAGCTGTCTCCAATCCTAGAGACAGGGGAGCTACGTCCAACAAAAGC 2902035 Query 281722 AATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACC 281781 || || || | ||||||| | | || | | ||||||||| || | ||||| || Sbjct 2902034 AA-ATCCTGTACTTTTTCAGATTTGTCGCCCATTAAAATAGCTGCCTGGACGGCAGCTCC 2901976 Query 281782 ATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATT 281841 || || || || ||||| ||||| | | | | || || | ||||| || | | Sbjct 2901975 GTAGGCGACCGCCTCATCGGGATTGATACTCTTGTTGAGATCCCGTCCATTAAAGTAGTC 2901916 Query 281842 TGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATG 281901 ||| |||| | ||||| || || || | || || || |||| ||||| ||||| Sbjct 2901915 CTGAAGCAGTTTTTGCACCTTTGGGATGCGGGTAGAGCCCCCTACTAGAACAATGTCATG 2901856 Query 281902 CACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGC 281961 | | | || |||| || | |||| | | ||||| || || ||||| | Sbjct 2901855 GATTTTAGCCTTGTCCATCTTGGCATCCCGAAGAGACTTTTCCACAGGCTCAAGTGTGCC 2901796 Query 281962 TCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA- 282019 |||||| | ||||| ||| || ||||| || |||||||| || ||| | || || Sbjct 2901795 TCTAAATAGGTCTGCACACAGCTCTTCAAACCGTGCTCTAGT--GATGGACGTGTAGAAG 2901738 Query 282020 TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCA 282079 || || || ||||||| || || | || | | | || || || || |||| Sbjct 2901737 TCGATGCCCTCGAACAGGGAGTCGATCTCCAGGCTGGCCTGGGTGCTGGACGACAGTGTC 2901678 Query 282080 CGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGC----TTTTGCTGATTGATT 282135 | || || | || || ||||| | || | || | || || | ||| |||| Sbjct 2901677 CTCTTGGCCCTCTCGCACGCTGTGCGCAGCCGCCGCACCGCGCGCTTGTTCTGGCTGATG 2901618 Query 282136 CAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATC 282195 || | || | || |||||||| || || || | | || || || || || Sbjct 2901617 ----TCCTTCTTGTGCTTCCTCTTGAACTCCTCCACGAAGTGGCTCACCAGCCGGTTGTC 2901562 Query 282196 AAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATC 282255 || || || || |||| | || | || | ||| || | || | ||| | || || Sbjct 2901561 GAAGTCCTCCCCGCCCAGGTGCGTGTCGCCCGCCGTGGCCTTCACCTCGAAGATGCCGTC 2901502 Query 282256 TTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATT 282315 || | | || | | || || || || || |||| ||||| || || || | Sbjct 2901501 GTCGATCGTCAGGATGGACACGTCGAACGTGCCGCCCCCCAGGTCAAAGATGAGCACGTG 2901442 Query 282316 CATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATT 282375 | ||| || |||||| | || || |||| || || || || || ||||| Sbjct 2901441 CCGCTCTCCGTGACTCCCTTTATCCAAGCCGTAGGCAATGGCGGCCGCTGTGGGCTCATT 2901382 Query 282376 AATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTG 282435 || ||||||| ||||| || || || || |||||||| || ||||| || | || Sbjct 2901381 GATTATTCTCAGCACATTGAGTCCTGCGATGACACCTGCATCCTTGGTGGCCTGCCGCTG 2901322 Query 282436 TGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATA 282495 || || || ||||| || || || || || || || | || || | | || | | | Sbjct 2901321 AGAGTCATTGAAATAGGCTGGCACCGTGATCACAGCGTTCGTGACATTGTGGCCCAAAAA 2901262 Query 282496 AGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATA 282555 ||| ||| || | ||||| || | | | ||| ||||| || | ||||| | | | Sbjct 2901261 AGCCTCTGCAGTCTCCTTCATCTTCGTCAGTACCATGGATGAGATCTCCTCTGG-GTAGA 2901203 Query 282556 TTGCTTGGAT-TCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAA 282614 |||| | || || ||| || || | | || || | |||| || | Sbjct 