Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20spretus_20[genbank_20GCA_5F001624865.1_202016-04-26] 5,404 sequences; 2,625,587,472 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq17 221 1e-52 seq3385 203 3e-47 seq14 150 2e-31 seq3 141 1e-28 seq15 131 2e-25 seq10 129 6e-25 seq20 104 2e-17 seq4 93.3 4e-14 seq16 89.7 5e-13 seq12 89.7 5e-13 seq7 87.8 2e-12 seq18 84.2 2e-11 >seq17 Length=136257712 Score = 221 bits (244), Expect = 1e-52 Identities = 445/649 (69%), Gaps = 31/649 (5%) Strand=Plus/Minus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 ||||| || ||| | || || ||| |||| || || | || ||||| |||||| || Sbjct 93988306 GAGCCACTACTGAGAGAAAATCCCTGCCGCTTTGTTGTCTTTCCCATTGAATACCATGAT 93988247 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| || || ||||| || || ||||| | | || |||||||||| Sbjct 93988246 ATCTGGCAGATGTACAAGAAAGCTGAGGCCTCCTTTTGGACTGCCAAGAAGGTGGACCTT 93988187 Query 116696 TCCAAGGACACGAGCGACTGGGAGCGCT-TGAACGACAACGAGCGCCATTTCATCAAGCA 116754 ||||||| | ||||||| ||| |||| | ||| | ||||| || || Sbjct 93988186 TCCAAGGGTATTCAACACTGGGAA-GCTCTGAAACTGGATGAGAGACATTTTATAGCTCA 93988128 Query 116755 CGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG-TT 116813 | | ||||| || || || || || || ||||| ||||| || || |||| ||||| || Sbjct 93988127 CATTCTGGCTTTCTTTGCAGCGAGTGATGGCATAGTCAATGAAAACTTGGTGGAGCGATT 93988068 Query 116814 TCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGG 116873 | || || || || || || | ||||| || || ||||| ||||| || | ||||||| Sbjct 93988067 TAGC-CAAGAAGTTCAAGTTACAGAGGCCCGCTGTTTCTATGGCTTCCAAACTGCCATGG 93988009 Query 116874 AGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT----GCGCTCTTCG 116929 | ||| | ||||| |||||||| |||| || ||||||||| | | | | | Sbjct 93988008 AAAACATACACTCTGAAATGTACAGTCCCCTTATTGACACGTACATTAAAGATCCCAAGG 93987949 Query 116930 GAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAA--AGA-GAAG 116986 | ||||| || | || || || || | || ||||| || || || ||| |||| Sbjct 93987948 AAAGAGAATATC----TCTTCAATGCTATTTAAACAATGCCTTGTGTGAAGAAGAAGAAG 93987893 Query 116987 GCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTG 117046 || || ||||| |||| |||| | | || |||| || | | || || | | ||| Sbjct 93987892 GCTGACTGGGCCTTGCGTTGGACTGGGGACAAAGAGTCCTCATATGGAGAATGAGTTGTG 93987833 Query 117047 GCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTC 117106 ||||| || || || || || ||||||||| ||| ||| ||||| |||||| Sbjct 93987832 GCCTTTGCTGCGGTGGAAGGAGTCTTCTTT----GCA---TCG-----ATATTCTGGCTC 93987785 Query 117107 AAGAAACGCGGCCTCATGCCCGGCCT--GACTTTCAGCAACGAGCTCATCTCCAGGGACG 117164 ||||| ||| | || ||| ||||| |||||| ||| ||| | || ||| |||| Sbjct 93987784 AAGAATCGCAGACTGATGTTGGGCCTTACACTTTC--CAATGAGTTTATTAGCAGAGACG 93987727 Query 117165 AGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCA 117213 ||||| | || || |||| |||||| || |||||||||| |||| || Sbjct 93987726 AGGGTTTACACTGGGACTCTGCCTGGCTGATGTTCAAGCACCTGGTACA 93987678 >seq3385 Length=62036 Score = 203 bits (224), Expect = 3e-47 Identities = 421/624 (67%), Gaps = 2/624 (0%) Strand=Plus/Plus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 |||||||| || | ||| |||| |||| || || || || || || || || || Sbjct 20055 GAGCCGCTCCTAAGAAAGAGTTCCCGAAGGTTTGTCATCTTTCCAATCCAGTATCCTGAT 20114 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || ||| | ||||| || | || ||| || |||||||| | || ||||| ||| || Sbjct 20115 ATCTGGAGAATGTATAAGCAAGCACGGGCATCTTTCTGGACAGAAGAAGAGGTTGACTTG 