Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20spretus_20[genbank_20GCA_5F001624865.1_202016-04-26] 5,404 sequences; 2,625,587,472 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq18 244 1e-59 seq19 224 1e-53 seq1 131 2e-25 seq2 87.8 2e-12 >seq18 Length=130317789 Score = 244 bits (270), Expect = 1e-59 Identities = 508/753 (67%), Gaps = 10/753 (1%) Strand=Plus/Minus Query 145590 AAAGTCCTCCGCCCTGAAGTCATCTATGTCCTCCACCCGCCTCAGGATCCTGAGCCT-GG 145648 |||||| || | |||| ||||| || ||| || | ||||| ||||| | || Sbjct 85151625 AAAGTCTTCAACTTTGAAATCATCGATTGTCTCAACTTTTCGAAGGATTTTGAGCTTTGG 85151566 Query 145649 GAAAGGGCCGGGGGCTCCTGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGA 145708 |||||| | || ||| || ||||| | ||||| ||||| | || || ||||| | Sbjct 85151565 GAAAGGTCTTGGTTCTCGCTGT-AGCTGAATTTTCAGCGGCTCTATATGATTCAGGTAAA 85151507 Query 145709 CGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGA 145768 || || || |||| ||||| || || || |||| || || |||| || || | Sbjct 85151506 TATGTGCATCTCCCAAAGTGTGGACAAAATCACCTGGCTGCAGACCTGTGATATGTGCAA 85151447 Query 145769 CCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCC 145828 ||||||||| ||||| | |||||||| |||||||| ||||| ||||| ||||| || | Sbjct 85151446 TCATGTAGGTGAGCAGAGCATAGCTGGCAATGTTGAAAGGCACGCCCAGACCCATATCTC 85151387 Query 145829 CCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTGGCACAGGA 145888 | || | |||||| || ||||| || |||||||| | |||| |||||||| || ||| Sbjct 85151386 CTGACCTCTGGTAAAGTTGGCAAGACAGCTCCCCATTCACCACATAGAACTGACAGAGGG 85151327 Query 145889 GGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGA 145948 ||||| || ||||| ||||| ||| || || ||||||||||| | || || Sbjct 85151326 CATGGCAAGGAGGCAGTGCCATCAGGGGAAGATCTTTTGGGTTCCAGGCACACATGATGA 85151267 Query 145949 GCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGC 146008 || ||| || ||||| | ||||| | |||| | |||||||| || | Sbjct 85151266 TTCTTCTGTCATCAGGGTTGGTTTTGATGGTGTCAATCATTTTTTGCAGCTGGTCTACTC 85151207 Query 146009 CCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGA 146068 | || ||| ||||||||| | || |||| | || || || |||||||| |||| Sbjct 85151206 CTTGTCCCGGGTAATCTGAATCCATATCTTTGTACTCTGCTCCAAAATGCCTCCATTGGA 85151147 Query 146069 ACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAG----CCCGGCCCGGGCG 146124 | || || || || |||||||||| || |||| ||| || | | | Sbjct 85151146 AACCATAAACTGGGCCCAGGTCCC----CTTTCTGTCGGGCAGAAAATCCCAAGCTGTCC 85151091 Query 146125 AGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTG 146184 || ||||| ||||| || ||||| |||||||| | || ||| | | ||| | || || Sbjct 85151090 AGAAAGTCTCGGGATCCATTGGCATCCCAGATTCTCACTCCCTTGGAGGACAATTCTTTA 