Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20pahari_20[refseq_20GCF_5F900095145.1_202017-04-28] 2,581 sequences; 2,475,012,951 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq9 172 1e-37 seq17 154 3e-32 seq13 149 1e-30 seq4 141 2e-28 seq1 123 5e-23 seq28 107 4e-18 seq6 100 6e-16 seq12 98.7 2e-15 seq23 91.5 3e-13 seq27 89.7 1e-12 seq20 89.7 1e-12 seq8 89.7 1e-12 seq11 87.8 4e-12 >seq9 Length=107150856 Score = 172 bits (190), Expect = 1e-37 Identities = 176/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| ||||| || || ||||| || || ||| ||||| |||||||||||||| | Sbjct 80898444 CCACCGCGCAGACGCAGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCCGAG 80898503 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||| |||||||||| | ||||| |||||||| |||| | || |||||| || Sbjct 80898504 AGGGTGTGGCCATCCTCCACCTGTTTGCCGGCAAATATCAGCCTCTGCTGGTCAGGTGGG 80898563 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || ||||||||||||||||| || || || | ||||| ||||| | ||||| Sbjct 80898564 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCGACC 80898623 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || |||||||| ||||| ||||||| ||||| ||||| |||||||| || Sbjct 80898624 TCAAGAGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCATGTT 80898673 Score = 172 bits (190), Expect = 1e-37 Identities = 176/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| ||||| || || ||||| || || ||| ||||| |||||||||||||| | Sbjct 83841056 CCACCGCGCAGACGCAGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCCGAG 83841115 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||| |||||||||| || ||||| ||||| || |||| | || |||||| || Sbjct 83841116 AGGGTGTGGCCATCCTCCAGCTGTTTGCCGGCGAATATCAGCCTCTGCTGGTCAGGTGGG 83841175 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || ||||||||||||||||| || || || | ||||| ||||| | ||||| Sbjct 83841176 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCGACC 83841235 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || |||||||| ||||| ||||||| ||||| ||||| |||||||| || Sbjct 83841236 TCAAGAGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCATGTT 83841285 Score = 107 bits (118), Expect = 4e-18 Identities = 139/191 (73%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || ||||| ||||||||||||| | || |||| ||| || || || || || |||||| Sbjct 86261831 TCCTTTTGAATGTTGTAGTCAGACAAAGTACGGCGATCTTCCAGCTGCTTACCAGCAAAG 86261890 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 ||||| | || || ||| | | | || ||||| || | | |||| | ||||| || Sbjct 86261891 ATCAACCTCTGCTGATCAGGAGAAGT-CCTTCCTTATCCTAGGTCTTGGACTTTACATTA 86261949 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || ||||||||||| | ||| | ||||| ||||| | ||| || || | ||||| || Sbjct 86261950 TCTATAGTGTCCGAGGGTTCATCCTCGAGCGTGATGGCCTTCCCTGTAAGGGTCTTCACA 86262009 Query 283089 AATATCTGCAT 283099 || |||||||| Sbjct 86262010 AAAATCTGCAT 86262020 Score = 87.8 bits (96), Expect = 4e-12 Identities = 137/196 (70%), Gaps = 5/196 (3%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || ||||| ||||||||||| | || | |||||| || || || || || |||||| Sbjct 72218642 TCCTTTTGAGGGTTGTAGTCAGACAAAGTACAGCCATCTTCCAGCTGCTTTCCAGCAAAG 72218701 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 ||||| | || || ||| |||| || ||||| || |||||||| || ||||| | Sbjct 72218702 ATCAACCTCTGCTGATCAGGAGGAAGTCCTTCCTTATCCTGGATCTTGGCCTTTACATTT 72218761 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT-----ACCCGTCAAAGTCT 283083 || |||||||| || | || || | ||| |||| || || |||| | | | || Sbjct 72218762 TCTATAGTGTCTGAGGGCTCAACCTTGAGCATGATGGTTTTCCCCAACCCCTAAGGGACT 72218821 Query 283084 TAACGAATATCTGCAT 283099 | || || |||||||| Sbjct 72218822 TCACAAAAATCTGCAT 72218837 >seq17 Length=88915856 Score = 154 bits (170), Expect = 