20174 Query 116696 TCCAAGGACACGAGCGACTGGGAGC-GCTTGAACGACAACGAGCGCCATTTCATCAAGCA 116754 || |||||| ||||| | |||| || | ||||| | || ||| || Sbjct 20175 TCAAAGGACCTCCCTCACTGGAACAAGCTTAAATC-CGACGAGAAGTACTTTATCTCCCA 20233 Query 116755 CGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTT 116814 | | | |||||||| || ||||| || || || || || || || |||| |||||||| Sbjct 20234 CATCTTAGCCTTTTTTGCAGCCAGTGATGGAATTGTAAATGAAAACTTGGTGGAGCGTTT 20293 Query 116815 CGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGA 116874 ||||||||||||||| | ||| | | |||||||| ||||||||||| ||| || Sbjct 20294 TAGTCAGGAGGTGCAGGTTCCGGAGACTCACTGCTTCTATGGCTTTCAGATTCTCATCGA 20353 Query 116875 GAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGA 116934 ||| || ||||| || ||||| || || ||||| ||| | | | | || | Sbjct 20354 GAATGTTCACTCAGAGATGTACAGTTTACTAATAGACACTTACATCAGAGATCCAAAGAA 20413 Query 116935 GAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTG 116994 | | ||| || ||||| || || || ||||| | || || | || || || || Sbjct 20414 AAGGGAATTTTTATTTAACGCAATTGAAACAATGCCATATGTTAAGAAAAAAGCGGACTG 20473 Query 116995 GGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGC 117054 ||| ||||||||||| || | || | | | || || || | |||||||||| || Sbjct 20474 GGCTCTGCGCTGGATAGCAGATAGGAAATCTACTTTTGGGGAAAGAGTGGTGGCCTTTGC 20533 Query 117055 GGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACG 117114 || || || || | | ||| || || || || || ||||| ||||| ||||| | Sbjct 20534 TGCTGTGGAAGGAATTTCCTTCTCTGGATCATTTGCTGCAATATTCTGGCTAAAGAAGAG 20593 Query 117115 CGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCA 117174 ||||||||||| | |||||||| || || || ||| |||||| || ||||| || Sbjct 20594 AGGCCTCATGCCTGAACTGACTTTTTCAAATGAACTGATCAGCAGGGATGAAGGTCTTCA 20653 Query 117175 TTGCGACTTTGCCTGTTTGCTGTT 117198 || ||||||||||| || |||| Sbjct 20654 CTGTGACTTTGCCTGCCTGATGTT 20677 >seq14 Length=152946536 Score = 150 bits (166), Expect = 2e-31 Identities = 503/768 (65%), Gaps = 31/768 (4%) Strand=Plus/Minus Query 116615 TTCCCCATACAATACCCGGACATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGG 116674 || ||||| | |||| || || |||| |||||||| || || ||||| | || ||| Sbjct 69610591 TTTCCCATCTAGTACCATGATATCTGGCAGATGTACAAGAAAGCTGAGGCCACCTTTTGG 69610532 Query 116675 ACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGACTGGGAGCGCT-TGAACGACAA 116733 || | |||||||||||||| |||||||| | ||| ||||||| ||| |||| |||| Sbjct 69610531 ACTGATGAGGAGGTGGACCTTTCCAAGGAGATCAGC-ACTGGGAA-GCTCTGAATGACA- 69610475 Query 116734 CGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAA 116793 | |||| || || || ||||| || || || || || || ||||| |||| Sbjct 69610474 -----GAAATTTTATAGCTCATGTTCTGGCTTTCTTTGCAGCGAGTGATGGCATACTCAA 69610420 Query 116794 CGAGAATCTGGTCGAGCG-TTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCT 116852 || || |||| ||||| ||| || || || || || || | ||||| | || || | Sbjct 69610419 CGCAAACTTGGTGGAGCGATTTAGC-CAAGAAGTTCAAGTTACAGAGGCTGGATGTTT-T 69610362 Query 116853 ACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACA 116912 | ||||| | | | || ||| | | ||||| ||||||| ||| || |||| Sbjct 69610361 ATGGCTTCTAAACTGGCAGGGAAAGGATACACTCTAAAATGTACAGTCTCCTTATTGACA 69610302 Query 116913 CGTACGT----GCGCTCTTCGGAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATG 116968 ||| | | | | | | ||||| || | || || || || || || ||| Sbjct 69610301 TTTACATTAAAGATCCCAAAGAAAGAGAATATC----TTTTCAATGCTATTGAAACAATG 69610246 Query 116969 CCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCC 117028 || || |||||||| || ||||| ||| |||| | | || ||| | | Sbjct 69610245 CCT---GT----GAGAAGGCTGACTGGGCCTTGCATTGGACTGGGGACAAAGAAGTTACA 69610193 Query 117029 TTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTT-CGGGCAGTTT 117087 | | || || | |||||||| || | || || | ||||||||| | || ||| Sbjct 69610192 TATGCAGAACGAGTTGTGGCCTTTGCCACGGTAGAAGCAATCTTCTTTTTCTGGTTCTTT 69610133 Query 117088 CGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGA 117147 || | ||||| ||||||||||||| || || ||||| |||| || || ||| || Sbjct 69610132 TGCATCGATATTCTGGCTCAAGAAACAGGGGCTGATGCCGGGCCCTACATTTTCCAATGA 69610073 Query 117148 GCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTT 117207 ||| || ||| ||| ||||| | || || ||||||| || || |||||||||| | Sbjct 69610072 GCTTATTAGCAGAGACTAGGGTTTACACTGGGACTTTGTCTACCTGATGTTCAAGCACCT 69610013 Query 117208 GGTGCAGCGACCGAGCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGG-TCGCCATCG 117266 ||| || | | | | || || | || | || || ||||| ||| || | | || | Sbjct 69610012 GGTACA-CAAGCCATCGAAGC-AGAGTAAAAGAAATAATCACCAACGAGGTTAGGGATAG 69609955 Query 117267 AGCAGCGCTTCCTCACCGAAGCGCTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAACGA 117326 ||||| | |||||| || || |||| ||| || | | | || ||| || Sbjct 69609954 AGCAGGGGATCCTCATGGAGGCCTTGCCTGTGATGCTCATCGAGATGAACTGCACTTTGA 69609895 Query 117327 TGTCGCAATACATCGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGG 117374 || ||| ||||| || || || ||||| ||||| |||| ||||||| Sbjct 69609894 TGAAGCAGTACATTGAATTTGTGGCCGATAGGCTTATGCTGGAGCTGG 69609847 >seq3 Length=125065471 Score = 141 bits (156), Expect = 1e-28 Identities = 172/232 (74%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 |||||||| || ||||| || || || || ||||| ||||||||| | || || || || Sbjct 62144444 AAAATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCC 62144503 Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | |||| | | | |||| | |||| || || | || ||||||||||||||| | || Sbjct 62144504 AGTGACACCATCGAGAACG-TGAAGGCCAAGATCCAGGATAAAGAGGGCATCCCCCCTGA 62144562 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| | || |||| |||||||| ||||| || || | ||||||||| || || Sbjct 62144563 CCAGCAGAGGCTGATCTTTGCGGGCAAGCAGCTAGAAGATGGCCGCACCCTCTCTGATTA 62144622 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||||||| ||| | || ||||| || || | || ||||||| ||| Sbjct 62144623 CAACATCCAGAAAGAGTCGACCCTGCACCTGGTCCTCCGTCTGAGGGGTGGC 62144674 Score = 123 bits (136), Expect = 3e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || ||||| ||||||||| | || || || ||| Sbjct 62144675 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 62144734 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | | |||| || || | || ||||||||||||||| | |||||| Sbjct 62144735 GACACCATCGAGAATGTGAAGGCCAAGATCCAGGATAAAGAGGGCATCCCCCCTGACCAG 62144794 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | || |||| || ||||| ||||| || || | ||||| ||| || |||||| Sbjct 62144795 CAGAGGCTGATCTTTGCCGGCAAGCAGCTAGAAGATGGCCGCACTCTCTCTGATTACAAC 62144854 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||| ||| | || ||||| || || | || ||||||| ||| Sbjct 62144855 ATCCAGAAAGAGTCGACCCTGCACCTGGTCCTCCGTCTGAGGGGTGGC 62144902 Score = 109 bits (120), Expect = 6e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || ||||| || || || | |||||| |||||||| | || || || || Sbjct 98064821 AACATGCAGATCTTCGTGAAGACCCTGATGGGCAAGACCATCACTCTTGAGGTAGAGCCC 98064762 