85151031 Query 146185 GAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACC 146244 | | ||||| ||| |||| ||||| | || ||| || | || ||| ||||||| || Sbjct 85151030 GCATTTGTGGATCCCTTGATAAACCACAACAACTCCTCCAAAACACCCTTCCAGAACACT 85150971 Query 146245 CTCTTGGTGGTCAGCAGGGGGAACTGGCCCCGCAGGGAGTACTTGGCCTGGTCCCCGAAG 146304 | ||||| || ||||| || || | | | |||| ||| ||||| ||||| Sbjct 85150970 CGTTTGGTTGTGAGCAGAGGAAATTCATCTCTCAGGCTGTATCGTGCCTGCATGCCGAAC 85150911 Query 146305 ACGGACAGGGTGCCCACGCCCGTCCTGTCCCCC 146337 || ||||||||||| ||| || | |||| || Sbjct 85150910 ACCGACAGGGTGCCTGTGCCGGTGCGGTCCTCC 85150878 >seq19 Length=126249303 Score = 224 bits (248), Expect = 1e-53 Identities = 573/863 (66%), Gaps = 17/863 (2%) Strand=Plus/Plus Query 9509 TGGGCAATATCTTAGTGGTGATTATTGTCATAAGATACATGAAGATCAAAAACCTCACTA 9568 ||||||| || | || ||| | || |||||| |||| |||| | ||| | ||| Sbjct 126020012 TGGGCAACATAATGGTTGTGTTGATCCTCATAAAGTACAGGAAGCTACAAATTATGGCTA 126020071 Query 9569 ACATGTTACTGTTAAACTTGGCAATATCTGACTTGCTATTTCTTTTAACTTTGCCATTTT 9628 | || | ||||| ||||||||||| |||||| |||| ||||| || ||| | ||||| | Sbjct 126020072 ATATCTACCTGTTCAACTTGGCAATTTCTGACCTGCTCTTTCTCTTCACTGTCCCATTCT 126020131 Query 9629 GGATGCACTATATTGGAATGTATCATGATTGGACTTTTGGTATTTCCCTGTGTAAACTGC 9688 |||| |||||| || ||| |||| ||| |||||| | | |||| ||| ||| Sbjct 126020132 GGATTCACTATGTTC---TGTGGAATGAGTGGGGTTTTGGCCACTACATGTGCAAAATGC 126020188 Query 9689 TCAGGGGTGTGTGTTACATGTCACTGTACAGCCAGGTCTTTTGCATCATCCTGCTAACAG 9748 | || | | |||| || | |||||||| || |||||| |||||| ||||| ||| Sbjct 126020189 TGTCTGGGTTTTATTACCTGGCCTTGTACAGCGAGATCTTTTTCATCATTCTGCTGACAA 126020248 Query 9749 TAGACAGGTATCTAGCTGTTGTCTATGCTGTAACTGC--TTTGAGGTTTAGAACAGTAAC 9806 | ||||| || || ||| | ||| ||||||| ||| || ||| |||| || || Sbjct 126020249 TTGACAGATACCTGGCTATCGTCCATGCTGTGTTTGCCCTTCGAGCCC--GAACTGTGAC 126020306 Query 9807 CTGTGGCATAGTTACCTGTGTATGTACCTGGTTTCTGGCAGGGTTGTTGTCCCTCCCTGA 9866 | || | | ||| || | ||||||| || ||||| || | | ||||| Sbjct 126020307 TTTTGCTACTATCACCAGTATCATTACCTGGGGCCTTGCAGGACTGGCAGCATTGCCTGA 126020366 Query 9867 ATTTTTCTTTCATGGACACCAAGATGACAATGGTAGGGTTCAGTGTGATCCTTACTACCC 9926 |||| |||| |||| ||||| | ||| | || || |||| ||| || Sbjct 126020367 ATTTATCTTCCATGAGTCTCAAGACAGCTTTGGAGAGTTTTCCTGCAGTCCTCGCTATCC 126020426 Query 9927 AGAGATGTCTACAA-ATGTTTGGAGGCGCGCCCACGTTGCAAAGGTGATTATGTTAAGTC 9985 |||| || | || | |||| || ||| | | || ||| ||| || ||| Sbjct 126020427 AGAGG-GTGAAGAAGACAGCTGGAAACGTTTCCATGCTCTAAGAATGAATATCTTTGGTC 126020485 Query 9986 TCATTTTGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGTTGA 