Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20pahari_20[refseq_20GCF_5F900095145.1_202017-04-28] 2,581 sequences; 2,475,012,951 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq4 152 6e-32 seq9 143 3e-29 seq13 134 2e-26 seq28 105 8e-18 seq15 105 8e-18 seq1 105 8e-18 seq16 98.7 1e-15 seq8 96.9 4e-15 seq21 89.7 6e-13 seq26 86.0 7e-12 seq11 82.4 9e-11 >seq4 Length=164141553 Score = 152 bits (168), Expect = 6e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| ||||| ||||| || || || || || || |||||||| | Sbjct 18056769 ATGCAGATTTTTGTGAAGACCCTTACGGGAAAAACCATCACGCTCGAGGTTGAACCCTCG 18056710 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | |||| | ||||| || || ||||| ||||| ||||||||||| || ||| Sbjct 18056709 GACACTATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 18056650 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | || |||||||||||||| || || |||| ||||| | | ||||| || Sbjct 18056649 CAGAGGTTGATCTTTGCTGGTAAGCAGCTGGAAGATGGCCGTACTTTGTCGGACTACAAC 18056590 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||||||||| || || |||||||| || ||| | ||||| ||||| Sbjct 18056589 ATCCAAAAGGAGTCTACCCTTCATCTTGTGTTGAGACTTCGGGGTGG 18056543 Score = 152 bits (168), Expect = 6e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| ||||| ||||| || || || || || || |||||||| | Sbjct 99334782 ATGCAGATTTTTGTGAAGACCCTTACGGGAAAAACCATCACGCTCGAGGTTGAACCCTCG 99334723 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | |||| | ||||| || || ||||| ||||| ||||||||||| || ||| Sbjct 99334722 GACACTATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 99334663 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | || |||||||||||||| || || |||| ||||| | | ||||| || Sbjct 99334662 CAGAGGTTGATCTTTGCTGGTAAGCAGCTGGAAGATGGCCGTACTTTGTCGGACTACAAC 99334603 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||||||||| || || |||||||| || ||| | ||||| ||||| Sbjct 99334602 ATCCAAAAGGAGTCTACCCTTCATCTTGTGTTGAGACTTCGGGGTGG 99334556 Score = 122 bits (134), Expect = 1e-22 Identities = 164/227 (72%), Gaps = 1/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||| | ||||| | ||||| || | |||||||| || ||||||||||||||| | || Sbjct 128787187 ATGTAGATCTTCCTGAAGACCCTGATGGGCAAGACCATCACTCTTGAGGTTGAGCCCAGT 128787246 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | ||||| || || || |||||||| || || || || |||||| Sbjct 128787247 GACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCACCTGACCAG 128787306 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 | | | || || |||| || || || || ||||||| | ||||| | ||||| || Sbjct 128787307 CTGAGGCTGATATTTG-AGGCAAACAGCTGGAGGATGGCTGCACCCTGTCGGACTACAAC 128787365 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || || ||||| | || || || || |||| |||||||| Sbjct 128787366 ATCCAGAAAGAGTCCACCTTGCAACTGGTGCTGAGTCTGCGCGGTGG 128787412 Score = 105 bits (116), Expect = 8e-18 Identities = 126/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||| || ||||| || || |||||||| || ||||||||||| ||| | |||| | ||| Sbjct 149231842 CTTCGTGAAGACCCTGACGGGCAAGACCATCACTCTTGAGGTCGAGCCCAGTGACAACAT 149231783 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 | ||| | ||||| || || || |||||||| || || || || ||||||||| | || Sbjct 149231782 CGAGAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCACCTGACCAGCAGAGGCT 149231723 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 || ||||| | || || || ||||||| | ||||| | ||||| || Sbjct 149231722 GATATTTGCCAGCAAACAGCTGGAGGATGGCTGCACCCTGTCGGACTACAA 149231672 Score = 96.9 bits (106), Expect = 4e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 27402 TATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTC 27461 || |||||||||||| ||||| || ||| ||| || || ||||| ||||| ||| | Sbjct 104846065 TAAAATGCAAATCTTCAAGAAGACCCTGACCAACAAAACCATCACTCTAGAGGTGGAGCC 104846124 Query 27462 AGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGA 27521 |||| | ||| | || |||| || || || ||||| || ||||| || || || || Sbjct 104846125 CAGTGACACCATCGAGAACGTGAAAGCCAAGATCCAGGATAAAGAGGGCATCCCCCCTGA 104846184 Query 27522 CCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTA 27581 |||||| | | || |||||||| ||||| || || |||| | ||||| | || || Sbjct 104846185 CCAGCAAAGGTTCATCTTTGCTGGCAAGCAGCTGGAAGATGGCTGCACCCTCTCTGATTA 104846244 Query 27582 TAATGTCCAAAAGGAATC 27599 || |||| || || || Sbjct 104846245 CAACATCCAGAAAGAGTC 104846262 Score = 93.3 bits (102), Expect = 5e-14 Identities = 158/228 (69%), Gaps = 1/228 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCG-GCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||| || ||||| ||||| |||| | | || || || || || ||| |||| | Sbjct 31007932 ATGCAGATATTTGTGAAGACCCTTATGGAGAAAAACCATCACACTCGAGTTTGAACCCTC 31007873 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | || | |||| | ||||| || || ||| | || || ||| ||| ||| || || Sbjct 31007872 GGACACTATAGAAAATGTAAAGGCCAAGATCCAGAATAATGAAGGACTTCTTCCTGATCA 31007813 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 |||| | | || |||||||||||||| || || |||| |||| | | ||||| || Sbjct 31007812 GCAGAGGTTGATCTTTGCTGGTAAGCAGCTGGAAGATGGCTGTACTTTGTCTGACTACAA 31007753 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||| ||| || | ||||| || || ||| | |||| ||||| Sbjct 31007752 CATTCAAACGGAGTCTATCCTTCACCTTGTGTTGAGACTTCAGGGTGG 31007705 Score = 86.0 bits (94), Expect = 7e-12 Identities = 112/156 (72%), Gaps = 8/156 (5%) Strand=Plus/Plus Query 27477 AAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAAT 27536 |||| | ||||| || || ||||| ||| | ||||||||||| | |||||| | | || Sbjct 77711359 AAATATAAAGGCCAAGATCCAGGATAAGAAAGGAATTCCTCCTGGTCAGCAGAGGTTGAT 77711418 Query 27537 TTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGA 27596 |||||||| ||||| || || |||| ||||| || || | |||||||| Sbjct 77711419 CTTTGCTGGCAAGCAGCTGGAAGATGGCCGTAC--------TTTACAACATTCAAAAGGA 77711470 Query 27597 ATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || || |||||||| || ||| | ||||| ||||| Sbjct 77711471 GTCTACCCTTCATCTTGTGTTGAGACTTCGTGGTGG 77711506 >seq9 Length=107150856 Score = 143 bits (158), Expect = 3e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| || || |||||||| || ||||||||||| ||| | || Sbjct 80898670 ATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACTCTTGAGGTCGAGCCCAGT 80898611 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | ||||| || || || |||||||| || || || || |||||| Sbjct 80898610 GACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCACCTGACCAG 80898551 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || ||||| || || || | ||||||| | ||||| | ||||| || Sbjct 80898550 CAGAGGCTGATATTTGCCGGCAAACAGGTGGAGGATGGCCACACCCTCTCGGACTACAAC 80898491 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || || ||||| | || || || ||||||| |||||||| Sbjct 80898490 ATCCAGAAAGAGTCCACCTTGCACCTGGTGCTGCGTCTGCGCGGTGG 80898444 Score = 143 bits (158), Expect = 3e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| || || |||||||| || ||||||||||| ||| | || Sbjct 83841282 ATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACTCTTGAGGTCGAGCCCAGT 83841223 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | ||||| || || || |||||||| || || || || |||||| Sbjct 83841222 GACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCACCTGACCAG 83841163 