Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20spretus_20[genbank_20GCA_5F001624865.1_202016-04-26] 5,404 sequences; 2,625,587,472 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq3385 324 2e-83 seq17 262 6e-65 seq14 251 1e-61 seq4 129 8e-25 seq3 125 1e-23 seq18 116 5e-21 >seq3385 Length=62036 Score = 324 bits (358), Expect = 2e-83 Identities = 607/891 (68%), Gaps = 12/891 (1%) Strand=Plus/Minus Query 49656 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 49715 ||| ||| | | | | || || ||| || ||||| || || ||||| ||||| ||||| Sbjct 20963 CATGACTGCAAATCTCTGATACTCAGAAACTCGTTTCTCAAAGAAATTTGTTTTCCCTTC 20904 Query 49716 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCC 49775 ||||| || || ||||| |||||||| ||||| | | | |||| ||| ||||| Sbjct 20903 TAATGAAATGTTCTCCATAAAATCAAAGGGATTTTCTGCCTGAAAAATCTTTGAGAATCC 20844 Query 49776 CAATTCAGAAATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATT 49835 | ||| || ||||| || || ||||| || || || |||| ||| || | || Sbjct 20843 AAGTTCTATAAGTAATCTGTCAGCTACAAACTCAATGTACTGTTTCGTCAAAACATAGTT 20784 Query 49836 CATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGC 49895 ||||| || || ||| || | || | || | ||| || || ||||| || || Sbjct 20783 AATTCCAATGAGGCCAACAGGCAAGGCTTCTGTTAAAAACTCCTGCTCAATTTGAACAGC 20724 Query 49896 ATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACAT 49955 ||| | || || || || | ||||| || | || | || |||||| Sbjct 20723 ATCAGCAATGATTTCCCTCACTCTGTCTTC------TGAAGGCTTGTACTG---AAACAT 20673 Query 49956 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGT 50015 || || || || || ||||| ||||| || || || || || ||||| || ||||| || Sbjct 20672 CAGGCAGGCAAAGTCACAGTGAAGACCTTCATCCCTGCTGATCAGTTCATTTGAAAAAGT 20613 Query 50016 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAA 50075 ||| | ||||| ||||| | ||| || ||||| ||||| | |||||||| ||||| || Sbjct 20612 CAGTTCAGGCATGAGGCCTCTCTTCTTTAGCCAGAATATTGCAGCAAATGATCCAGAGAA 20553 Query 50076 GAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCG---CTGTC 50132 | | |||||||| || || |||||||| || | ||| || ||| || | | || || Sbjct 20552 GGAAATTCCTTCCACAGCAGCAAAGGCCACCACTCTTTCCCCAAAAGTAGATTTCCTATC 20493 Query 50133 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGC 50192 |||||| ||||||| || || || || || ||| | ||||| ||||| || || Sbjct 20492 TGCTATCCAGCGCAGAGCCCAGTCCGCTTTTTTCTTAACATATGGCATTGTTTCAATTGC 20433 Query 50193 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATA 50252 ||||| | | | | ||| || |||| | | ||||| || || | | ||| || Sbjct 20432 GTTAAATAAAAATTCCCTTTTCTTTGGATCTCTGATGTAAGTGTCTATTAGTAAACTGTA 20373 Query 50253 CATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGT 50312 ||| || || |||| || || ||| |||||||| || ||||| || || ||| | Sbjct 20372 CATCTCTGAGTGAACATTCTCGATGAGAATCTGAAAGCCATAGAAGCAGTGAGTCTCCGG 20313 Query 50313 AATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGC 50372 || |||||| || || ||| || || | || |||||||| || ||||| |||||||| Sbjct 20312 AACCTGCACCTCCTGACTAAAACGCTCCACCAAGTTTTCATTTACAATTCCATCACTGGC 20253 Query 50373 TGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCA 50432 ||||||||| || || | || ||||| | || |||| || | | || || ||||| Sbjct 20252 