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | |||| | | | | | |||| || || | ||||| |||||| |||| | ||| Sbjct 98064761 AGTGACACCATCGAGAATGTAAAGGCCAAGATCCAAGACAAGGAGGGCCTCCCACCTGAC 98064702 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| | || || | ||| ||||||||||| || || | | |||||| || ||| Sbjct 98064701 CAGCAGAGGCTGATATTCGCCGGCAAACAGCTAGAGGATGGCCACACCCTGTCTGATTAC 98064642 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||||||||| ||| |||| |||| || ||| |||| Sbjct 98064641 AACATCCAGAAAGAGTCCACCTTGCACCTGGTGCTGCG 98064604 >seq15 Length=152823684 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || ||||| | || || || ||||||||| | || ||||| ||| Sbjct 125085171 ATGCAGATCTTTGTGAAAACCTTAACTGGTAAGACCATCACCCTGGAGGTCGAGCCCAGT 125085112 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||||| ||| || | ||||| |||||||||||| | |||||| Sbjct 125085111 GACACCATTGAGAATGTCAAGGCAAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 125085052 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | || |||| || ||||| |||||||| || | |||||||| || |||||| Sbjct 125085051 CAGAGGCTGATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCAGATTACAAC 125084992 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||| ||| |||| ||||| || || | ||| | || || || Sbjct 125084991 ATCCAGAAAGAGTCCACCCTGCACCTGGTCCTTCGCCTCAGAGGTGG 125084945 >seq10 Length=90668104 Score = 129 bits (142), Expect = 6e-25 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 40705 AAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACG 40764 || || || |||||||| |||||||| | || ||||| ||| |||| | | | | Sbjct 33660661 AAGACCCTGACGGGCAAGACCATCACTCTTGAGGTCGAGCCCAGTGACACCATCGAGAAT 33660602 Query 40765 CTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTAC 40824 |||||| || || | ||||| || |||||||| | |||||||| | || || | | Sbjct 33660601 GTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCTGACCAGCAGAGGCTGATATTC 33660542 Query 40825 GCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCC 40884 |||||||||||||||| || | |||||||| |||||||||||||||||| ||| || Sbjct 33660541 TCGGGCAAACAGCTGGAGGATGGCCGCACCCTGTCCGACTACAACATCCAGAAAGAGTCC 33660482 Query 40885 ACGCTGCATCTAGTGTTGCGCTTG 40908 || |||| || ||| ||||| || Sbjct 33660481 ACCTTGCACCTGGTGCTGCGCCTG 33660458 >seq20 Length=148322235 Score = 104 bits (114), Expect = 2e-17 Identities = 151/212 (71%), Gaps = 1/212 (0%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 ||||||||||| |||| || || || || ||||| ||||||||| | || | || || Sbjct 135500556 AAAATGCAAATCTTCGAGAAGACCCTGACTGGCAAGACCATCACCCTAGAGATGGAGCCC 135500497 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | || | | | | | | |||| || || | || |||||||||||| || || || Sbjct 135500496 AGTGAAACCATCGAGAATGTGAAGGCCAAGATCCAGGATAAAGAGGGCATCACCCCG-AC 135500438 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| | ||||||| || ||||| || ||||| || | |||||| || || ||| Sbjct 135500437 CAGCAGAGGCTCATCTTTGCAGGCAAGCAACTGGAAGATGGCCGCACCTTCTCTGATTAC 135500378 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||| ||| || ||||| || || Sbjct 135500377 AACATCCAGAAAGAGTTGACCCTGCACCTGGT 135500346 >seq4 Length=114123490 Score = 93.3 bits (102), Expect = 4e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 117032 GGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCC 117091 || || ||| | |||||||| || ||||| || || |||||||||| || ||| || Sbjct 16582814 GGAGAACGCGTTGTGGCCTTTGCCGCCGTAGAAGGAATCTTCTTTTCCGGTTCTTTTGCA 