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || || || || || || || ||||||| | ||||| | ||||| || Sbjct 83841162 CAGAGGCTGATATTCGCCGGCAAACAGCTGGAGGATGGCCACACCCTCTCGGACTACAAC 83841103 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || || ||||| | || || || ||||||| |||||||| Sbjct 83841102 ATCCAGAAAGAGTCCACCTTGCACCTGGTGCTGCGTCTGCGCGGTGG 83841056 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/233 (70%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || ||||| || ||||| ||||| ||||| || ||| | || || || |||| ||| | Sbjct 86262023 ATGATGCAGATTTTTGTGAAGACCCTTACAGGGAAGGCCATCACGCTCGAGGATGAACCC 86261964 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 || | || | ||| | ||| | || | |||| ||||| ||| ||| ||| || Sbjct 86261963 TCGGACACTATAGATAATGTAAAGTCCAAGACCTAGGATAAGGAAGGACTTC-TCCTGAT 86261905 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 |||||| | | || |||||||||||||| || || ||| ||||| | | ||||| Sbjct 86261904 CAGCAGAGGTTGATCTTTGCTGGTAAGCAGCTGGAAGATCGCCGTACTTTGTCTGACTAC 86261845 Query 27583 AATGTCCAAAAGGAATCCAC---TCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || | |||||||| || || || ||| || || ||| | ||||| ||||| Sbjct 86261844 AACATTCAAAAGGAGTCTACCCTTCCTCACCTTGTGTTGAGACTTCGTGGTGG 86261792 >seq13 Length=116904986 Score = 134 bits (148), Expect = 2e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| || || |||||||| || ||||||||||||||| | || Sbjct 35782956 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACTCTTGAGGTTGAGCCCAGT 35782897 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | ||||| || || || |||||||| || || || || |||||| Sbjct 35782896 GACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCACCTGACCAG 35782837 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || ||||| | || | || ||||||| || ||||| |||| || Sbjct 35782836 CAGAGGCTGATATTTGCCAGCAAAGAGCTGGAGGATGGCCGCACCCTGTTGCACTACAAC 35782777 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || || ||||| | | || || || |||| |||||||| Sbjct 35782776 ATCCAGAAAGAGTCCACCTTGTACCTGGTGCTGTGTCTGCGCGGTGG 35782730 >seq28 Length=148379591 Score = 105 bits (116), Expect = 8e-18 Identities = 150/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||||||||| | ||||| || ||||||||||| || || || ||| | ||| | | Sbjct 136136351 AATGCAAATCTTCATGAAGACCCTGACCGGCAAGACCATCACCCTAGAGATGGAGCCCAG 136136292 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | ||| ||| |||||| || || ||||| || ||||| |||| || ||||| Sbjct 136136291 TGAAACCATCAAGAATGTGAAGGGCAAGATCCAGGATAAAGAGGGCATTCACCCCGACCA 136136232 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 |||| | || || ||||| || | ||| || || |||| | ||||| | || || || Sbjct 136136231 GCAGAGGCTCATCTTTGCAGGCAGGCAGCTGGAAGATGGCTGCACCCTCTCTGATTACAA 136136172 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTC 27615 |||| || | || || || || || ||| Sbjct 136136171 CATCCAGAAAAAGTCGACCCTACACCTGGTC 136136141 Score = 98.7 bits (108), Expect = 1e-15 Identities = 145/204 (71%), Gaps = 1/204 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| |||||||| ||||| || ||||||||||| || || || ||||| ||| | | Sbjct 9098847 AATGCACATCTTTGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAG 9098788 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | || | | ||||||| || || ||||| || ||| ||||| || || || Sbjct 9098787 TGACACTATCGAGACCGTGAAGGCCAAGATCCAGGATAAAGAGTACATTCCCCCTGATCA 9098728 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 | || | || | |||||| || ||||| || || |||| | ||||| | || || || Sbjct 9098727 GTAGAGGCTCA-TTTTGCAGGCAAGCATCTGGAAGATGGCAGCACCCTCTCTGATTACAA 9098669 Query 27585 TGTCCAAAAGGAATCCACTCTTCA 27608 |||| || || || || || || Sbjct 