Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20spretus_20[genbank_20GCA_5F001624865.1_202016-04-26] 5,404 sequences; 2,625,587,472 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq3385 311 1e-79 seq17 288 1e-72 seq14 242 5e-59 seq3 120 4e-22 seq4 111 2e-19 seq7 102 1e-16 seq2 98.7 1e-15 seq18 91.5 2e-13 >seq3385 Length=62036 Score = 311 bits (344), Expect = 1e-79 Identities = 604/891 (68%), Gaps = 12/891 (1%) Strand=Plus/Minus Query 33278 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 33337 ||| ||| | | | | || || ||| || ||||| || || ||||| ||||| ||||| Sbjct 20963 CATGACTGCAAATCTCTGATACTCAGAAACTCGTTTCTCAAAGAAATTTGTTTTCCCTTC 20904 Query 33338 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCC 33397 ||||| || || ||||| |||||||| ||||| | | |||| ||| ||||| Sbjct 20903 TAATGAAATGTTCTCCATAAAATCAAAGGGATTTTCTGCCTGAAAAATCTTTGAGAATCC 20844 Query 33398 CAATTCAGAAATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATT 33457 | ||| || ||||| || || || || || || || |||| ||| || | || Sbjct 20843 AAGTTCTATAAGTAATCTGTCAGCTACAAACTCAATGTACTGTTTCGTCAAAACATAGTT 20784 Query 33458 CATTCCTATGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGC 33517 ||||| ||||| ||| || | || | || | ||| || || ||||| || || Sbjct 20783 AATTCCAATGAGGCCAACAGGCAAGGCTTCTGTTAAAAACTCCTGCTCAATTTGAACAGC 20724 Query 33518 ATTTGTTATAATAAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACAT 33577 || | || || || || | ||||| || |||| | || |||| Sbjct 20723 ATCAGCAATGATTTCCCTCACTCTGTCTTCTGAAGGCT--TGTACTGAA-------ACAT 20673 Query 33578 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGT 33637 || || || || || ||||| ||||| || || || || || | ||| || ||||| || Sbjct 20672 CAGGCAGGCAAAGTCACAGTGAAGACCTTCATCCCTGCTGATCAGTTCATTTGAAAAAGT 20613 Query 33638 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAA 33697 ||| | ||||| ||||| | ||| || ||||| ||||| | ||| |||||||| || || Sbjct 20612 CAGTTCAGGCATGAGGCCTCTCTTCTTTAGCCAGAATATTGCAGCAAATGATCCAGAGAA 20553 Query 33698 GAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG---CTGTC 33754 | | |||||||| || ||||||||||| | | ||| || ||| || | || || Sbjct 20552 GGAAATTCCTTCCACAGCAGCAAAGGCCACCACTCTTTCCCCAAAAGTAGATTTCCTATC 20493 Query 33755 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGC 33814 |||||| ||||||| || || || || || ||| | ||||| ||||| || || Sbjct 20492 TGCTATCCAGCGCAGAGCCCAGTCCGCTTTTTTCTTAACATATGGCATTGTTTCAATTGC 20433 Query 33815 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATA 33874 ||||| | | | | ||| || |||| | | ||||| || || | | ||| || Sbjct 20432 GTTAAATAAAAATTCCCTTTTCTTTGGATCTCTGATGTAAGTGTCTATTAGTAAACTGTA 20373 Query 33875 CATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGT 33934 ||| || || |||| || || ||| |||||||| || ||||| || || ||| | Sbjct 20372 CATCTCTGAGTGAACATTCTCGATGAGAATCTGAAAGCCATAGAAGCAGTGAGTCTCCGG 20313 Query 33935 AATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGC 33994 || |||||| || || ||| || || | || |||||||| || |||||||||||||| Sbjct 20312 AACCTGCACCTCCTGACTAAAACGCTCCACCAAGTTTTCATTTACAATTCCATCACTGGC 20253 Query 33995 TGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCA 34054 ||||||||| || || | || ||||| || || ||||| | | | || || ||||| Sbjct 20252 TGCAAAAAAGGCTAAGATGTGGGAGATAAAGTACTTCTCGTCGGATTTAAGCTTGTTCCA 20193 Query 34055 ATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 34114 | | || || || || | || || ||||| ||||||| || |||||| ||| | Sbjct 20192 GTGAGGGAGGTCCTTTGACAAGTCAACCTCTTCTTCTGTCCAGAAAGATGCCCGTGCTTG 20133 Query 34115 TTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCT 34165 |||||||| ||||||| ||| |||| |||||||| || || ||||| || Sbjct 20132 CTTATACATTCTCCAGATATCAGGATACTGGATTGGAAAGATGACAAACCT 20082 >seq17 Length=136257712 Score = 288 bits (318), Expect = 1e-72 Identities = 636/943 (67%), Gaps = 33/943 (3%) Strand=Plus/Plus Query 33236 TTAAAAGTCAACATCTAAAGAAAAATGATTGTCT-TCT--TGAGACATAACTCCCATTTT 33292 ||| |||||| ||| || | |||| ||| ||| || | ||||| |||||||| | Sbjct 93987351 TTAGAAGTCAGCATGCAAGGTAAAAGAATTCTCTGTCAAATTCGACATGACTCCCATCCT 93987410 Query 33293 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTC 33352 || || || || || | || || || || | ||||||||||| | ||| |||||||| Sbjct 93987411 CTGATACTCGCCTACTTGCTTCTCAAAGAAGTCTGTTTTTCCTTCTAGTGAAATATTTTC 93987470 Query 33353 CATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCA---GAAAT 33409 |||||| ||||| ||||| || || |||| || |||| |||| || | || Sbjct 93987471 CATGAAGTCAAATGGATTTTCTACTCTGAAAATCTTCTTAACACCCAGCTCCAGTGGAAG 93987530 Query 33410 CAATCTATCTGCGACGAA-TTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGA 33468 | || || || | || ||| || || ||||||| |||||| || | || Sbjct 93987531 C---CTGTCAGCCAAAAAATTCAATGTACTGCTTCATCAAAGTGCAATTCGCCCCGAAGA 93987587 Query 33469 GTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGT-TATA 33527 | || || || | |||| | || ||||| || || | || || | || || | | Sbjct 93987588 GCTTCACAGGCAAAGCCTCCGTGAGAAACTCCTGCCCTATCCTAACAGTGTTGGTGTTTT 93987647 Query 33528 ATAAATCTAACGGTTT-CTTCACTCGGTGGATGTAATAAATGTTTAAACATCAAACATGC 33586 || | | || |||| || || | | | | |||| | || || ||||||| || || Sbjct 93987648 ATTTCTTTTACTGTTTGCTCCAATGGCTTG-TGTACCAGGTGCTTGAACATCAGCCAGGC 93987706 Query 33587 GAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGG 33646 | || ||||| | |||||||||||| ||||| || || || |||| || || || Sbjct 93987707 AGAGTCCCAGTGTAAACCCTCGTCTCTGCTAATAAACTCATTGGAAAGTGTAAGGCCCAA 93987766 Query 33647 CATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCC 33706 ||| || | || || || ||||| ||||| || || |||||||| ||| Sbjct 93987767 CATCAGTCTGCGATTCTTGAGCCAGAATATCGATGC------------AAAGAAGACTCC 93987814 Query 33707 TTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGTCATGTATCCA 33763 ||| || ||||||||||| | || || |||||||| || | |||| |||| Sbjct 93987815 TTCCACCGCAGCAAAGGCCACAACTCATTCTCCATATGAGGACTCTTTGTCCCCAGTCCA 93987874 Query 33764 CTTTTGAGCCCAATCGGCCTTCTTTTTT---ACACAAGGCATCGTTTCTATGGCATTAAA 33820 ||||| || |||||||| || ||||||||||| |||| || ||||| || Sbjct 93987875 ACGCAAGGCCCAGTCAGCCTTCTTCTTCTTCACACAAGGCATTGTTTAAATAGCATTGAA 93987934 Query 33821 GAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTC 33880 |||||| | | |||| || |||||||| || || || || | |||| |||||||| Sbjct 93987935 GAGATATTCTCTTTCCTTGGGATCTTTAATGTACGTGTCAATAAGGGGACTGTACATTTC 93987994 Query 33881 CGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTG 33940 || || |||||||| ||||| | || || || |||||||| | ||||| |||| || Sbjct 93987995 AGAGTGTATGTTTTCCATGGCAGTTTGGAAGCCATAGAAACAGCGGGCCTCTGTAACTTG 93988054 Query 33941 CACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAA 34000 |||||| | |||||| || | || |||||||| ||||| |||||||| |||||||| Sbjct 93988055 AACTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTGACTATGCCATCACTCGCTGCAAA 93988114 Query 34001 AAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATT 34060 || |||| | || |||||||| | | || || || | || | ||| | | Sbjct 93988115 GAAAGCCAGAATGTGAGCTATAAAATGTCTCTCATCCAGTTTCAGAGCTTCCCAGTGTTG 93988174 Query 34061 GATATCTTTAGATATATCCA-CTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTAT 34119 ||| | || || | |||| |||||| | |||||||| || ||||| || || || | Sbjct 93988175 AATACCCTTGGAAAGGTCCACCTTCTT-GGCAGTCCAAAAGGAGGCCTCAGCTTTCTTGT 93988233 Query 34120 ACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 34162 |||| | |||||| ||||| |||| || || || | |||||| Sbjct 93988234 ACATCTGCCAGATATCATGGTATTCAATGGGAAAGACAACAAA 93988276 Score = 113 bits (124), Expect = 6e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 62619 GATCCTACATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAAT 62678 ||||| |||| || ||||| || || | || || ||||||| ||| || || || | Sbjct 91853968 GATCCCTCATACGTTTCATAGGGGCCATACTCCTTGGCTAGTTCACAGCTGGCTTCCAGG 91853909 Query 62679 GCACCGTAATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCA 62738 || || || ||||||||||||||||||| |||||||| || ||||| ||||| ||| Sbjct 91853908 GCTCCATAGTAAATGGTTTCAAAGATCTGCTTATTTAATAACTGGGCTTCTGGGCTCTCA 91853849 Query 62739 AATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGT 62798 || || || | | || || || || || ||||| ||||| || ||||| || || || Sbjct 91853848 AAGGGGTATCTCATCAGGATGAAAGCATCTGCTAAACCTTGTACCCCAATTCCAATGGGA 91853789 Query 62799 CTATGTCTCTTATTAGA 62815 | ||| | ||||| || Sbjct 91853788 CGATGGCGTTTATTTGA 91853772 Score = 113 bits (124), Expect = 6e-20 Identities = 107/137 (78%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 62388 ACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62447 || || ||||| || ||||| ||||| |||||||| || ||||||||||| || || | Sbjct 91856955 