16582873 Query 117092 GCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTC 117151 | ||||| |||||||||||||| || || ||||| ||||| || || ||| ||||| Sbjct 16582874 TCAATATTCTGGCTCAAGAAACGGGGGCTGATGCCGGGCCTTACATTTTCCAATGAGCTT 16582933 Query 117152 ATCTCCAGGGACGAGG 117167 || ||| ||||||| Sbjct 16582934 ATTAGCAGAGACGAGG 16582949 Score = 91.5 bits (100), Expect = 2e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 |||||| ||||| | || ||||||||||| ||||| | || ||||| | |||| || Sbjct 16580105 GAGCCGTTGCTGAGAGAAAACCCCCGCCGCTTCGTTGTCTTTCCCATCGAGTACCATGAT 16580164 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGT 116688 || |||| |||||||| || |||||||| || || ||||| | ||||||||| Sbjct 16580165 ATCTGGCAGATGTACAAGAAAGCCGAGGCCTCCTTTTGGACTGCCGAGGAGGT 16580217 >seq16 Length=150978388 Score = 89.7 bits (98), Expect = 5e-13 Identities = 134/188 (71%), Gaps = 2/188 (1%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 |||||||| || || | || || || || ||||| ||||||||| | || || || || Sbjct 58879554 AAAATGCAGATCTTTCTGAAGACCCTGACCGGCAAGACCATCACCCTAGAGGTGGAGCCC 58879495 Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | |||| | | | |||| | |||| || || | || ||||||||||| ||| | | Sbjct 58879494 AGTGACACCATAGAGAACG-TGAAGGCCAAGATCCAGGATAAAGAGGGCATTCCCCCTTA 58879436 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| | || |||| || ||||| ||||| || || | ||||| ||| || || Sbjct 58879435 CCAGCAGAGGCTGATCTTTGCTGGCAAGCAGCTAGAAGATGGCCGCACTCTCTCTGATTA 58879376 Query 40866 CAACATCC 40873 |||||||| Sbjct 58879375 CAACATCC 58879368 >seq12 Length=182815943 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/194 (71%), Gaps = 5/194 (3%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 ||||||||||| |||| || || || || ||| ||||||||| | || || || || Sbjct 121887297 AAAATGCAAATCTTCGAGAAGACCCTGACCAACAAGACCATCACCCTAGATGTGGAGCCC 121887356 Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAA---ATTCTCGACAAAGAGGGCATCCCCGC 40802 | |||| | | | |||| | |||| || | | | | ||||||||||| ||| | Sbjct 121887357 AGTGACACCATCGAGAACG-TGAAGGCAAGATCCAGGATAAAGAAAGAGGGCATTCCCCC 121887415 Query 40803 GGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGA 40862 ||||||||| | ||||||| || || || ||||| || || | |||||||| || Sbjct 121887416 TGACCAGCAAAGGCTCATCTTTGCAGGAAAGCAGCTAGAAGATGGCTGCACCCTCTCTGA 121887475 Query 40863 CTACAACATCCAGA 40876 ||||||||||||| Sbjct 121887476 TTACAACATCCAGA 121887489 >seq7 Length=104786220 Score = 87.8 bits (96), Expect = 2e-12 Identities = 75/93 (81%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 116803 GGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCA 116862 ||| |||||||| ||||||||||||||| | ||||| || |||||||| |||||||| Sbjct 35883118 GGTGGAGCGTTTTAGTCAGGAGGTGCAGGTTCCAGAGGCTCGCTGCTTCTATGGCTTTCA 35883059 Query 116863 GATCGCCATGGAGAACGTGCACTCGGAAATGTA 116895 ||| ||| ||||| || ||||| || ||||| Sbjct 35883058 GATTCTCATCGAGAATGTTCACTCAGAGATGTA 35883026 >seq18 Length=130317789 Score = 84.2 bits (92), Expect = 2e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 40792 GGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGC 40851 |||||||| | |||||||| | || || | |||||||||||||||||| || | ||| Sbjct 68987609 GGCATCCCACCTGACCAGCAGAGGCTGATATTCGCGGGCAAACAGCTGGAGGATGGCCGC 68987550 Query 40852 ACCCTCAACGACTACAACATCCAGAA 40877 ||||| |||||||||||||||||| Sbjct 68987549 ACCCTGTCCGACTACAACATCCAGAA 68987524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515184396943040