3e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| ||||| || || ||||| || || ||| ||||| ||| ||||||| |||| Sbjct 64219984 CCACCCCGCAGACGCAGCACCAGGTGCAAGGTGGACTCTTTCTGGGTGTTGTAATCAGAC 64220043 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||| ||||||||| || ||||| |||||||| |||| | || |||||| || Sbjct 64220044 AGGGTGCAGCCATCCTCCAGCTGTTTGCCGGCAAATATCAGCCTCTGCTGGTCAGGTGGG 64220103 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 | || ||||||||||||||||| || || || | ||||| || || | || ||| Sbjct 64220104 AGGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTATCACTGGGCTCTACT 64220163 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || |||||||| ||||| ||| ||| ||||| || || |||||||| || Sbjct 64220164 TCAAGAGTGATGGTCTTGCCCATCAGGGTCTTCACAAAGATCTGCATGTT 64220213 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 36889562 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 36889620 Score = 86.0 bits (94), Expect = 1e-11 Identities = 150/216 (69%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 282888 AGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCC 282947 || ||||||| || ||| || || ||||| |||||| || ||| ||||||| Sbjct 28740890 AGCACCAGATACAAGGTGGACTCGTTCCGGATGAAACAGTCAGACAGGGTGAAGCCATCC 28740949 Query 282948 TCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCT 283007 || || |||| | | || | || || ||| |||||| || | || || ||||| Sbjct 28740950 TCCAGCTGTTCGTCATCGAATACCAGACTTTGCTGGTCAGGAGGGAGGCCTTCACTGTCT 28741009 Query 283008 TGGATCTTTGCTTTTACGGTATCGATAGTGTC-CGAAGCTTCGACTTCGAGAGTGATCGT 283066 |||||||| || || || | | ||| ||||| | |||| ||| || |||||||| || Sbjct 28741010 TGGATCTTGGCCTTGACATTCTTGATGGTGTCACTGGGCTT-GACCTCAAGAGTGATGGT 28741068 Query 283067 CTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || || ||| ||||| ||||| |||||||| || Sbjct 28741069 CTCGCCTATCAGGGTCTTCACGAAGATCTGCATGTT 28741104 Score = 84.2 bits (92), Expect = 5e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 273780 GTGAAAATGTACCTGGCACTCGCATGGTCCTTGCCACCTTGCAGCCTCGAACCAAACTGA 273839 || || |||||||| | ||| || |||||||||||| |||||||| | |||||||||| Sbjct 66493272 GTAAAGATGTACCTAGGACTAGCTGAGTCCTTGCCACCATGCAGCCTGGTACCAAACTGA 66493331 Query 273840 CCCTCGGGCAGTAGCCAGTTTATGTTGTTGCTACCGACGTAATCCTGAGCCATATT 273895 || |||| ||| ||| | || |||||||| || ||| |||||||| ||| Sbjct 66493332 CCAATGGGCTGTAAAAGGTTCAAATTATTGCTACCCACAAAATTCTGAGCCAAATT 66493387 >seq13 Length=116904986 Score = 149 bits (164), Expect = 1e-30 Identities = 173/231 (75%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGT-CAGC 282931 ||||| ||||| | || ||||| | || ||| ||||| ||||||||||||| || | Sbjct 35782730 CCACCGCGCAGACACAGCACCAGGTACAAGGTGGACTCTTTCTGGATGTTGTAGTGCAAC 35782789 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||||||||| || | ||| | |||||| |||| | || |||||| || Sbjct 35782790 -AGGGTGCGGCCATCCTCCAGCTCTTTGCTGGCAAATATCAGCCTCTGCTGGTCAGGTGG 35782848 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || || ||||||||||||||||| || || || | ||||| ||||| | || || Sbjct 35782849 GATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCAAC 35782908 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || |||||||| ||||| ||||||| ||||| || || |||||||| || Sbjct 35782909 CTCAAGAGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATGTT 35782959 >seq4 Length=164141553 Score = 141 bits (156), Expect = 2e-28 Identities = 146/191 (76%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || ||||||||||||||||| | | || |||||||| || || || || || |||||| Sbjct 18056579 TCCTTTTGGATGTTGTAGTCCGACAAAGTACGGCCATCTTCCAGCTGCTTACCAGCAAAG 18056638 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 ||||| | || || ||| ||||| || ||||| || |||||||| || ||||| | Sbjct 18056639 ATCAACCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTT 18056698 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || ||||||||||| | ||| || ||||| ||||| || || ||||| | ||||| || Sbjct 