ACCTGAAATTCCCCTGACAAGACTCTTCGAGTGTAGATGTTACTGGTATAAGGCTCAATG 91856896 Query 62448 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62507 ||||||||||| |||| ||| || |||||||| ||||| ||||| || || | | |||| Sbjct 91856895 GACTCATTATTCCCCAGAATCTGGGCAGTTGAAGCAGTAGGCATTGGGGCAATAAGTAAA 91856836 Query 62508 CTATTTCTAAGACCGTA 62524 || || || | ||| || Sbjct 91856835 CTGTTCCTTATACCATA 91856819 Score = 93.3 bits (102), Expect = 5e-14 Identities = 116/159 (73%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 63642 CTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAAC 63701 ||||||| || | || | || || ||||| || | |||||||| || || || ||| Sbjct 91844438 CTAGACAGCTGTGGGCGGTTGGTCCCAGCATTGAAGAGAGTAGGAGAGGCATGAGTGAAC 91844379 Query 63702 CATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATT 63761 || || ||||||||||| ||||| || ||||| || | || ||||| || ||||| Sbjct 91844378 CACTTCTCAGAAAGTAGGTTGTAGGTTTCAATTGCAGCATCAATATCTTCTTTGTGAATC 91844319 Query 63762 CCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCA 63800 || || | || | ||| ||||| ||||| ||||||||| Sbjct 91844318 CCCACAGAAACCCTCATCAACATATGCTGTGGTCTTTCA 91844280 Score = 93.3 bits (102), Expect = 5e-14 Identities = 123/171 (72%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 62113 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 62172 |||| ||||| || |||||||| || |||||| || | || || || |||||||| | Sbjct 91860047 TCCAACCGTAGAAGTGCATACTAGTGAGTTTGCCGTAGTTGGGCTCAGCAATATGGATGT 91859988 Query 62173 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 62232 | | ||| || || ||||||||||| || || || || || ||||| || | | |||| Sbjct 91859987 TTAAAGACTGGCTCTGATCGATGAAAGCACCTCTCTCGGCTGCCATCTTGAGAACAGTCT 91859928 Query 62233 TTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 62283 | || | |||||||| | || ||||| | | |||| | || || |||| Sbjct 91859927 TCTGAGAGATTTCCCACACGGTCTTATAGAGTTGCTTCAGGTCATCAGGAA 91859877 >seq14 Length=152946536 Score = 242 bits (268), Expect = 5e-59 Identities = 619/928 (67%), Gaps = 28/928 (3%) Strand=Plus/Plus Query 33236 TTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGAG---ACATAACTCCCATTTT 33292 |||||||||| || | || | |||| ||| | || | || |||| || ||||| Sbjct 69609683 TTAAAAGTCAGCACCCAAGGTAAAAGAATTCT-TTGTGGAATTCACATGACGCCCATCCA 69609741 Query 33293 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTC 33352 || || || || || || || || || || || || |||||||| ||||| |||||||| Sbjct 69609742 CTGATACTCGCCTACTCGCTTCTCAAAGAAGTTTGTCTTTCCTTCTAATGAAATATTTTC 69609801 Query 33353 CATGAAATCAAACGGATTGGTAACATTGTAAAttttt-ttAAATCCCAATTCAGAAATCA 33411 |||||| ||||| ||||| || | ||| | || ||||| |||| || || | Sbjct 69609802 CATGAAGTCAAATGGATTTCCTACTCCGAAAAATCTTGTTAAAACCCAGCTCCAGCATAA 69609861 Query 33412 ATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGTT 33471 ||||| || || ||||| || || ||||||| || ||||| | ||||| Sbjct 69609862 