10045 | | | ||||| |||||||||| | ||||||||| | ||| || | || || ||| Sbjct 126020486 TAGCTCTTCCTCTCCTCATTATGGTTATCTGCTACTCAGGAATCATTAAAACTCTCCTGA 126020545 Query 10046 GGCGCCCCAGCAAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCT 10105 | | |||| || || || ||||||||||| | || || |||| | ||| | | || Sbjct 126020546 GATGTCCCAATAAAAAAAAACACAAGGCCATCCGTCTTATTTTTGCTGTTATGATAGTCT 126020605 Query 10106 ATTTTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCAC-GCAACC 10164 ||| |||||||||| || |||||| | |||||||| | ||| | |||||| ||| | Sbjct 126020606 TCTTTATTTTTTGGACCCCGTACAACCTGGTTCTCCTTTTTTCTGCTTTTCACAGCA--C 126020663 Query 10165 CTTCTTA---ACCTGCAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGATAACA 10221 || ||| ||| || || ||| ||| | | ||||| |||| ||| | | || Sbjct 126020664 GTTTTTAGAGACCAGCTGTCAGCA--GAGTAAACATCTGGACCTGGCCATGCAGGTGACT 126020721 Query 10222 AAAACAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAG 10281 | | |||||||| ||||| || || || ||||| |||||||| || || || ||| Sbjct 126020722 GAGGTGATTGCCTACACCCACTGCTGTATTAATCCAGTAATCTACGCCTTTGTTGGTGAG 126020781 Query 10282 AAGTTTAGAAGACACCTGTACCACTTCTTCCACACCTACGTGGCCATCTACCTCTGCAAG 10341 | ||| | | |||||| | ||| ||||||| | ||||| | ||||| | || Sbjct 126020782 AGGTTCCGGAAACACCTTCGGCTCTTTTTCCACAGAAATGTGGCAGTTTACCTGGGAAAA 126020841 Query 10342 TACATCCCCTTCCTGTCTGGTGA 10364 || || || || || ||||||| Sbjct 126020842 TATATTCCGTTTCTTCCTGGTGA 126020864 Score = 224 bits (248), Expect = 1e-53 Identities = 573/863 (66%), Gaps = 17/863 (2%) Strand=Plus/Plus Query 176395 TGGGCAATATCTTAGTGGTGATTATTGTCATAAGATACATGAAGATCAAAAACCTCACTA 176454 ||||||| || | || ||| | || |||||| |||| |||| | ||| | ||| Sbjct 126020012 TGGGCAACATAATGGTTGTGTTGATCCTCATAAAGTACAGGAAGCTACAAATTATGGCTA 126020071 Query 176455 ACATGTTACTGTTAAACTTGGCAATATCTGACTTGCTATTTCTTTTAACTTTGCCATTTT 176514 | || | ||||| ||||||||||| |||||| |||| ||||| || ||| | ||||| | Sbjct 126020072 ATATCTACCTGTTCAACTTGGCAATTTCTGACCTGCTCTTTCTCTTCACTGTCCCATTCT 126020131 Query 176515 GGATGCACTATATTGGAATGTATCATGATTGGACTTTTGGTATTTCCCTGTGTAAACTGC 176574 |||| |||||| || ||| |||| ||| |||||| | | |||| ||| ||| Sbjct 126020132 GGATTCACTATGTTC---TGTGGAATGAGTGGGGTTTTGGCCACTACATGTGCAAAATGC 126020188 Query 176575 TCAGGGGTGTGTGTTACATGTCACTGTACAGCCAGGTCTTTTGCATCATCCTGCTAACAG 176634 | || | | |||| || | |||||||| || |||||| |||||| ||||| ||| Sbjct 126020189 TGTCTGGGTTTTATTACCTGGCCTTGTACAGCGAGATCTTTTTCATCATTCTGCTGACAA 126020248 Query 176635 TAGACAGGTATCTAGCTGTTGTCTATGCTGTAACTGC--TTTGAGGTTTAGAACAGTAAC 176692 | ||||| || || ||| | ||| ||||||| ||| || ||| |||| || || Sbjct 126020249 