Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20pahari_20[refseq_20GCF_5F900095145.1_202017-04-28] 2,581 sequences; 2,475,012,951 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq13 87.8 3e-12 >seq13 Length=116904986 Score = 87.8 bits (96), Expect = 3e-12 Identities = 122/171 (71%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 58369 GATAGCCAGAGCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGT 58428 ||||||| | || | |||||||||| | |||| ||||| | || || || || ||||| Sbjct 78103981 GATAGCCGGCGCCCTGTGGTGGTACTTTGTATCGAAAGGAGTTGAGTATTTGGACACAGT 78103922 Query 58429 GTTTTTCATACTTAGGAAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTT 58488 |||||| || || ||||| || ||||| || ||| || ||||| || ||||| | Sbjct 78103921 GTTTTTTATCCTGAGGAAGAAAAACAATCAGGTCTCCTTCCTTCACGTGTACCATCACTG 78103862 Query 58489 TACTATGTTTACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCA 58539 || ||||| ||| | | ||| | || || || ||| | || ||||| || Sbjct 78103861 CACCATGTTCACTCTGTGGTGGATTGGAATCAAGTGGGTGGCTGGAGGCCA 78103811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903382053696160