GCCTATCGGCCACAAATTCAATGTACTGCTTCATCAAAGTGCAGTTCATCTCGATGAGCA 69609921 Query 33472 TAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATA-CCGCATTTGTTATAATA 33530 | || || | ||| | | || | | || || || || || | || || || || Sbjct 69609922 TCACAGGCAAGGCCTCCATGAGGATCCCCTGCTCTATCCCTAACCTCGTTGGTGATTATT 69609981 Query 33531 AATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACATCAAACATGCGAAA 33590 | | || | |||| | | | | |||| | || || ||||||| | | || Sbjct 69609982 TCTTTTACTCTG-CTTCGATGGCTTG-TGTACCAGGTGCTTGAACATCAGGTAGACAAAG 69610039 Query 33591 TCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATT 33650 || ||||| | ||||| |||||| ||||| | || || ||||| || | || ||||| Sbjct 69610040 TCCCAGTGTAAACCCTAGTCTCTGCTAATAAGCTCATTGGAAAATGTAGGGCCCGGCATC 69610099 Query 33651 AGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAA-GAAGATTCCTTC 33709 || || | || || ||||| ||||| || || || || || ||||| ||||||| |||| Sbjct 69610100 AGCCCCTGTTTCTTGAGCCAGAATATCGATGCAAAAGAACCAGAAAAAGAAGATTGCTTC 69610159 Query 33710 TACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATCCACTT 33766 ||| | |||||||| | || || ||| |||| | | | |||| |||| | Sbjct 69610160 TACCGTGGCAAAGGCCACAACTCGTTCTGCATATGTAACTTCTTTGTCCCCAGTCCAATG 69610219 Query 33767 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATA 33826 ||||| || ||||||| ||| |||||| ||||| || ||||| || ||||| Sbjct 69610220 CAAGGCCCAGTCAGCCTTCT------CAC-AGGCATTGTTTCAATAGCATTGAAAAGATA 69610272 Query 33827 GtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATG 33886 | | |||| || |||||||| ||| | || || | ||||| ||||||| || || Sbjct 69610273 TTCTCTTTCTTTGGGATCTTTAATGTAAATGTCAATAAGGAGACTGTACATTTTAGAGTG 69610332 Query 33887 AATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTC 33946 || |||| || | | | || || || ||||||| |||||| |||| || ||||| Sbjct 69610333 TATCCTTTCCCTGCCAGTTTAGAAGCCATA-AAACATCCAGCCTCTGTAACTTGAACTTC 69610391 Query 33947 TGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGC 34006 | | |||||| || | || ||| | || | ||| |||||||| |||||||| || || Sbjct 69610392 TTGGCTAAATCGCTCCACCAAGTTTGCGTTGAGTATGCCATCACTCGCTGCAAAGAAAGC 69610451 Query 34007 CAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATC 34066 || ||||| |||||||| | | || | | || |||| | |||| || Sbjct 69610452 CAGAACATGAGCTATAAAATTTCTGTCAT------TCAG-AGCTTCCCAGTGCTGATCTC 69610504 Query 34067 TTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATT 34126 || || | ||||| || || | |||||||| | ||||| || || || ||||| | Sbjct 69610505 CTTGGAAAGGTCCACCTCCTCATCAGTCCAAAAGGTGGCCTCAGCTTTCTTGTACATCTG 69610564 Query 34127 CCAGATGTCATGATATTGGATTGGGAAA 34154 |||||| ||||| || | || ||||||| Sbjct 69610565 CCAGATATCATGGTACTAGA-TGGGAAA 69610591 >seq3 Length=125065471 Score = 120 bits (132), Expect = 4e-22 Identities = 233/344 (68%), Gaps = 9/344 (3%) Strand=Plus/Plus Query 162449 CTTTTGCCAACACAAAGGGTGGATATTTGTTCATTGGAGTTGATAATAATACACACAAAG 