TTGACAGATACCTGGCTATCGTCCATGCTGTGTTTGCCCTTCGAGCCC--GAACTGTGAC 126020306 Query 176693 CTGTGGCATAGTTACCTGTGTATGTACCTGGTTTCTGGCAGGGTTGTTGTCCCTCCCTGA 176752 | || | | ||| || | ||||||| || ||||| || | | ||||| Sbjct 126020307 TTTTGCTACTATCACCAGTATCATTACCTGGGGCCTTGCAGGACTGGCAGCATTGCCTGA 126020366 Query 176753 ATTTTTCTTTCATGGACACCAAGATGACAATGGTAGGGTTCAGTGTGATCCTTACTACCC 176812 |||| |||| |||| ||||| | ||| | || || |||| ||| || Sbjct 126020367 ATTTATCTTCCATGAGTCTCAAGACAGCTTTGGAGAGTTTTCCTGCAGTCCTCGCTATCC 126020426 Query 176813 AGAGATGTCTACAA-ATGTTTGGAGGCGCGCCCACGTTGCAAAGGTGATTATGTTAAGTC 176871 |||| || | || | |||| || ||| | | || ||| ||| || ||| Sbjct 126020427 AGAGG-GTGAAGAAGACAGCTGGAAACGTTTCCATGCTCTAAGAATGAATATCTTTGGTC 126020485 Query 176872 TCATTTTGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGTTGA 176931 | | | ||||| |||||||||| | ||||||||| | ||| || | || || ||| Sbjct 126020486 TAGCTCTTCCTCTCCTCATTATGGTTATCTGCTACTCAGGAATCATTAAAACTCTCCTGA 126020545 Query 176932 GGCGCCCCAGCAAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCT 176991 | | |||| || || || ||||||||||| | || || |||| | ||| | | || Sbjct 126020546 GATGTCCCAATAAAAAAAAACACAAGGCCATCCGTCTTATTTTTGCTGTTATGATAGTCT 126020605 Query 176992 ATTTTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCAC-GCAACC 177050 ||| |||||||||| || |||||| | |||||||| | ||| | |||||| ||| | Sbjct 126020606 TCTTTATTTTTTGGACCCCGTACAACCTGGTTCTCCTTTTTTCTGCTTTTCACAGCA--C 126020663 Query 177051 CTTCTTA---ACCTGCAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGATAACA 177107 || ||| ||| || || ||| ||| | | ||||| |||| ||| | | || Sbjct 126020664 GTTTTTAGAGACCAGCTGTCAGCA--GAGTAAACATCTGGACCTGGCCATGCAGGTGACT 126020721 Query 177108 AAAACAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAG 177167 | | |||||||| ||||| || || || ||||| |||||||| || || || ||| Sbjct 126020722 GAGGTGATTGCCTACACCCACTGCTGTATTAATCCAGTAATCTACGCCTTTGTTGGTGAG 126020781 Query 177168 AAGTTTAGAAGACACCTGTACCACTTCTTCCACACCTACGTGGCCATCTACCTCTGCAAG 177227 | ||| | | |||||| | ||| ||||||| | ||||| | ||||| | || Sbjct 126020782 AGGTTCCGGAAACACCTTCGGCTCTTTTTCCACAGAAATGTGGCAGTTTACCTGGGAAAA 126020841 Query 177228 TACATCCCCTTCCTGTCTGGTGA 177250 || || || || || ||||||| Sbjct 126020842 TATATTCCGTTTCTTCCTGGTGA 126020864 Score = 95.1 bits (104), Expect = 1e-14 Identities = 229/345 (66%), Gaps = 5/345 (1%) Strand=Plus/Minus Query 176358 CCCGCCCTGTATCTGCTTGTGTTTCTCTTTGGGTTGTTGGGCAATATCTTAGTGGTGATT 176417 ||| |||||||| || ||||| || |||| ||||||||||| || ||||| | | Sbjct 125960327 CCCCCCCTGTATTCTCTAGTGTTCATCATTGGAGTGTTGGGCAATGTCCTAGTGATTCTG 125960268 Query 176418 