2901202 AGGCTTTCTTCTCTCCTTTATAGGACACCATCACCTTGGGCTTGCCTGCTTCATTGATCA 2901143 Query 282615 CTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAA 282674 ||| |||||||||| ||||||||||| || ||| | |||||||| | || |||| Sbjct 2901142 CTTGAAATGGCCAAAGCTTCATATCTGACTGCACAACAGGATCATTAAACTTCCTGCCAA 2901083 Query 282675 TTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTG 282734 ||| ||||| |||||||||| ||| || ||||| | || | || | ||||| | Sbjct 2901082 TTAGACGTTTGGCATCAAAAACAGTGTTTTGGGGATTCATGGCCACCTGGTTCTTGGCAG 2901023 Query 282735 CATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTAC 282794 | || || || || | || || || || || | ||||| || || ||||| || | Sbjct 2901022 CGTCGCCGATGAGGCGCTCGGTGTCGGTGAAGGCCACATAGCTGGGGGTCGTGCGGTTGC 2900963 Query 282795 CTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACA 282846 | || || || || || || || || || || | || | || || ||||| Sbjct 2900962 CCTGGTCGTTGGCGATGATCTCCACCTTGCCGTGCTGGAACACGCCCACACA 2900911 >seq26 Length=50160631 Score = 116 bits (128), Expect = 3e-20 Identities = 188/267 (70%), Gaps = 4/267 (1%) Strand=Plus/Minus Query 281663 GTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACA 281722 ||||| | |||| ||| ||||| | |||||| ||||||||||||||||| | || | Sbjct 6910405 GTCATGACTCCACTAGCAGTTTCAATACCAAGGGAAAGAGGAGTGACATCCAAGAGCAGC 6910346 Query 281723 ATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCA 281782 | || |||| || | | || | | | ||||| ||||| || | ||| |||| | Sbjct 6910345 AAATCCTGAACATTCTTAGACGTCT--CTAGATAGAATGGCTGCCTGCACAGCTGCACTA 6910288 Query 281783 TATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTT 281842 || |||| |||||||||||| |||| | | ||| || ||| |||||||| || | | Sbjct 6910287 TAGGCAATAGCTTCATCAGGGTTAATGCTCTTATTCGATTCTTTTCCATTGAAGAAGTCT 6910228 Query 281843 GAAAGAAGTTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATG 281901 | ||||||| ||| | ||| || || | | || || | || || ||||| ||||| Sbjct 6910227 CACAGAAGTT-TCTGAATCTTGGGGATTCTGGTAGAACCATCCACCAAGACAATATCATG 6910169 Query 281902 CACCTGTGATTTATCCAGTTTTGAATC 281928 |||||||| || || ||||| | ||| Sbjct 6910168 AACCTGTGACTTGTCTAGTTTAGCATC 6910142 >seq6 Length=146485248 Score = 105 bits (116), Expect = 5e-17 Identities = 144/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 282681 GTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTC 282740 |||| ||||||||||| || ||| | ||||| | ||| | |||| ||||||||||| | Sbjct 36023669 GTTTGGCATCAAAAATTGTGTTGTTGGGATTCATTGCTACCTGATTCTTGGCTGCATCCC 36023728 Query 282741 CAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGAT 282800 |||| | || ||||| | | || | |||||| || || ||||| |||| |||| Sbjct 36023729 CAATTAATTGCTCTGTGTTACTGAAAGCAACATAGCTCGGTGTGGTGCGGATACCCTGAT 36023788 Query 282801 CATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTC 282860 |||| ||||| ||||| || || |||| || | ||||| ||||| | || || | Sbjct 36023789 CATTGGCAATTATTTCCACCTTTCCATGCTGGAAGACACCCACACAGGGGTAGGTGGTGC 36023848 Query 282861 CTAAATCAATACCAATAGCAA 282881 | | |||||| |||| |||| Sbjct 36023849 CAAGATCAATGCCAACTGCAA 36023869 >seq4 Length=164141553 Score = 105 bits (116), Expect = 5e-17 Identities = 762/1217 (63%), Gaps = 57/1217 (5%) Strand=Plus/Plus Query 281673 CACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAA 281732 ||||||| ||||| | |||||| |||||||||||||||| | || | | |||| Sbjct 24374680 CACCAGCAGTTTCAATACCAAGGAAAAGAGGAGTGACATCCAAGAGCAGCGAACCCTGAA 24374739 Query 281733 GTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAG 281792 || ||| | | || | ||| |||| || | ||| ||||||| ||||||| Sbjct 24374740 CATTCTCAGACTTGTCTCCTGATAAAATGACTGCCTGGACAGCTACACCATAAGCAACAG 24374799 Query 281793 CTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTT 281852 |||||||||| |||| | | ||| |||| |||||||||||| || | | |||| || Sbjct 24374800 CTTCATCAGGGTTAATGCTCTTATTCAGTTCTTTACCATTGAAGAAGTCTTGCAGAAATT 24374859 Query 281853 GTCTTAC-CTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGAT 281911 ||| | ||||| || | | || || || || || ||||| | ||| | |||||| Sbjct 24374860 -TCTGAGTCTTAGAGATTCTGGTAGAACCACCCACCAAGACAATATAATGGATCTGTGAC 24374918 Query 281912 TTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAG 281971 || || ||||| | ||| | || || || || | || | | |||| | Sbjct 24374919 TTGTCTAGTTTGGCATCTTGAAGGACCTTCATTACAGGGTTGAGTGTGCCACAGAACATG 24374978 Query 281972 TCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCG 282031 || | | |||||||| |||||||| | | || | | || | ||| |||| || Sbjct 24374979 TCAGCATTCAGTTCTTCAAATTTAGCCCAGGAAATGGAGGTATAGAATTCAGTTCCCTCA 24375038 Query 282032 AACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAG--TGCACGTTTAGCAC 282089 | | ||||| || ||||| | | || || || || || || | || || | Sbjct 24375039 TAGAGAGAATAAATCTCAATACTGGCCTGGGTGCTGGAGGAAAGGGTGAA---TTGGCCC 24375095 Query 282090 GTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAATCTGTT-TTA 282148 ||||| || || | || | | | ||| | || || ||| ||| || Sbjct 24375096 ACTCACAGGCAGTGCAGAGGCGCCTGACAGCTCT--CTAGTTC--TCACTGATGTCCTTG 24375151 Query 282149 TATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGA--CGATTATCAAAATCTTCAC 282206 | || | ||| || | ||| | ||| | || | | || ||||| ||||| Sbjct 24375152 TGCTTCCCCTTAAATTTAGCAATGAA--ATGGTTTAACATTCAGTTGTCAAAGTCTTCTT 24375209 Query 282207 CTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACA 282266 | ||||| | || | ||| | | | | | |||| |||| |||| | ||| || | Sbjct 24375210 CACCCAAGTGGGTGTCTCCAGCTATTGATTTGACTTCAAAAATTCCAGCCTCAGTAGCGA 24375269 Query 282267 AAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGT 282326 | | ||||| || ||||| |||| |||||||| || |||||| ||||| Sbjct 24375270 GGATTGACCCATCAAAAGTGCCACCTCCCAAGTCAAAAATCAGCACATTCCTTTCT---- 24375325 Query 282327 CTTGGTTTTTATCAAGACCATACGCAAAAGCA---GCAGCAGTTGGTTCATTAATAATTC 282383 ||| ||||| |||| |||| ||||||||||||||||| |||||| Sbjct 24375326 -------------AAG-CCATAAGCAATAGCAGCAGCAGCAGTTGGTTCATTGATAATTT 24375371 Query 282384 TCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGT 282443 | |||| || ||||||| ||| |||||||| || || || || || || || | Sbjct 24375372 GAAGTTCATTGAGGCCAGCAACAGTTCTAGCATCTTTTGTTGCCTGGCTCTGAGAGTCAT 24375431 Query 282444 TAAAATATGCAGGAACAGTAATAACGGCATCTGTT-ACTTCTTTTCCAATATAAGCGCTT 282502 ||||||| || || || || | || |||| |||| || ||||||| ||||| | Sbjct 24375432 TAAAATAGGCTGGCACTGTGACCACAGCAT-TGTTCACAGTCTTTCCAAGGTAAGCTTCT 24375490 Query 282503 GCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGG--AGAATATTGCT 282560 || ||| ||||| || | | || |||||| || | || ||| | |||| | | | Sbjct 24375491 GCAATTTCCTTCATCTTTGTCAGAACCATTGAGGACACTTCCTCTAGTTAGAAAACT-TT 24375549 