162508 ||||| ||||||| | || ||||||||||||||||| | ||| || || || || Sbjct 83590141 CTTTTACCAACACTGAAGGGGGATATTTGTTCATTGGTTTGGATGGCAAAACCCAGCAAA 83590200 Query 162509 TAATTGGATTCACGGTGGGTCACGACTACCTCAAACTGGTAGAGAGAGATATAGAAAAGT 162568 | ||||| || | | | || | ||| || ||||||| || |||||||||| Sbjct 83590201 TTATTGGTTTTGAAGCAGAGAAGAACGATCTCGTGCTTCTAGAGAGTGAAATAGAAAAGT 83590260 Query 162569 ATATCCAAAAACTTCCTGTTGTGCATTTCTGCAAGAAAAAAGAGGACATCAAGTACGCAT 162628 |||||| | || ||||| || ||||| ||| || ||| | || || ||| ||| Sbjct 83590261 GCATCCAACAGCTGCCTGTCACTCACTTCTGTGGGAAGAAGGAGAAGATAAAATACACAT 83590320 Query 162629 GTAGATTCATCAAGGTGTATAAACCTGGTGATGAGACTACCTCGACATATGTGTGCGCAA 162688 | | ||||||| | ||| | ||| | || | || | | |||||||||| || Sbjct 83590321 GCAAATTCATCGAAGTGCACAAATCCGGAGCTGTG------TGTGCATATGTGTGTGCGC 83590374 Query 162689 TCAAAGTGGAAAGATGCTGCTGTGCTGTGTTTGCGGATTGGCCAGAATCATGGTACATGG 162748 ||| |||||| |||| ||||||||| ||||| || | ||| || || ||| || ||| Sbjct 83590375 TCAGAGTGGAGAGATTCTGCTGTGCAGTGTTCGCTGCAGAGCCCGAGTCCTGGCACGTGG 83590434 Query 162749 ATACTAGTGGTAGTATGAAGAAGTATTCTCCAGATGAATGGGTG 162792 | | || || |||||| || | | |||| ||||||||| Sbjct 83590435 A---AGGCGGCTGTGTGAAGAGGTTTACCACAGAGGAATGGGTG 83590475 Score = 114 bits (126), Expect = 2e-20 Identities = 234/344 (68%), Gaps = 13/344 (4%) Strand=Plus/Plus Query 162451 TTTGCCAACACAAAGGGTGGATATTTGTTCATTGGAGTTGATAATAATACACACAAAGTA 162510 ||||| ||||| | || ||||||||||||||||| | ||| || || || || | Sbjct 83528706 TTTGCAAACACTGATGGGGGATATTTGTTCATTGGCTTGGATGGCAAAACGCAGCAAATT 83528765 Query 162511 ATTGGATTC-ACGGTGGGTCACGA-CTACCTCAAACTGGTAGAGAGAGATATAGAAAAGT 162568 ||||| || | | | | | || | | ||| || ||||||| || |||||||||| Sbjct 83528766 ATTGGTTTTGAAGCAGAG--AAGAGCGATCTCGTGCTTCTAGAGAGTGAAATAGAAAAGT 83528823 Query 162569 ATATCCAAAAACTTCCTGTTGTGCATTTCTGCAAGAAAAAAGAGGACATCAAGTACGCAT 162628 |||||| | || ||||| || ||||| || | || ||| | ||||||||| | | Sbjct 83528824 GCATCCAACAGCTGCCTGTCACTCACTTCTGTGAGGAGAAGGAGAAGATCAAGTACACGT 83528883 Query 162629 GTAGATTCATCAAGGTGTATAAACCTGGTGATGAGACTACCTCGACATATGTGTGCGCAA 162688 | | ||||||| | ||| | ||| | || | || | | | |||||||||||| | Sbjct 83528884 GCAAATTCATCGAAGTGCACAAATCCGGAGCTGTGTGTGC------ATATGTGTGCGCGA 83528937 Query 162689 TCAAAGTGGAAAGATGCTGCTGTGCTGTGTTTGCGGATTGGCCAGAATCATGGTACATGG 162748 ||| |||||| | | ||||||||| ||||| || | ||| || || ||| || ||| Sbjct 83528938 TCAGAGTGGAGAAGTTCTGCTGTGCAGTGTTCGCTGCAGAGCCTGAGTCCTGGCACGTGG 83528997 Query 162749 ATACTAGTGGTAGTATGAAGAAGTATTCTCCAGATGAATGGGTG 162792 | | | || |||||| || | | |||| ||||||||| Sbjct 83528998 A---AGGCAGCTGTGTGAAGAGGTTTACCACAGAGGAATGGGTG 83529038 Score = 105 bits (116), Expect = 8e-18 Identities = 232/344 (67%), Gaps = 13/344 (4%) Strand=Plus/Plus Query 162451 TTTGCCAACACAAAGGGTGGATATTTGTTCATTGGAGTTGATAATAATACACA-CAAAGT 162509 ||||| ||||| | || ||||||||||||||||| | ||| || || || |||| | Sbjct 83556489 TTTGCAAACACTGAAGGGGGATATTTGTTCATTGGCTTGGATGGCAAAACGCAGCAAATT 83556548 Query 162510 AATTGGATTCACGGTGGGTCACGA-CTACCTCAAACTGGTAGAGAGAGATATAGAAAAGT 162568 | | | || | | | | | || | | |||| || ||||||| || |||||||||| Sbjct 83556549 ATTGGTTTTGAAGCAGAG--AAGAGCAATCTCATGCTTCTAGAGAGTGAAATAGAAAAGT 83556606 Query 162569 ATATCCAAAAACTTCCTGTTGTGCATTTCTGCAAGAAAAAAGAGGACATCAAGTACGCAT 162628 |||||| | || ||||| || ||||| | | || ||| | || || ||| ||| Sbjct 83556607 GCATCCAACAGCTGCCTGTCACTCACTTCTGTGGGGAGAAGGAGAAGATAAAATACACAT 83556666 Query 162629 GTAGATTCATCAAGGTGTATAAACCTGGTGATGAGACTACCTCGACATATGTGTGCGCAA 162688 | | ||||||| | ||| ||| | || | || | | |||||||||| || Sbjct 83556667 GCAAATTCATCGAAGTGCGCAAATCCGGAGCTGTG------TGTGCATATGTGTGTGCGC 83556720 Query 162689 TCAAAGTGGAAAGATGCTGCTGTGCTGTGTTTGCGGATTGGCCAGAATCATGGTACATGG 162748 ||| ||| || || | ||||||||| ||||| || | ||| || || ||| || ||| Sbjct 83556721 TCAGAGTAGAGAGGTTCTGCTGTGCAGTGTTCGCTGCAGAGCCTGAGTCCTGGCACGTGG 83556780 Query 162749 ATACTAGTGGTAGTATGAAGAAGTATTCTCCAGATGAATGGGTG 162792 | |||| || |||||| || | | |||| ||||||||| Sbjct 83556781 A---AGGTGGCTGTGTGAAGAGGTTTACCACAGAGGAATGGGTG 83556821 >seq4 Length=114123490 Score = 111 bits (122), Expect = 2e-19 Identities = 97/121 (80%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 33604 CCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33663 |||||||||| ||||| | || || ||||| || || || ||||| || || || || | Sbjct 16582949 CCTCGTCTCTGCTAATAAGCTCATTGGAAAATGTAAGGCCCGGCATCAGCCCCCGTTTCT 16582890 Query 33664 TAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33723 | ||||| ||||| || || || || ||||||||||||||||||||||| || ||||||| Sbjct 16582889 TGAGCCAGAATATTGATGCAAAAGAACCGGAAAAGAAGATTCCTTCTACGGCGGCAAAGG 16582830 Query 33724 C 33724 | Sbjct 16582829 C 16582829 Score = 86.0 bits (94), Expect = 8e-12 Identities = 103/138 (75%), Gaps = 3/138 (2%) Strand=Plus/Minus Query 33236 TTAAAAGTCAACATCTAAAGAAAAATGATTGTCT-TCT--TGAGACATAACTCCCATTTT 33292 ||| |||||| |||| || | |||| || ||| || | ||||| |||||||| | Sbjct 16584336 TTAGAAGTCAGCATCCAAGGTAAAAGAGTTCTCTGTCGAATTCGACATGACTCCCATCCT 16584277 Query 33293 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTC 33352 || || || || || || || || || || || || |||||||| | ||| |||||||| Sbjct 16584276 CTGATACTCGCCTACTCGCTTCTCAAAGAAGTTTGTCTTTCCTTCTAGTGAGATATTTTC 16584217 Query 33353 CATGAAATCAAACGGATT 33370 |||||| ||||||||||| Sbjct 16584216 CATGAAGTCAAACGGATT 16584199 Score = 86.0 bits (94), Expect = 8e-12 Identities = 103/138 (75%), Gaps = 3/138 (2%) Strand=Plus/Minus Query 33236 TTAAAAGTCAACATCTAAAGAAAAATGATTGTCT-TCT--TGAGACATAACTCCCATTTT 33292 ||| |||||| |||| || | |||| || ||| || | ||||| |||||||| | Sbjct 16585149 TTAGAAGTCAGCATCCAAGGTAAAAGAGTTCTCTGTCGAATTCGACATGACTCCCATCCT 16585090 Query 33293 