ATTGTCATAAGATACATGAAGATCAAAAACCTCACTAACATGTTACTGTTAAACTTGGCA 176477 | |||| | | || | | ||| | | || | ||| | ||||| ||| |||| Sbjct 125960267 GTGCTCATGCAGCATAGGAGGCTTCAAAGCATGACCAGCATCTACCTGTTCAACCTGGCT 125960208 Query 176478 ATATCTGACTTGCTATTTCTTTTAACTTTGCCATTTTGGATGCACTA-TATTGGAATGTA 176536 | ||||| || | || ||||| ||||| || || ||||| |||| | | ||| | Sbjct 125960207 GTCTCTGATCTGGTCTTCCTTTTCACTTTACCTTTCTGGATTGACTACAAGTTGAAAG-- 125960150 Query 176537 TCATGATTGGACTTTTGGTATTTCCCTGTGTAAACTGCTCAGGGGTGTGTGTTACATGTC 176596 | || |||| ||||||| || | |||| || || ||| || | | |||| || Sbjct 125960149 --ACGACTGGATTTTTGGTGATTTCATGTGCAAGCTTCTCTCTGGGTTTTATTACCTGGG 125960092 Query 176597 ACTGTACAGCCAGGTCTTTTGCATCATCCTGCTAACAGTAGACAGGTATCTAGCTGTTGT 176656 | ||||| || |||| | ||||||||| | || | ||||| || || || |||| Sbjct 125960091 CTTATACAGTGAGATCTTCTTTATCATCCTGTTGACGATTGACAGATACCTGGCCATTGT 125960032 Query 176657 CTATGCTGTAACTGCTTTGAGGTTTAGAACAGTAACCTGTGGCAT 176701 | ||||||| ||| ||||| |||| || || | |||||| Sbjct 125960031 CCATGCTGTGTTTGCCCTGAGGGCCCGAACTGTTACTTTTGGCAT 125959987 Score = 95.1 bits (104), Expect = 1e-14 Identities = 229/345 (66%), Gaps = 5/345 (1%) Strand=Plus/Minus Query 9472 CCCGCCCTGTATCTGCTTGTGTTTCTCTTTGGGTTGTTGGGCAATATCTTAGTGGTGATT 9531 ||| |||||||| || ||||| || |||| ||||||||||| || ||||| | | Sbjct 125960327 CCCCCCCTGTATTCTCTAGTGTTCATCATTGGAGTGTTGGGCAATGTCCTAGTGATTCTG 125960268 Query 9532 ATTGTCATAAGATACATGAAGATCAAAAACCTCACTAACATGTTACTGTTAAACTTGGCA 9591 | |||| | | || | | ||| | | || | ||| | ||||| ||| |||| Sbjct 125960267 GTGCTCATGCAGCATAGGAGGCTTCAAAGCATGACCAGCATCTACCTGTTCAACCTGGCT 125960208 Query 9592 ATATCTGACTTGCTATTTCTTTTAACTTTGCCATTTTGGATGCACTA-TATTGGAATGTA 9650 | ||||| || | || ||||| ||||| || || ||||| |||| | | ||| | Sbjct 125960207 GTCTCTGATCTGGTCTTCCTTTTCACTTTACCTTTCTGGATTGACTACAAGTTGAAAG-- 125960150 Query 9651 TCATGATTGGACTTTTGGTATTTCCCTGTGTAAACTGCTCAGGGGTGTGTGTTACATGTC 9710 | || |||| ||||||| || | |||| || || ||| || | | |||| || Sbjct 125960149 --ACGACTGGATTTTTGGTGATTTCATGTGCAAGCTTCTCTCTGGGTTTTATTACCTGGG 125960092 Query 9711 ACTGTACAGCCAGGTCTTTTGCATCATCCTGCTAACAGTAGACAGGTATCTAGCTGTTGT 9770 | ||||| || |||| | ||||||||| | || | ||||| || || || |||| Sbjct 125960091 CTTATACAGTGAGATCTTCTTTATCATCCTGTTGACGATTGACAGATACCTGGCCATTGT 125960032 Query 9771 CTATGCTGTAACTGCTTTGAGGTTTAGAACAGTAACCTGTGGCAT 9815 | ||||||| ||| ||||| |||| || || | |||||| Sbjct 125960031 CCATGCTGTGTTTGCCCTGAGGGCCCGAACTGTTACTTTTGGCAT 125959987 Score = 95.1 bits (104), Expect = 1e-14 Identities = 167/239 (70%), Gaps = 6/239 (3%) Strand=Plus/Plus Query 10057 AAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATTTTGTTTTT 10116 ||||||| | ||| ||| | ||||||||||||| ||||||| | | ||| ||| | || Sbjct 126113014 AAGAAGAGGCACAGGGCTGTGAGGCTCATCTTTGCCATCATGATTGTCTACTTTCTCTTC 126113073 Query 10117 TGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCTTCTTAACCTG 10176 ||||| || ||||| ||||||||| | || | ||||| || | || |||| || | Sbjct 126113074 TGGACTCCATACAATATTGTTCTCTTCTTGACCACCTTCCA-GGAATCCTTGGGAATGAG 126113132 Query 10177 ---CAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGATAACAAAAACAGTAGCC 10233 | ||||| ||||| || |||| ||| ||| ||| | | ||| | || | | Sbjct 126113133 TAACTGTGTG-ATTGA-CAAGCACTTAGACCAGGCCATGCAGGTGACAGAGACTCTTGGA 126113190 Query 10234 TACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAAGTTTAGAAG 10292 |||||||| ||||| || || || || || || || || || |||||||| |||| Sbjct 126113191 ATGACACACTGCTGCATTAATCCTGTCATTTATGCCTTTGTTGGAGAGAAGTTCCGAAG 126113249 Score = 95.1 bits (104), Expect = 1e-14 Identities = 167/239 (70%), Gaps = 6/239 (3%) Strand=Plus/Plus Query 176943 AAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATTTTGTTTTT 177002 ||||||| | ||| ||| | ||||||||||||| ||||||| | | ||| ||| | || Sbjct 126113014 AAGAAGAGGCACAGGGCTGTGAGGCTCATCTTTGCCATCATGATTGTCTACTTTCTCTTC 126113073 Query 177003 TGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCTTCTTAACCTG 177062 ||||| || ||||| ||||||||| | || | ||||| || | || |||| || | Sbjct 126113074 TGGACTCCATACAATATTGTTCTCTTCTTGACCACCTTCCA-GGAATCCTTGGGAATGAG 126113132 Query 177063 ---CAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGATAACAAAAACAGTAGCC 177119 | ||||| ||||| || |||| ||| ||| ||| | | ||| | || | | Sbjct 126113133 TAACTGTGTG-ATTGA-CAAGCACTTAGACCAGGCCATGCAGGTGACAGAGACTCTTGGA 126113190 Query 177120 TACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAAGTTTAGAAG 177178 |||||||| ||||| || || || || || || || || || |||||||| |||| Sbjct 126113191 ATGACACACTGCTGCATTAATCCTGTCATTTATGCCTTTGTTGGAGAGAAGTTCCGAAG 126113249 Score = 93.3 bits (102), Expect = 5e-14 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 10057 AAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATTTTGTTTTT 10116 ||||||| | ||| ||| | ||||||||||||| ||||||| | | ||| ||| | || Sbjct 126130592 AAGAAGAGGCACAGGGCTGTGAGGCTCATCTTTGCCATCATGATCGTCTACTTTCTCTTC 126130651 Query 10117 TGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCA 10157 ||||| |||||||||||||| ||||| ||| | ||||| || Sbjct 126130652 TGGACTCCCTACAACATTGTCCTCCTCCTGACCACCTTCCA 126130692 Score = 93.3 bits (102), Expect = 5e-14 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 176943 AAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATTTTGTTTTT 177002 ||||||| | ||| ||| | ||||||||||||| ||||||| | | ||| ||| | || Sbjct 126130592 AAGAAGAGGCACAGGGCTGTGAGGCTCATCTTTGCCATCATGATCGTCTACTTTCTCTTC 126130651 Query 177003 TGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCA 177043 ||||| |||||||||||||| ||||| ||| | ||||| || Sbjct 126130652 TGGACTCCCTACAACATTGTCCTCCTCCTGACCACCTTCCA 126130692 >seq1 Length=198846266 Score = 131 bits (144), Expect = 2e-25 Identities = 125/159 (79%), Gaps = 7/159 (4%) Strand=Plus/Minus Query 138082 CAGCGCCTCAGCCTCACCCTGAGGGTTTTGAGCTTTTCCCCCAGGGAGTTCACTTTATCC 138141 ||||||| ||||| || ||||||||| || ||||| || |||||||| |||| | ||| Sbjct 131965248 CAGCGCCGCAGCCGCATCCTGAGGGTCTTCAGCTTCTCACCCAGGGAATTCAAATGCTCC 131965189 Query 138142 TT--TTCCTGGTCGGTGCTGTGGTTCTCGGCCTGGGGCATCACCTCCTCCAGGTAAAACT 138199 || || |||| | |||| |||| |||||||||||||| || |||||||||||| Sbjct 131965188 TTGATTTCTGGGCCATGCT-----TCTCTGCCTGGGGCATCACTTCTACCAGGTAAAACT 131965134 Query 138200 GGATCATCTCAGACAGGGCCTGGCAGCCCAGGTAACCCT 138238 ||||||| || || | ||| ||||| |||| |||||||| Sbjct 131965133 GGATCATTTCTGATAAGGCTTGGCAACCCAAGTAACCCT 131965095 Score = 91.5 bits (100), Expect = 2e-13 Identities = 76/93 (82%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 137924 AGTTTTTCATCTTTGTGGTCATGTAGGCCTCTATGTAGTTAATGAAGATGTCAAACTCGC 137983 || ||||||| || | ||||||| || |||||| |||| |||||||||||||| || Sbjct 131968054 AGCTTTTCATTTTGATCATCATGTATGCTTCTATGCAGTTGATGAAGATGTCAAATTCAT 131967995 Query 137984 TCATGGCCTTGTAGACCCCTTTTTCCTGGAGCT 138016 |||||||||||||||| |||| || ||||||| Sbjct 131967994 TCATGGCCTTGTAGACACCTTGGTCTTGGAGCT 131967962 >seq2 Length=131945496 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 146125 AGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTG 146184 || ||||| ||||| || ||||| |||||||| | || ||| | | ||| | || || Sbjct 87052993 AGAAAGTCTCGGGATCCATTGGCATCCCAGATTCTCACTCCCTTGGAGGACAATTCTTTA 87052934 Query 146185 GAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACC 146244 | | ||||| ||| |||| ||||| | || ||| || | || ||| ||||||| || Sbjct 87052933 GCATTTGTGGATCCCTTGATAAACCACAACAACTCCTCCAAAACACCCTTCCAGAACACT 87052874 Query 146245 CTCTTGGTGGTCAGCAGGGGGAACTGGCCCCGCAGGGAGTACTTGGCCTGGTCCCCGAAG 146304 | ||||| || ||||| || || | | | |||| ||| ||||| ||||| Sbjct 87052873 CGTTTGGTTGTGAGCAGAGGAAATTCATCTCTCAGGCTGTATCGTGCCTGCATGCCGAAC 87052814 Query 146305 ACGGACAGGGTGCCCACGCCCGTCCTGTCCCCC 146337 || ||||||||||| ||| || | |||| || Sbjct 87052813 ACCGACAGGGTGCCTGTGCCGGTGCGGTCCTCC 87052781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590036940312160