Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20pahari_20[refseq_20GCF_5F900095145.1_202017-04-28] 2,581 sequences; 2,475,012,951 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq4 187 6e-42 seq9 158 3e-33 seq17 145 2e-29 seq13 145 2e-29 seq1 143 6e-29 seq28 136 9e-27 seq15 132 1e-25 seq6 131 4e-25 seq16 127 5e-24 seq8 111 4e-19 seq23 105 2e-17 seq26 89.7 1e-12 seq1358 86.0 1e-11 >seq4 Length=164141553 Score = 187 bits (206), Expect = 6e-42 Identities = 174/221 (79%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 |||||||| | ||||| ||||| || ||||| ||||||||||| || |||| | || Sbjct 18056549 CGAAGTCTCAACACAAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCCGACAAAGTA 18056608 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | ||||||||||||||||| || || ||||| | | || || |||||||||| |||| Sbjct 18056609 CGGCCATCTTCCAGCTGCTTACCAGCAAAGATCAACCTCTGCTGATCAGGAGGAATTCCT 18056668 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 ||||| ||||||||||| || || ||||| || ||||| ||| |||||||||||| Sbjct 18056669 TCCTTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGC 18056728 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || |||||||| || ||||| ||||| | |||||| Sbjct 18056729 GTGATGGTTTTTCCCGTAAGGGTCTTCACAAAAATCTGCAT 18056769 Score = 187 bits (206), Expect = 6e-42 Identities = 174/221 (79%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 |||||||| | ||||| ||||| || ||||| ||||||||||| || |||| | || Sbjct 99334562 CGAAGTCTCAACACAAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCCGACAAAGTA 99334621 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | ||||||||||||||||| || || ||||| | | || || |||||||||| |||| Sbjct 99334622 CGGCCATCTTCCAGCTGCTTACCAGCAAAGATCAACCTCTGCTGATCAGGAGGAATTCCT 99334681 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 ||||| ||||||||||| || || ||||| || ||||| ||| |||||||||||| Sbjct 99334682 TCCTTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGC 99334741 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || |||||||| || ||||| ||||| | |||||| Sbjct 99334742 GTGATGGTTTTTCCCGTAAGGGTCTTCACAAAAATCTGCAT 99334782 Score = 143 bits (158), Expect = 6e-29 Identities = 165/221 (75%), Gaps = 1/221 (0%) Strand=Plus/Plus Query 210895 GAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCC 210954 ||||||| | ||||||||||| | ||||| |||| ||||| || || | | || | Sbjct 31007712 GAAGTCTCAACACAAGGTGAAGGATAGACTCCGTTTGAATGTTGTAGTCAGACAAAGTAC 31007771 Query 210955 TTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTT 211014 ||||||||||||||||| || || ||||| | | || || |||||| ||| ||||| Sbjct 31007772 AGCCATCTTCCAGCTGCTTACCAGCAAAGATCAACCTCTGCTGATCAGGAAGAAGTCCTT 31007831 Query 211015 CCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAG 211074 | || | ||||||||| || || ||||| || ||||| ||| ||||| |||||| | Sbjct 31007832 CATTATTCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAAACTCGAGTG 31007891 Query 211075 TGATCGTCTTTC-CCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||| || |||| || | || ||||| ||||| | |||||| Sbjct 31007892 TGATGGTTTTTCTCCATAAGGGTCTTCACAAATATCTGCAT 31007932 Score = 141 bits (156), Expect = 2e-28 Identities = 150/198 (76%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 210921 GACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCG 210980 |||||||| |||||||| ||||| | ||||| | |||||||||||||||||||| || Sbjct 104846262 GACTCTTTCTGGATGTTGTAATCAGAGAGGGTGCAGCCATCTTCCAGCTGCTTGCCAGCA 104846203 Query 210981 AAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACG 211040 ||||| | | ||| |||||||| || | || || || ||||||||||| ||||||| Sbjct 104846202 AAGATGAACCTTTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGGATCTTGGCTTTCACG 104846143 Query 211041 TTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTT 211100 || |||||||||||| | || ||||| |||||||| || || || || ||||| Sbjct 104846142 TTCTCGATGGTGTCACTGGGCTCCACCTCTAGAGTGATGGTTTTGTTGGTCAGGGTCTTC 104846083 Query 211101 ACAAACACCTGCATTTTA 211118 || | ||||||||| Sbjct 104846082 TTGAAGATTTGCATTTTA 104846065 Score = 140 bits (154), Expect = 8e-28 Identities = 166/224 (74%), Gaps = 1/224 (0%) Strand=Plus/Minus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 || || || || || || || | ||||||||||| |||||||| || |||| ||||| Sbjct 128787406 CGCAGACTCAGCACCAGTTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCCGACAGGGTG 128787347 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | ||||| |||||||| |||||| | || || || | | |||||||| || | ||| Sbjct 128787346 CAGCCATCCTCCAGCTGTTTGCCT-CAAATATCAGCCTCAGCTGGTCAGGTGGGATGCCT 128787288 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 |||||||| |||||||| || || || |||||||||||| | |||||||| ||| Sbjct 128787287 TCCTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCAACCTCAAGA 128787228 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||||| ||||| ||| | || ||||| | || | || ||| || Sbjct 128787227 GTGATGGTCTTGCCCATCAGGGTCTTCAGGAAGATCTACATGTT 128787184 Score = 122 bits (134), Expect = 2e-22 Identities = 132/175 (75%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 210895 GAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCC 210954 ||||||| || ||| | | ||||||||||| ||||| |||||| | || | | || Sbjct 23451922 GAAGTCTCAGCACAGGAGGCAGAGTGGACTCCTTTTGAATGTTACAGTCAGACAAAGTAT 23451981 Query 210955 TTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTT 211014 ||||||| |||||||||||| || ||||| || | || || |||| ||||| ||||| Sbjct 23451982 GGCCATCTTTCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGAAGGAATTCCTT 23452041 Query 211015 CCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 |||| ||||||||||| || || ||||| || ||||| ||| || |||||| Sbjct 23452042 CCTTATCCTGGATCTTGACCTTTACATTTTCTATAGTGTCTGAGGGTTTAACCTC 23452096 Score = 122 bits (134), Expect = 2e-22 Identities = 141/191 (74%), Gaps = 8/191 (4%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||||||||| | ||||| ||||| || ||||| ||||| ||||| ||| || Sbjct 77711501 ACGAAGTCTCAACACAAGATGAAGGGTAGACTCCTTTTGAATGTTGTAAA--------GT 77711450 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | |||||||||||||||||||| || ||||| | | || || ||||||||| ||| Sbjct 77711449 ACGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGACCAGGAGGAATTCC 77711390 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 || ||| ||||||||||| || | ||||| || ||||| ||| |||||||||||| Sbjct 77711389 TTTCTTATCCTGGATCTTGGCCTTTATATTTTCTATAGTGTCTGAGGGTTCAACCTCGAG 77711330 Query 211073 AGTGATCGTCT 211083 ||| |||| Sbjct 77711329 CATGAGGGTCT 77711319 Score = 118 bits (130), Expect = 2e-21 Identities = 158/221 (71%), Gaps = 8/221 (4%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGT--------TATAATCC 210944 ||| || | ||| || ||||| | ||||||||| | ||| ||| | || ||| Sbjct 149231621 ACGCAGACGTAGCACCAGGTGCAAGGTGGACTCTCTCTGGGTGTCTGGGTGTTGTAGTCC 149231680 Query 210945 GCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGA 211004 | ||||| | ||||| |||||||| |||| || || || || | || |||||||| Sbjct 149231681 GACAGGGTGCAGCCATCCTCCAGCTGTTTGCTGGCAAATATCAGCCTCTGCTGGTCAGGT 149231740 Query 211005 GGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCA 211064 || | ||||||||||| |||||||| || || || |||||| ||||| | || Sbjct 149231741 GGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTCTCGATGTTGTCACTGGGCTCG 149231800 Query 211065 ACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 ||||| |||||||| ||||| ||||| || ||||| || || Sbjct 149231801 ACCTCAAGAGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 149231841 >seq9 Length=107150856 Score = 158 bits (174), Expect = 3e-33 Identities = 164/215 (76%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| | ||||||||||| |||||||| || |||| ||||| ||||| Sbjct 83841071 AGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCCGAGAGGGTGTGGCCATCC 83841130 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||| ||||| ||||| || || | || |||||||| || | ||||||||||| Sbjct 83841131 TCCAGCTGTTTGCCGGCGAATATCAGCCTCTGCTGGTCAGGTGGGATGCCTTCCTTGTCT 83841190 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || |||||||||||| | || ||||| |||||||| ||| Sbjct 83841191 TGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCGACCTCAAGAGTGATGGTC 83841250 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || ||||| || ||||| || || | |||||| || Sbjct 83841251 TTGCCCGTCAGGGTCTTCACGAAGATCTGCATGTT 83841285 Score = 149 bits (164), Expect = 1e-30 Identities = 162/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| | ||||||||||| |||||||| || |||| ||||| ||||| Sbjct 80898459 AGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCCGAGAGGGTGTGGCCATCC 80898518 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||| ||| ||||| || || || || | || |||||||| || | ||||||||||| Sbjct 80898519 TCCACCTGTTTGCCGGCAAATATCAGCCTCTGCTGGTCAGGTGGGATGCCTTCCTTGTCT 80898578 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || |||||||||||| | || ||||| |||||||| ||| Sbjct 80898579 TGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCGACCTCAAGAGTGATGGTC 80898638 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || ||||| || ||||| || || | |||||| || Sbjct 80898639 TTGCCCGTCAGGGTCTTCACGAAGATCTGCATGTT 80898673 Score = 134 bits (148), Expect = 3e-26 Identities = 166/225 (74%), Gaps = 4/225 (2%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGA---GTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 ||||||||| | ||||||||| || || ||||| ||||| ||||| || || | | Sbjct 86261797 ACGAAGTCTCAACACAAGGTGAGGAAGGGTAGACTCCTTTTGAATGTTGTAGTCAGACAA 86261856 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 || | | ||||||||||||||| || || ||||| | | || || |||||| ||| Sbjct 86261857 AGTACGGCGATCTTCCAGCTGCTTACCAGCAAAGATCAACCTCTGCTGATCAGGA-GAAG 86261915 Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 ||||||||| |||| | |||| || || || || || ||||| ||| |||| |||| Sbjct 86261916 TCCTTCCTTATCCTAGGTCTTGGACTTTACATTATCTATAGTGTCCGAGGGTTCATCCTC 86261975 Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||| ||||| | ||| || || || ||||| ||||| | |||||| Sbjct 86261976 GAGCGTGATGGCCTTCCCTGTAAGGGTCTTCACAAAAATCTGCAT 86262020 Score = 127 bits (140), Expect = 5e-24 Identities = 163/225 (72%), Gaps = 5/225 (2%) Strand=Plus/Plus Query 210895 GAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCC 210954 ||||||| | ||||| ||||| || ||||| ||||| ||| || || | | || | Sbjct 72218613 GAAGTCTCAACACAAGATGAAGGGTAGACTCCTTTTGAGGGTTGTAGTCAGACAAAGTAC 72218672 Query 210955 TTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTT 211014 ||||||||||||||||| || || ||||| | | || || |||||||||| ||||| Sbjct 72218673 AGCCATCTTCCAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGATCAGGAGGAAGTCCTT 72218732 Query 211015 CCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAG 211074 |||| ||||||||||| || || ||||| || ||||| ||| ||||||| ||| Sbjct 72218733 CCTTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCTGAGGGCTCAACCTTGAGCA 72218792 Query 211075 TGATCGTCTT-----TCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||| || || ||| | || | ||| ||||| | |||||| Sbjct 72218793 TGATGGTTTTCCCCAACCCCTAAGGGACTTCACAAAAATCTGCAT 72218837 >seq17 Length=88915856 Score = 145 bits (160), Expect = 2e-29 Identities = 161/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| | ||||||||||| ||| |||| ||||| | ||||| | ||||| Sbjct 64219999 AGCACCAGGTGCAAGGTGGACTCTTTCTGGGTGTTGTAATCAGACAGGGTGCAGCCATCC 64220058 