9098668 CATCCAGAAAGACTCAACCCTGCA 9098645 >seq15 Length=89017189 Score = 105 bits (116), Expect = 8e-18 Identities = 161/228 (71%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || ||||| |||| || | || ||||| || || || ||| ||| | Sbjct 12733096 AATGCAGATTTTTGTGAAGATCCTAATGGGGAAGACCATCACGCTCAAGGCTGAACCCCT 12733155 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | | |||| | ||||| || | ||||| ||||| ||||||||||| || || Sbjct 12733156 GGACACTGTGTAAAATGTAAAGGCCAAGACCCAGGATAAGGAAGGAATTCCTCCTGATCA 12733215 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||| | || || |||||||||||||| || || |||| | || | | |||||||| Sbjct 12733216 GCACAGGCTGATCTTTGCTGGTAAGCAGCTGGAAGATGGCCATA-CTTCTTTGACTATAA 12733274 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||||||| | ||| |||||||| || ||| | |||| ||||| Sbjct 12733275 CATTCAAAAGGAGTTCACCCTTCATCTTGTGTTGAGCCTTCCTGGTGG 12733322 Score = 93.3 bits (102), Expect = 5e-14 Identities = 158/227 (70%), Gaps = 3/227 (1%) Strand=Plus/Plus Query 27408 GCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGA 27467 ||| || ||||| ||||| || || ||||| | || | |||||||| | || Sbjct 12347007 GCAGATTTTTGTGAAGACCATTCTGGGGAAGACCACTATGTTCGAGGTTGAACCCCTGGA 12347066 Query 27468 TAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCA 27527 | || | || | | ||||| || | ||||| ||||| ||||||||||| || ||||| Sbjct 12347067 CACTATAGAAAGTGTAAAGGCCAAGACCCAGGATAAGGAAGGAATTCCTCCTGATCAGCA 12347126 Query 27528 GCGTCTAATTTTTGCTGG--TAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 | | || || ||||| |||||| || || ||||| | || | | |||||| | Sbjct 12347127 CAGGATGATCTTCGCTGGTATAAGCAGCTGGAAGATGACCATA-CTTGTTGGACTATGAC 12347185 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||||||| | ||| |||||||| || ||| |||||| ||||| Sbjct 12347186 ATTCAAAAGGAGTTCACCCTTCATCTTGTGTTGAGTCTTCCTGGTGG 12347232 >seq1 Length=172151128 Score = 105 bits (116), Expect = 8e-18 Identities = 162/230 (70%), Gaps = 1/230 (0%) Strand=Plus/Minus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || ||||| || ||||| ||||| |||| || || || || | || ||||||| | Sbjct 144045495 ATGATGCAGATTTTTGTGAAGACCTTTACGGGAAAAACCATCAAGCTCAAGGTTGAACCC 144045436 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 || | || | |||| | ||||| || || ||||| ||||| ||||||||||| || Sbjct 144045435 TCGGACACTATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 144045376 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 ||||| | | || ||||| |||||||| || || |||| ||||| | | ||| Sbjct 144045375 GAGCAGAGATTGATCTTTGCGGGTAAGCAGCTGGAAGATGGCCGTACTTTGTCTTTCTAC 144045316 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || | |||||||| || || |||||||| | ||| | ||| | ||||| Sbjct 144045315 AACATTCAAAAGGAGTCTACCCTTCATCTTGGGTTGAGACTT-GTGGTGG 144045267 >seq16 Length=96704406 Score = 98.7 bits (108), Expect = 1e-15 Identities = 154/218 (71%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 |||||| ||||| |||| || || || || || || |||||||| || || | | Sbjct 4425800 CTTTGTGAAGACCTTTACGGGGAAAACCATCACACTGGAGGTTGAATCCTCGGACACTA- 4425858 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 | |||| | ||||| || | ||||| ||||| |||||||||| || |||||| | || Sbjct 4425859 -GAAAATGTAAAGGCCAAGACCCAGGATAAGGAAAGAATTCCTCCTGATCAGCAGAGGCT 4425917 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593 || ||||||||||| || || || ||||| | ||| | | ||||| | | ||||| Sbjct 4425918 GATCTTTGCTGGTAAACAGCTGGAAGATGACCATACTTTCTCTGACTACAGCATTCAAAA 4425977 Query 27594 GGAATCCACTCTTCA-TCTAGTCTTGCGTCTTCGCGGT 27630 || || || ||| | || || ||| | ||||| ||| Sbjct 4425978 AGAGTCTACCCTTTAGCCTTGTGTTGAGACTTCGTGGT 4426015 >seq8 Length=167013402 