18056699 TCTATAGTGTCCGAGGGTTCAACCTCGAGCGTGATGGTTTTTCCCGTAAGGGTCTTCACA 18056758 Query 283089 AATATCTGCAT 283099 || |||||||| Sbjct 18056759 AAAATCTGCAT 18056769 Score = 141 bits (156), Expect = 2e-28 Identities = 146/191 (76%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || ||||||||||||||||| | | || |||||||| || || || || || |||||| Sbjct 99334592 TCCTTTTGGATGTTGTAGTCCGACAAAGTACGGCCATCTTCCAGCTGCTTACCAGCAAAG 99334651 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 ||||| | || || ||| ||||| || ||||| || |||||||| || ||||| | Sbjct 99334652 ATCAACCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTT 99334711 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || ||||||||||| | ||| || ||||| ||||| || || ||||| | ||||| || Sbjct 99334712 TCTATAGTGTCCGAGGGTTCAACCTCGAGCGTGATGGTTTTTCCCGTAAGGGTCTTCACA 99334771 Query 283089 AATATCTGCAT 283099 || |||||||| Sbjct 99334772 AAAATCTGCAT 99334782 Score = 136 bits (150), Expect = 8e-27 Identities = 169/230 (73%), Gaps = 1/230 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| ||||| | || ||||| || || ||| ||||| |||||||||||||| | Sbjct 128787412 CCACCGCGCAGACTCAGCACCAGTTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCCGAC 128787353 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||| ||||||||| || ||||| || |||| |||| | | |||||| || Sbjct 128787352 AGGGTGCAGCCATCCTCCAGCTGTTTGCCT-CAAATATCAGCCTCAGCTGGTCAGGTGGG 128787294 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || ||||||||||||||||| || || || | ||||| ||||| | || || Sbjct 128787293 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCAACC 128787234 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || |||||||| ||||| ||| ||| ||||| | ||| |||| ||| || Sbjct 128787233 TCAAGAGTGATGGTCTTGCCCATCAGGGTCTTCAGGAAGATCTACATGTT 128787184 Score = 132 bits (146), Expect = 1e-25 Identities = 175/242 (72%), Gaps = 12/242 (5%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTG----CTTTCTT----TTTGGATGTTGT 282924 || |||||||| || || ||||| || || ||| || ||| | ||| |||||| Sbjct 149231616 CCCCCACGCAGACGTAGCACCAGGTGCAAGGTGGACTCTCTCTGGGTGTCTGGGTGTTGT 149231675 Query 282925 AGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGT 282984 |||| | || |||| ||||||||| || ||||| | |||||| |||| | || |||| Sbjct 149231676 AGTCCGACAGGGTGCAGCCATCCTCCAGCTGTTTGCTGGCAAATATCAGCCTCTGCTGGT 149231735 Query 282985 CACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAG 283044 || || || || ||||||||||||||||| || || || | ||||| |||| | Sbjct 149231736 CAGGTGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTCTCGATGTTGTCACTGG 149231795 Query 283045 CTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTT----AACGAATATCTGCATT 283100 ||||| || |||||||| ||||| ||||||| ||||| || ||| |||||||| Sbjct 149231796 GCTCGACCTCAAGAGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAGGAAGATCTGCATG 149231855 Query 283101 TT 283102 || Sbjct 149231856 TT 149231857 Score = 120 bits (132), Expect = 6e-22 Identities = 143/194 (74%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 ||||| ||||||||||| |||| || |||| |||||| || || || || || |||||| Sbjct 104846259 TCTTTCTGGATGTTGTAATCAGAGAGGGTGCAGCCATCTTCCAGCTGCTTGCCAGCAAAG 104846200 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 || || | ||| |||||| || || ||||| || || |||||||| ||||| ||| | Sbjct 104846199 ATGAACCTTTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGGATCTTGGCTTTCACGTTC 104846140 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 ||||| ||||| | || || || |||||||| || || |||| ||||| | Sbjct 104846139 TCGATGGTGTCACTGGGCTCCACCTCTAGAGTGATGGTTTTGTTGGTCAGGGTCTTCTTG 104846080 Query 283089 AATATCTGCATTTT 283102 || || |||||||| Sbjct 104846079 AAGATTTGCATTTT 104846066 Score = 105 bits (116), Expect = 1e-17 Identities = 137/188 (73%), Gaps = 1/188 (1%) Strand=Plus/Plus Query 282913 TTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCA 282972 |||| ||||||||||||| | || | |||||| || || || || || |||||||||| Sbjct 31007745 TTTGAATGTTGTAGTCAGACAAAGTACAGCCATCTTCCAGCTGCTTACCAGCAAAGATCA 31007804 Query 282973 AACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGA 283032 | | || || ||| ||| || || || | |||||||| || ||||| | || | Sbjct 31007805 ACCTCTGCTGATCAGGAAGAAGTCCTTCATTATTCTGGATCTTGGCCTTTACATTTTCTA 31007864 Query 283033 TAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTAC-CCGTCAAAGTCTTAACGAAT 283091 |||||||||| | ||| | ||||| ||||| || || | || | | ||||| || ||| Sbjct 31007865 TAGTGTCCGAGGGTTCAAACTCGAGTGTGATGGTTTTTCTCCATAAGGGTCTTCACAAAT 31007924 Query 283092 ATCTGCAT 283099 |||||||| Sbjct 31007925 ATCTGCAT 31007932 >seq1 Length=172151128 Score = 123 bits (136), Expect = 5e-23 Identities = 142/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || ||||| ||||||||| || | || |||||||| || || || || || |||||| Sbjct 144045302 TCCTTTTGAATGTTGTAGAAAGACAAAGTACGGCCATCTTCCAGCTGCTTACCCGCAAAG 144045361 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 ||||| | || | ||| ||||| || ||||| || |||||||| || ||||| | Sbjct 144045362 ATCAATCTCTGCTCATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTT 144045421 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || ||||||||||| | ||| || | ||| |||| || || ||||| || ||||| || Sbjct 144045422 TCTATAGTGTCCGAGGGTTCAACCTTGAGCTTGATGGTTTTTCCCGTAAAGGTCTTCACA 144045481 Query 283089 AATATCTGCAT 283099 || |||||||| Sbjct 144045482 AAAATCTGCAT 144045492 Score = 100 bits (110), Expect = 6e-16 Identities = 140/195 (72%), Gaps = 1/195 (1%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || ||||| ||||||||||||| | |||||||| || || || || || | |||||| Sbjct 19506322 TCCTTTTGAATGTTGTAGTCAGACAAAGTGCGGCCGTCTTCCAGCTGCTT-ACAGCAAAG 19506264 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 | || | || | ||| | || || ||||| || |||| ||| || ||||| || Sbjct 19506263 AGCAGCCTCTGCTAATCAGGACGGATTCCTTCCTTATCCTGGACCTTGGCCTTTACAGTT 19506204 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || |||||||||| | ||| || ||||| ||||| ||||| || | | ||||| || Sbjct 19506203 TCTGTAGTGTCCGAGGGTTCAACCTCGAGTGTGATGGTCTTCCCAATAAGGGTCTTCACA 19506144 Query 283089 AATATCTGCATTTTC 283103 || |||||||| || Sbjct 19506143 AAAGTCTGCATTGTC 19506129 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCC 168809 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||| Sbjct 115742159 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCC 115742215 >seq28 Length=148379591 Score = 107 bits (118), Expect = 4e-18 Identities = 141/194 (73%), Gaps = 1/194 (1%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 ||||| ||||||||||| |||| || |||| |||||| || || || || || ||||| Sbjct 9098657 TCTTTCTGGATGTTGTAATCAGAGAGGGTGCTGCCATCTTCCAGATGCTTGCCTGCAAA- 9098715 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 || | | | || ||| ||||| ||| || || |||||||| || || ||||| Sbjct 9098716 ATGAGCCTCTACTGATCAGGGGGAATGTACTCTTTATCCTGGATCTTGGCCTTCACGGTC 9098775 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 ||||||||||| | || || || || ||||| ||||| || |||| ||||| || Sbjct 9098776 TCGATAGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACA 9098835 Query 283089 AATATCTGCATTTT 283102 || || |||||||| Sbjct 9098836 AAGATGTGCATTTT 9098849 Score = 86.0 bits (94), Expect = 1e-11 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 282888 AGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCC 282947 || ||||| |||| || | ||| ||||||||||| |||| || |||| |||||| Sbjct 136136139 AGGACCAGGTGTAGGGTCGACTTTTTCTGGATGTTGTAATCAGAGAGGGTGCAGCCATCT 136136198 Query 282948 TCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCT 283007 || || || | || |||||||| | | || ||||| |||| ||||| || || Sbjct 