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||| ||||| || || || || | || |||||||| || | ||||||||||| Sbjct 64220059 TCCAGCTGTTTGCCGGCAAATATCAGCCTCTGCTGGTCAGGTGGGAGGCCTTCCTTGTCT 64220118 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || |||||||| ||| | || || || |||||||| ||| Sbjct 64220119 TGGATCTTGGCCTTGACATTCTCGATGGTATCACTGGGCTCTACTTCAAGAGTGATGGTC 64220178 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || ||| | || ||||| ||||| | |||||| || Sbjct 64220179 TTGCCCATCAGGGTCTTCACAAAGATCTGCATGTT 64220213 Score = 100 bits (110), Expect = 7e-16 Identities = 120/162 (74%), Gaps = 1/162 (1%) Strand=Plus/Plus Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 ||| |||||||||||||||| || ||||| || | || |||||||| || | || || Sbjct 31247675 CCACCTTCCAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCT 31247734 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 || ||||||||||| ||| | ||| || ||||| ||| | || ||||| || ||| Sbjct 31247735 TTATCCTGGATCTTGGTTTTTATGTTCTCCATGGTATCACTGGGCTCCACCTCCAGGGTG 31247794 Query 211077 ATCGTCTTT-CCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || |||||| || || || ||||||| || | ||||||| Sbjct 31247795 ATGGTCTTTGCCAGTCAGGGTCTTTATGAAGATTAGCATTTT 31247836 Score = 93.3 bits (102), Expect = 1e-13 Identities = 143/202 (71%), Gaps = 4/202 (2%) Strand=Plus/Plus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 |||||||| || ||||| | | || | ||||| ||||| |||||||| | | | Sbjct 28740905 GTGGACTCGTTCCGGATGAAACAGTCAGACAGGGTGAAGCCATCCTCCAGCTGTTCGTCA 28740964 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 |||| | || | ||| ||||||||||| | ||||| |||| |||||||| || Sbjct 28740965 TCGAATACCAGACTTTGCTGGTCAGGAGGGAGGCCTTCACTGTCTTGGATCTTGGCCTTG 28741024 Query 211038 ACGTTTTCGATGGTGTCA--GAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAG 211095 || || | |||||||||| | |||| ||||| |||||||| |||| || | || | Sbjct 28741025 ACATTCTTGATGGTGTCACTGGGCTT--GACCTCAAGAGTGATGGTCTCGCCTATCAGGG 28741082 Query 211096 TCTTTACAAACACCTGCATTTT 211117 |||| || || | |||||| || Sbjct 28741083 TCTTCACGAAGATCTGCATGTT 28741104 Score = 87.8 bits (96), Expect = 4e-12 Identities = 71/86 (83%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || || |||||||| |||||||| ||||| | ||||| | |||||| Sbjct 30590711 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAGAGGGTGCGGCCATCT 30590652 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAG 210988 |||||||||||||| || ||||| || Sbjct 30590651 TCCAGCTGCTTGCCGGCAAAGATGAG 30590626 >seq13 Length=116904986 Score = 145 bits (160), Expect = 2e-29 Identities = 152/200 (76%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 ||||||||||| |||||||| || | | ||||| | ||||| ||||||| |||| Sbjct 35782760 GTGGACTCTTTCTGGATGTTGTAGTGCAACAGGGTGCGGCCATCCTCCAGCTCTTTGCTG 35782819 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 || || || || | || |||||||| || | ||||||||||| |||||||| || Sbjct 35782820 GCAAATATCAGCCTCTGCTGGTCAGGTGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTG 35782879 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 || || |||||||||||| | |||||||| |||||||| ||||| ||||| || ||| Sbjct 35782880 ACATTCTCGATGGTGTCACTGGGCTCAACCTCAAGAGTGATGGTCTTGCCCGTCAGGGTC 35782939 Query 211098 TTTACAAACACCTGCATTTT 211117 || ||||| | |||||| || Sbjct 35782940 TTCACAAAGATCTGCATGTT 35782959 >seq1 Length=172151128 Score = 143 bits (158), Expect = 6e-29 Identities = 163/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 210896 AAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCT 210955 |||||| | |||| ||||| || ||||| ||||| ||||| || | | || | Sbjct 144045274 AAGTCTCAACCCAAGATGAAGGGTAGACTCCTTTTGAATGTTGTAGAAAGACAAAGTACG 144045333 Query 210956 TCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTC 211015 ||||||||||||||||| || || ||||| | | || | |||||||||| |||||| Sbjct 144045334 