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTC 33352 || || || || || || || || || || || || |||||||| | ||| |||||||| Sbjct 16585089 CTGATACTCGCCTACTCGCTTCTCAAAGAAGTTTGTCTTTCCTTCTAGTGAGATATTTTC 16585030 Query 33353 CATGAAATCAAACGGATT 33370 |||||| ||||||||||| Sbjct 16585029 CATGAAGTCAAACGGATT 16585012 >seq7 Length=104786220 Score = 102 bits (112), Expect = 1e-16 Identities = 94/119 (79%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 33606 TCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 33665 || || || || || | ||| || ||||| || ||||| ||||| ||||| | ||| || Sbjct 35873931 TCATCCCTGCTGATCAGTTCATTTGAAAAAGTCAGTCCAGGCATGAGGCCTCTCTTCTTT 35873990 Query 33666 AGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGC 33724 ||||| ||||| | ||| |||||||| || ||||| |||||||| || ||||||||||| Sbjct 35873991 AGCCAGAATATTGCAGCAAATGATCCAGAGAAGAAAATTCCTTCCACAGCAGCAAAGGC 35874049 >seq2 Length=131945496 Score = 98.7 bits (108), Expect = 1e-15 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 188489 GTTACTTTCTATGATGCGCGTATCGTTATACAAGCTTTCATGTTGACTACTGCAGTGTTT 188548 ||||| |||||||||| | | ||| | ||||| || || ||||||||||||| ||| Sbjct 120919975 GTTACCTTCTATGATGTATATCTGGTTCTGCAAGCGTTTATAATGACTACTGCAGTCTTT 120920034 Query 188549 CTTGCTCTGACTACATGTACTCTACAATCAAAGAGAGATTTCAGTAAACTTGTAACAGG 188607 |||| ||||| | | |||||||||||||||||||||||||| ||| | | | |||| Sbjct 120920035 CTTGGCTTGACTGCCTATACTCTACAATCAAAGAGAGATTTCACCAAATTCGGAGCAGG 120920093 Score = 84.2 bits (92), Expect = 3e-11 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 188173 GCTCCTCCATCGAGGACGACTTCAACTATGACAGCTCGGTGGCGTCTGCCAGCGTGCACA 188232 |||| ||||||||||| ||||||||||| | ||||| |||||||| ||||||||||||| Sbjct 120904529 GCTCGTCCATCGAGGATGACTTCAACTACGGCAGCTGCGTGGCGTCGGCCAGCGTGCACA 120904588 Query 188233 TACGAATGG 188241 | || |||| Sbjct 120904589 TCCGTATGG 120904597 >seq18 Length=130317789 Score = 91.5 bits (100), Expect = 2e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 80988 CCGTGATAGGTATCGATGAAGGACAGTTCTTTCCAGACATTGTTGAATTCTGTGAGCGTA 81047 |||| || || ||||||||||| ||||| ||||| |||||||| || |||||||| | Sbjct 127348853 CCGTCATTGGCATCGATGAAGGGCAGTTTTTTCCTGACATTGTGGATTTCTGTGAAATGA 127348794 Query 81048 TGGCAAACGAAGGAAAAATAGTTATAGTAGCCGCGCTCGATGGGACATTTCAACGTAGAC 81107 |||| ||||| || || | ||| || || || || || |||||||| || || | | Sbjct 127348793 TGGCCAACGAGGGCAAGACAGTAATTGTGGCAGCACTGGATGGGACTTTCCAGAGGAAGG 127348734 Query 81108 CGTTTAATAATATTTTGAATCTTATTCCATTATCTGAAATGGTGGTAAAACTAACTGCAG 81167 | || | || ||||| || | || | | || | ||||| || || || || | Sbjct 127348733 CTTTCGGCAGCATCTTGAACCTGGTGCCCCTGGCGGAGAGTGTGGTGAAGCTCACCGCTG 127348674 Query 81168 TGTGTATGAAATGCTTTAAGGAGGCTTCCT 81197 |||| ||| | |||||| || ||| ||| Sbjct 127348673 TGTGCATGGAGTGCTTTCGAGAAGCTGCCT 127348644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629775055821120