136136199 TCCAGCTGCCTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGTGAATGCCCTCTTTATCC 136136258 Query 283008 TGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTC 283067 |||||||| | || || | | ||| || || | || | || || ||||| ||| Sbjct 136136259 TGGATCTTGCCCTTCACATTCTTGATGGTTTCACTGGGCTCCATCTCTAGGGTGATGGTC 136136318 Query 283068 TTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || || |||| ||||| | ||| || |||||||| Sbjct 136136319 TTGCCGGTCAGGGTCTTCATGAAGATTTGCATTTT 136136353 >seq6 Length=146485248 Score = 100 bits (110), Expect = 6e-16 Identities = 121/165 (73%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || ||||| ||||||||||||| | | | |||||| ||||| || || || |||||| Sbjct 104811104 TCCTTTTGAATGTTGTAGTCAGACAAAATACAGCCATCTTCTAGCTGCTTGCCAGCAAAG 104811045 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 ||||| | || || ||| ||||| | ||||| || |||||||| | ||||| | Sbjct 104811044 ATCAACCTCTGCTGATCAGGAGGAATTCTTTCCTTATCCTGGATCTTGACCTTTACATTT 104810985 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCC 283073 || ||||||||| | | ||| || | || ||||| ||||| ||| Sbjct 104810984 TCTATAGTGTCCAAGGGTTCAACCCCAAGTGTGATGGTCTTCCCC 104810940 >seq12 Length=92399829 Score = 98.7 bits (108), Expect = 2e-15 Identities = 57/59 (97%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| Sbjct 83796342 TTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCGA 83796400 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 81587537 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 81587595 >seq23 Length=89631738 Score = 91.5 bits (100), Expect = 3e-13 Identities = 85/108 (79%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 282995 ACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTC 283054 ||| ||||||||||||||||| || || || | ||||| ||||| | ||||| || Sbjct 85175430 ACCTTCCTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCGACCTC 85175489 Query 283055 GAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 |||||||| ||||| ||||||| ||||| ||||| |||||||| || Sbjct 85175490 AAGAGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCATGTT 85175537 >seq27 Length=41896614 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 15523625 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 15523567 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 15526783 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 15526725 >seq20 Length=69342659 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 25222665 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 25222723 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 25245265 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 25245207 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 25249988 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 25249930 >seq8 Length=167013402 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 143394607 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 143394549 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 143625853 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 143625911 >seq11 Length=111406228 Score = 87.8 bits (96), Expect = 4e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 273780 GTGAAAATGTACCTGGCACTCGCATGGTCCTTGCCACCTTGCAGCCTCGAACCAAACTGA 273839 |||||||| || | | || ||| ||||||||||| || |||| | ||||||||| Sbjct 8233010 GTGAAAATATAACGAGGGCTTGCAGCATCCTTGCCACCATGAAGCCGAGTTCCAAACTGA 8232951 Query 273840 CCCTCGGGCAGTAGCCAGTTTATGTTGTTGCTACCGACGTAATCCTGAGCCATATTCACG 273899 || |||| | ||| |||| |||||||| || || || ||| |||||||| |||||| Sbjct 8232950 CCAATGGGCTGAAGCAAGTTAATGTTGTTACTGCCCACAAAATTCTGAGCCAAATTCACA 8232891 Query 273900 ATAGTC 273905 |||||| Sbjct 8232890 ATAGTC 8232885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046704585315974