GCCATCTTCCAGCTGCTTACCCGCAAAGATCAATCTCTGCTCATCAGGAGGAATTCCTTC 144045393 Query 211016 CTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGT 211075 ||| ||||||||||| || || ||||| || ||||| ||| |||||||| ||| | Sbjct 144045394 CTTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTTGAGCTT 144045453 Query 211076 GATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||| || |||||||| | ||||| ||||| | |||||| Sbjct 144045454 GATGGTTTTTCCCGTAAAGGTCTTCACAAAAATCTGCAT 144045492 Score = 113 bits (124), Expect = 1e-19 Identities = 151/209 (72%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 210907 CAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCA 210966 |||| |||| || ||||| ||||| ||||| || || | | || | || ||||||| Sbjct 19506339 CAAGACGAAGGGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGGCCGTCTTCCA 19506280 Query 210967 GCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGA 211026 ||||||| | || |||| || | || | |||||| | | ||||||||| ||||||| Sbjct 19506279 GCTGCTTACA-GCAAAGAGCAGCCTCTGCTAATCAGGACGGATTCCTTCCTTATCCTGGA 19506221 Query 211027 TCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTC 211086 ||| || || |||| | ||||| ||| |||||||||||| ||||| ||||| | Sbjct 19506220 CCTTGGCCTTTACAGTTTCTGTAGTGTCCGAGGGTTCAACCTCGAGTGTGATGGTCTTCC 19506161 Query 211087 CCGTGAGAGTCTTTACAAACACCTGCATT 211115 | | || ||||| ||||| ||||||| Sbjct 19506160 CAATAAGGGTCTTCACAAAAGTCTGCATT 19506132 >seq28 Length=148379591 Score = 136 bits (150), Expect = 9e-27 Identities = 159/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || || |||| ||| |||||||| ||||| | ||||| | |||||| Sbjct 136136139 AGGACCAGGTGTAGGGTCGACTTTTTCTGGATGTTGTAATCAGAGAGGGTGCAGCCATCT 136136198 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||||||| ||||||| ||||| || | || ||||| || ||| || || || ||| Sbjct 136136199 TCCAGCTGCCTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGTGAATGCCCTCTTTATCC 136136258 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| ||||| || | |||||| ||| | || | ||| || ||||| ||| Sbjct 136136259 TGGATCTTGCCCTTCACATTCTTGATGGTTTCACTGGGCTCCATCTCTAGGGTGATGGTC 136136318 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || || || || ||||| | || | |||||||| Sbjct 136136319 TTGCCGGTCAGGGTCTTCATGAAGATTTGCATTTT 136136353 Score = 132 bits (146), Expect = 1e-25 Identities = 158/212 (75%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCC 210965 ||||| || || || || ||||| |||||||| ||||| | ||||| || ||||||||| Sbjct 9098640 ACAAG-TGCAGGGTTGAGTCTTTCTGGATGTTGTAATCAGAGAGGGTGCTGCCATCTTCC 9098698 Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGG 211025 || ||||||||||| || || || | | || ||||| |||| || || |||||| Sbjct 9098699 AGATGCTTGCCTGC-AAAATGAGCCTCTACTGATCAGGGGGAATGTACTCTTTATCCTGG 9098757 Query 211026 ATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTT 211085 ||||| |||||| | ||||| |||||| | || ||||| || ||||| ||||| Sbjct 9098758 ATCTTGGCCTTCACGGTCTCGATAGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 9098817 Query 211086 CCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || || || ||||| ||||| | |||||||| Sbjct 9098818 CCGGTCAGGGTCTTCACAAAGATGTGCATTTT 9098849 Score = 120 bits (132), Expect = 7e-22 Identities = 135/177 (76%), Gaps = 3/177 (2%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || || |||| ||| |||||||| ||||| | ||||| || |||||| Sbjct 9099120 AGGACTAGGTGCAGGGTCGACTTTTTCTGGATGTTGTAATCAGAGAGGGTGCTGCCATCT 9099061 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCA-GGAGGAACTCCTTCCTTGTC 211021 ||||||||||||||||| || || || | || |||||| |||||| || || || || Sbjct 9099060 TCCAGCTGCTTGCCTGC-AAAATGAGCCTCTGCTGGTCAGGGAGGATAACC-TCTTTATC 9099003 Query 211022 CTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 |||||||||| ||||| || | ||||| |||| | || ||||| || || || Sbjct 9099002 