Query 282561 TGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAA 282620 || | | |||| | | |||| | | || | || |||| | || | | Sbjct 24375550 TGTCTCCCCTTTGCACTCA-ACTTGGACCTTGGGCCTGCCTGCATCATTCAGCACCATGA 24375608 Query 282621 ATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAA---ATCTCTACCAATTA 282677 | | ||| | |||||||| || |||||| |||| ||| || ||| || | Sbjct 24375609 AGGACCAGTGCTTCATATCAGACTGAACAACAGCATCATCAAACCTATGTCT---GATCA 24375665 Query 282678 ATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCAT 282737 | ||| |||||||||| || || | | || | |||| |||||| ||| Sbjct 24375666 GACATTTGGCATCAAAAACTGTGTTCATGAGGTTCATTGCAACTTGATTCTTG------- 24375718 Query 282738 CTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTT 282797 ||||| | |||||||| || || || | | |||| | | |||| ||||| | Sbjct 24375719 -CCCAATTAATTGTTCTGTGTCAGTGAAAGCAGCATAGCACTCTGGGGTGCAGTTACCCT 24375777 Query 282798 GATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTG 282857 | ||| | ||||| ||||| || || |||| || | ||||| ||||| | || | Sbjct 24375778 GGTCACTGGCAATTATTTCCACCTTTCCATGCTGGAAGACACCCACACAGGAGCAGGTGG 24375837 Query 282858 TTCCTAAATCAATACCA 282874 | || | |||||| ||| Sbjct 24375838 TGCCAAGATCAATGCCA 24375854 Score = 95.1 bits (104), Expect = 9e-14 Identities = 216/318 (68%), Gaps = 18/318 (6%) Strand=Plus/Minus Query 281254 GTGAGTATAATTTTCTAATTCATTTTTAGAATCAACAGCAGCTTTTTT--CTTGTTATCT 281311 || || ||| |||| |||||||| | | |||| || ||| ||| ||| || ||| Sbjct 22068158 GTAAGCATAGCTTTCCAATTCATTCCTGGTGTCAAT-GC-GCTCTTTGAGCTTTTTGTCT 22068101 Query 281312 GCTTCTTCAAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTT 281371 | || |||| | | ||| || ||| ||| || ||||||| |||||| | || Sbjct 22068100 TCCTCAGCAAACTTCTCAGCATCATTAACCATCCTTTCAATTT---CTTCAG-GTGTCAG 22068045 Query 281372 CCGCGATT----ATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGA---TTTATCAGC 281424 || || ||| ||||| || || || || ||||||| || ||| || | Sbjct 22068044 GCGGTTTTGGTCATTGGTAATTGTGATTTTGTT---TTTGTTTCCTGTACCTTTGTCTTC 22067988 Query 281425 GGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGAC 281484 || ||||| |||||||||||| |||| | ||||| |||||||||||||| || || Sbjct 22067987 AGCTGTCACTCGAAGAATACCATTAACATCTATCTCAAAGGTGACTTCAATTTGGGGAAC 22067928 Query 281485 CCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTT 281544 || | ||||||| || || || || || ||||||||||||| || ||| ||||| Sbjct 22067927 TCCGCGGGGAGCAGGAGGAATTCCAGTCAGATCAAATGTTCCCAGAAGATGATTGTCTTT 22067868 Query 281545 AGTGAATTTTCGTTCACC 281562 || | ||||||||| Sbjct 22067867 TGTTAGGGGTCGTTCACC 22067850 >seq23 Length=89631738 Score = 86.0 bits (94), Expect = 5e-11 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 131176 TGTAGTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTAT 131235 ||| ||||| || | || ||||| ||||| ||||||||| | || || | ||||| Sbjct 50486195 TGTCGTAGCTACTGTTGCTTTTGGAATGGGCATTAATAAAGCTGACATTCGCAAAGTTAT 50486136 Query 131236 TCATTACGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCG 131295 |||||| || || || ||| | || ||| ||||| || |||||||||||||| || || Sbjct 50486135 TCATTATGGTGCCCCTAAGGAAATGGAATCCTATTACCAGGAAATTGGTAGAGCTGGCCG 50486076 Query 131296 TGATGGA 131302 |||||| Sbjct 50486075 GGATGGA 50486069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740503683807306