Score = 96.9 bits (106), Expect = 4e-15 Identities = 160/231 (69%), Gaps = 10/231 (4%) Strand=Plus/Plus Query 27401 CTATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGT 27460 ||| | |||| |||||||| ||||| |||||| | ||||| || || || |||||||| Sbjct 14198926 CTACAGTGCAGATCTTTGTGAAGACCCTTACCAGGAAGACCATCACGCTAGAGGTTGAAC 14198985 Query 27461 CAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAG 27520 | || | | | |||| | ||||| || | ||||||| ||||||| | Sbjct 14198986 CCTCAGACACTAAAGAAAATGTAAAGGCCAAGACCCAGGACA---------TTCCTCCTG 14199036 Query 27521 ACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACT 27580 | ||| || | | || ||||||||||| || || || ||| |||| | | |||| Sbjct 14199037 ATCAG-AGAGGTTGATCTTTGCTGGTAAACAGCTGGAAGATAGCTGTACTTTGTCTGACT 14199095 Query 27581 ATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTG 27631 | | | |||||||| || ||||||||||| || ||| | ||||| |||| Sbjct 14199096 ACACCATTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAGACTTCGTGGTG 14199146 Score = 95.1 bits (104), Expect = 1e-14 Identities = 117/160 (73%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || || || | |||| | |||||||| || ||||| |||||| |||||||||| |||||| Sbjct 32070863 GACAGTATAGAAAATGTAAAGGCTAAGATCCAGGATAAGGAGAGAATTCCTCCTGACCAG 32070922 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 | | | || | ||||||||||||||| || || || | ||| | | ||||| || Sbjct 32070923 CTGAGGCTGAATTTTGCTGGTAAGCAGCTGGAAGACGGCTGTAATTTGTCTGACTACAAC 32070982 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTC 27625 | ||| |||| |||| |||||| || ||| | |||| Sbjct 32070983 ATTCAATAGGATTCCATCCTTCATTGTGTGTTGAGACTTC 32071022 >seq21 Length=68186955 Score = 89.7 bits (98), Expect = 6e-13 Identities = 85/109 (78%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 64725 AGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCT 64784 ||| ||||| ||| |||||||||||||| ||||| ||||| | | || |||||||| Sbjct 4933714 AGCCTTTGCTGCTGTAGAAGGAATTTTCTTCTCTGGATCATTTGCTGCGATATTCTGGCT 4933655 Query 64785 AAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATC 64833 ||| ||| | ||||| ||||| || ||| | ||||| || || |||||| Sbjct 4933654 AAAGAAGAGAGGCCTCATGCCTGGACTGACTTTTTCAAATGAACTGATC 4933606 >seq26 Length=50160631 Score = 86.0 bits (94), Expect = 7e-12 Identities = 109/149 (73%), Gaps = 1/149 (1%) Strand=Plus/Minus Query 27484 AAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCT 27543 ||||| || || ||||| ||||| |||||||| || || | ||| ||| | | ||||| Sbjct 40959192 AAGGCCAAGATCCAGGATAAGGAAGGAATTCCGCCTGATCGTCAGAGTCGA-TCGTTGCT 40959134 Query 27544 GGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACT 27603 |||||||| || || ||||| | ||| | | ||||| || | |||| ||| ||||| Sbjct 40959133 GGTAAGCAGCTGGAAGATGACCATACTTTGTCTGACTACAACATTCAAATGGAGTCCACC 40959074 Query 27604 CTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||||| | || ||| | ||| ||||| Sbjct 40959073 CTTCATGTTGTGTTGAGATTTCATGGTGG 40959045 >seq11 Length=111406228 Score = 82.4 bits (90), Expect = 9e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 32125 ACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGAGCCA 32184 || ||||| || | |||||||| ||||| || || ||| | ||||| || |||| Sbjct 8232886 ACTATTGTGAATTTGGCTCAGAATTTTGTGGGCAGTAACAACATTAACTTGCTTCAGCCC 8232945 Query 32185 TCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTACATC 32244 ||| |||||||| || ||||| ||||||||||||||||| ||| | ||||| || Sbjct 8232946 ATTGGTCAGTTTGGAACTCGGCTTCATGGTGGCAAGGATGCTGCAAGCCCTCGTTATATT 8233005 Query 32245 TTCAC 32249 ||||| Sbjct 8233006 TTCAC 8233010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570292000360720