CTGGATCTTTGCCTTCACATTCTTGATGGAGTCACTGGGCTCCACCTCCAGGGTAAT 9098946 >seq15 Length=89017189 Score = 132 bits (146), Expect = 1e-25 Identities = 164/222 (74%), Gaps = 3/222 (1%) Strand=Plus/Minus Query 210895 GAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGG-GTC 210953 |||| || | ||||| ||||| ||| |||| ||||| |||||||| || ||| || Sbjct 12733315 GAAGGCTCAACACAAGATGAAGGGTGAACTCCTTTTGAATGTTATAGTCA--AAGAAGTA 12733258 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 ||||||||||||||||| || || ||||| || | || || |||||||||| |||| Sbjct 12733257 TGGCCATCTTCCAGCTGCTTACCAGCAAAGATCAGCCTGTGCTGATCAGGAGGAATTCCT 12733198 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 ||||| |||||| |||| || || |||| | ||||| | |||| ||| ||| Sbjct 12733197 TCCTTATCCTGGGTCTTGGCCTTTACATTTTACACAGTGTCCAGGGGTTCAGCCTTGAGC 12733138 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 ||||| ||||| ||| | || |||| ||||| | ||||||| Sbjct 12733137 GTGATGGTCTTCCCCATTAGGATCTTCACAAAAATCTGCATT 12733096 Score = 111 bits (122), Expect = 4e-19 Identities = 159/221 (72%), Gaps = 5/221 (2%) Strand=Plus/Minus Query 210895 GAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCG-CAAGGGTC 210953 |||| || | ||||| ||||| ||| |||| ||||| |||| ||| ||| |||| | Sbjct 12347225 GAAGACTCAACACAAGATGAAGGGTGAACTCCTTTTGAATGTCATAGTCCAACAAGTATG 12347166 Query 210954 CTTCCATCTTCCAGCTGCTTG--CCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTC 211011 | |||||||||||||||| || |||||||| | | || || |||||||||| || Sbjct 12347165 GT--CATCTTCCAGCTGCTTATACCAGCGAAGATCATCCTGTGCTGATCAGGAGGAATTC 12347108 Query 211012 CTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGA 211071 ||||||| |||||| |||| || || |||| || ||||| | ||||||||||| Sbjct 12347107 CTTCCTTATCCTGGGTCTTGGCCTTTACACTTTCTATAGTGTCCAGGGGTTCAACCTCGA 12347048 Query 211072 GAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGC 211112 | | ||||| ||| | ||||| ||||| | |||| Sbjct 12347047 ACATAGTGGTCTTCCCCAGAATGGTCTTCACAAAAATCTGC 12347007 >seq6 Length=146485248 Score = 131 bits (144), Expect = 4e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 210891 CAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGG 210950 ||| | ||||| | ||||| ||||| ||||||| ||||| ||||| || || | | Sbjct 104811137 CAATGGAGTCTCAACACAAGATGAAGGATGGACTCCTTTTGAATGTTGTAGTCAGACAAA 104811078 Query 210951 GTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACT 211010 | | |||||||| ||||||||||| || ||||| | | || || |||||||||| | Sbjct 104811077 ATACAGCCATCTTCTAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGATCAGGAGGAATT 104811018 Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 | |||||| ||||||||||| || || ||||| || ||||| || ||||||| | Sbjct 104811017 CTTTCCTTATCCTGGATCTTGACCTTTACATTTTCTATAGTGTCCAAGGGTTCAACCCCA 104810958 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 || ||||| ||||| ||| | | |||| ||||| Sbjct 104810957 AGTGTGATGGTCTTCCCCATAATTCTCTTCACAAA 104810923 >seq16 Length=96704406 Score = 127 bits (140), Expect = 5e-24 Identities = 158/214 (74%), Gaps = 3/214 (1%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGG-TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGG 210951 ||||||||| | |||||| | ||| || ||||||||||| ||| | || || | | | Sbjct 4426012 ACGAAGTCTCAACACAAGGCTAAAGGGTAGACTCTTTTTGAATGCTGTAGTCAGAGAAAG 4425953 Query 210952 TCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTC 211011 | ||||||||||||| || || || ||||| || | || || |||||||||| || Sbjct 4425952 TATGGTCATCTTCCAGCTGTTTACCAGCAAAGATCAGCCTCTGCTGATCAGGAGGAATTC 4425893 Query 211012 CTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGA 211071 |||||| |||||| |||| || || ||||| | ||||| ||| ||||||||| | Sbjct 4425892 TTTCCTTATCCTGGGTCTTGGCCTTTACATTTTC--TAGTGTCCGAGGATTCAACCTCCA 4425835 Query 211072 GAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 | ||||| || || ||||| | ||||| ||||| Sbjct 4425834 GTGTGATGGTTTTCCCCGTAAAGGTCTTCACAAA 4425801 >seq8 Length=167013402 Score = 111 bits (122), Expect = 4e-19 Identities = 157/221 (71%), Gaps = 10/221 (5%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||||||||| | ||||| |||||||| ||||| ||||| ||| | || || | | || Sbjct 14199142 ACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATGGTGTAGTCAGACAAAGT 14199083 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | | |||||||||||| || || || ||||| | | | || |||||||||| Sbjct 14199082 ACAGCTATCTTCCAGCTGTTTACCAGCAAAGATCA-ACCTCTCTGATCAGGAGGAA---- 14199028 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||||| |||| || || ||||| | ||||| ||| ||||||||| || Sbjct 14199027 -----TGTCCTGGGTCTTGGCCTTTACATTTTCTTTAGTGTCTGAGGGTTCAACCTCTAG 14198973 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCA 211113 ||||| ||||| | || || ||||| ||||| | ||||| Sbjct 14198972 CGTGATGGTCTTCCTGGTAAGGGTCTTCACAAAGATCTGCA 14198932 >seq23 Length=89631738 Score = 105 bits (116), Expect = 2e-17 Identities = 111/146 (76%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 210969 TGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATC 211028 ||||| || || ||||| | || ||||| |||||||||| ||||||||| ||||||||| Sbjct 69181451 TGCTTACCAGCAAAGATCAAGCTCTGTTGATCAGGAGGAATTCCTTCCTTATCCTGGATC 69181510 Query 211029 TTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCC 211088 || || || ||||| || ||||| || |||||||||||| |||| ||||| || Sbjct 69181511 TTGATCTTTACATTTTCTATAGTGTCCAAGAGTTCAACCTCGAGCATGATGGTCTTCCCT 69181570 Query 211089 GTGAGAGTCTTTACAAACACCTGCAT 211114 | || |||| ||||| |||||| Sbjct 69181571 ATAAGGCTCTTCACAAAAGTCTGCAT 69181596 Score = 86.0 bits (94), Expect = 1e-11 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 ||||||||||| |||||||| || || || |||||||||||| | || ||||| Sbjct 85175431 CCTTCCTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCGACCTCA 85175490 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 |||||||| ||||| ||||| || ||||| || || | |||||| || Sbjct 85175491 AGAGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCATGTT 85175537 >seq26 Length=50160631 Score = 89.7 bits (98), Expect = 1e-12 Identities = 158/229 (69%), Gaps = 10/229 (4%) Strand=Plus/Plus Query 210895 GAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCC 210954 ||| ||| | |||| ||||| |||||||| |||| ||||| || || | | || Sbjct 40959052 GAAATCTCAACACAACATGAAGGGTGGACTCCATTTGAATGTTGTAGTCAGACAAAGTAT 40959111 Query 210955 TTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTT 211014 |||||||||||||||| || || | ||| | | || | ||||| |||| ||||| Sbjct 40959112 GGTCATCTTCCAGCTGCTTACCAGCAACGAT-CGACTCTGACGATCAGGCGGAATTCCTT 40959170 Query 211015 CCTTGTCCTGGATCT-----TTTG----TTTCACGTTTTCGATGGTGTCAGAGCTTTCAA 211065 |||| |||||||||| |||| ||| |||| || |||| || |||| Sbjct 40959171 CCTTATCCTGGATCTTGGCCTTTGCATTTTTTTTTTTTTTTATAGTGTTGGAAGGGTCAA 40959230 Query 211066 CCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 | || || ||||| ||||| ||| |||||||| ||||| | | |||| Sbjct 40959231 CTTCAAGCGTGATGGTCTTCCCCACAAGAGTCTTCACAAAAATCAGCAT 40959279 >seq1358 Length=18073 Score = 86.0 bits (94), Expect = 1e-11 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 210993 TGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTG 211052 || |||||||| || | || || || ||||||||||| ||||| || |||||| || Sbjct 12185 TGCTGGTCAGGGGGGATGCCCTCTTTTTCCTGGATCTTGCCCTTCACATTCTCGATGATG 12126 Query 211053 TCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGC 211112 ||| | || ||||| || ||||| ||||| | || || ||||| ||||||| |||| Sbjct 12125 TCACTGGGCTCCACCTCTAGGGTGATGGTCTTGCTGGTCAGGGTCTTCACAAACATCTGC 12066 Query 211113 ATTTT 211117 ||||| Sbjct 12065 ATTTT 12061 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159113667930065