TGCAAAAAAGGCTAAGATGTGGGAGATAAAGTACTTCTCGTCGGATTTAAGCTTGTTCCA 20193 Query 50433 ATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 50492 | | || || || || | || || ||||| ||||||| || |||||| ||| | Sbjct 20192 GTGAGGGAGGTCCTTTGACAAGTCAACCTCTTCTTCTGTCCAGAAAGATGCCCGTGCTTG 20133 Query 50493 TTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCT 50543 |||||||| ||||||| ||| |||| |||||||| || || ||||| || Sbjct 20132 CTTATACATTCTCCAGATATCAGGATACTGGATTGGAAAGATGACAAACCT 20082 >seq17 Length=136257712 Score = 262 bits (290), Expect = 6e-65 Identities = 603/900 (67%), Gaps = 30/900 (3%) Strand=Plus/Plus Query 49654 GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCT 49713 ||||| |||||||| | || || || || || | || || || || | ||||||||| Sbjct 93987394 GACATGACTCCCATCCTCTGATACTCGCCTACTTGCTTCTCAAAGAAGTCTGTTTTTCCT 93987453 Query 49714 TCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAAT 49773 || | ||| |||||||||||||| ||||| ||||| || | |||| || |||| Sbjct 93987454 TCTAGTGAAATATTTTCCATGAAGTCAAATGGATTTTCTACTCTGAAAATCTTCTTAACA 93987513 Query 49774 CCCAATTCA---GAAATCAATCTATCCGCGACAAA-TTCTATATATGTTTTCATCATTTC 49829 |||| || | || | || || || | ||| ||| || || ||||||| Sbjct 93987514 CCCAGCTCCAGTGGAAGC---CTGTCAGCCAAAAAATTCAATGTACTGCTTCATCAAAGT 93987570 Query 49830 ACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGA 49889 |||||| || | || || || || | |||| | || ||||| || || | || Sbjct 93987571 GCAATTCGCCCCGAAGAGCTTCACAGGCAAAGCCTCCGTGAGAAACTCCTGCCCTATCCT 93987630 Query 49890 TACCGCATCTGT-TATAATAGATCTAACGGTTT-CTTCACTCGGTGGATGCAATAAATGT 49947 || | | || | | || | | || |||| || || | | | | || | | || Sbjct 93987631 AACAGTGTTGGTGTTTTATTTCTTTTACTGTTTGCTCCAATGGCTTG-TGTACCAGGTGC 93987689 Query 49948 TTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTG 50007 || ||||||| || || | || ||||| | |||||||||||| ||||| | || ||| Sbjct 93987690 TTGAACATCAGCCAGGCAGAGTCCCAGTGTAAACCCTCGTCTCTGCTAATAAACTCATTG 93987749 Query 50008 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGAC 50067 |||| || || || ||| || | || || || ||||| ||||| || ||||| Sbjct 93987750 GAAAGTGTAAGGCCCAACATCAGTCTGCGATTCTTGAGCCAGAATATCGATGCAAA---- 93987805 Query 50068 CCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG-- 50125 ||||| |||||| || || |||||||| |||| || |||||||| || Sbjct 93987806 --------GAAGACTCCTTCCACCGCAGCAAAGGCCACAACTCATTCTCCATATGAGGAC 93987857 Query 50126 -CGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTT---ACACAAGGCATC 50181 | |||| |||| ||||| || |||||||| || ||||||||||| Sbjct 93987858 TCTTTGTCCCCAGTCCAACGCAAGGCCCAGTCAGCCTTCTTCTTCTTCACACAAGGCATT 93987917 Query 50182 GTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATC 50241 |||| || ||||| |||||||| | | |||| || |||||||| || || || || Sbjct 93987918 GTTTAAATAGCATTGAAGAGATATTCTCTTTCCTTGGGATCTTTAATGTACGTGTCAATA 93987977 Query 50242 AAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACAT 50301 | |||| |||||||| || || |||||||| ||||| | || || || |||||||| Sbjct 93987978 AGGGGACTGTACATTTCAGAGTGTATGTTTTCCATGGCAGTTTGGAAGCCATAGAAACAG 93988037 Query 50302 CTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATT 50361 | ||||| |||| || |||||| | |||||| || | || |||||||| ||||| Sbjct 93988038 CGGGCCTCTGTAACTTGAACTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTGACTATG 93988097 Query 50362 CCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTT 50421 || ||||| |||||||| || |||| | || |||||||||| | || | || | Sbjct 93988098 CCATCACTCGCTGCAAAGAAAGCCAGAATGTGAGCTATAAAATGTCTCTCATCCAGTTTC 93988157 Query 50422 AGTTTATTCCAATCATTGATATCTTTAGATATATCTA-CTTCTTCCACTGTCCAAAATGA 50480 || | ||| | | ||| | || || | || | |||||| | |||||||| || Sbjct 93988158 AGAGCTTCCCAGTGTTGAATACCCTTGGAAAGGTCCACCTTCTT-GGCAGTCCAAAAGGA 93988216 Query 50481 TGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 50540 ||||| || || || ||||| | |||||| ||||| |||| || || || | |||||| Sbjct 93988217 GGCCTCAGCTTTCTTGTACATCTGCCAGATATCATGGTATTCAATGGGAAAGACAACAAA 93988276 Score = 107 bits (118), Expect = 3e-18 Identities = 106/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 79060 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACC 79119 || |||||||| || ||||| ||||| |||||||| || ||||||||||| || || | Sbjct 91856955 ACCTGAAATTCCCCTGACAAGACTCTTCGAGTGTAGATGTTACTGGTATAAGGCTCAATG 91856896 Query 79120 GATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAA 79179 || |||||||| |||| ||| || |||||||| || || ||||| || || | | |||| Sbjct 91856895 GACTCATTATTCCCCAGAATCTGGGCAGTTGAAGCAGTAGGCATTGGGGCAATAAGTAAA 91856836 Query 79180 CTATTTCTAAGACCGTA 79196 || || || | ||| || Sbjct 91856835 CTGTTCCTTATACCATA 91856819 Score = 105 bits (116), Expect = 1e-17 Identities = 136/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 79300 TATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAA 79359 || |||||||| || || | || | ||||| |||||| || || || | ||||| || Sbjct 91853959 TACGTTTCATAGGGGCCATACTCCTTGGCTAGTTCACAGCTGGCTTCCAGGGCTCCATAG 91853900 Query 79360 TAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAA 79419 ||||||||||| || |||| |||||| | || |||||| |||| ||||| || || Sbjct 91853899 TAAATGGTTTCAAAGATCTGCTTATTTAATAACTGGGCTTCTGGGCTCTCAAAGGGGTAT 91853840 Query 79420 TTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 79479 | | || || || || |||||||| ||||| || ||||| || || || | ||| | Sbjct 91853839 CTCATCAGGATGAAAGCATCTGCTAAACCTTGTACCCCAATTCCAATGGGACGATGGCGT 91853780 Query 79480 TTATTAGA 79487 ||||| || Sbjct 91853779 TTATTTGA 91853772 Score = 96.9 bits (106), Expect = 5e-15 Identities = 124/171 (73%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 78785 TCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 78844 |||| |||||||| |||||||| || |||||| || | || || || |||||||| | Sbjct 91860047 TCCAACCGTAGAAGTGCATACTAGTGAGTTTGCCGTAGTTGGGCTCAGCAATATGGATGT 91859988 Query 78845 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 78904 | | ||| || || ||||||||||| || || || || || ||||| || | | |||| Sbjct 91859987 TTAAAGACTGGCTCTGATCGATGAAAGCACCTCTCTCGGCTGCCATCTTGAGAACAGTCT 91859928 Query 78905 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 78955 | || | |||||||| | || ||||| | | |||| | || || |||| Sbjct 91859927 TCTGAGAGATTTCCCACACGGTCTTATAGAGTTGCTTCAGGTCATCAGGAA 91859877 >seq14 Length=152946536 Score = 251 bits (278), Expect = 1e-61 Identities = 621/929 (67%), Gaps = 30/929 (3%) Strand=Plus/Plus Query 49614 TTAAAAGTCAACATCTAGAGAAAAATGATTATCTTCTTGAG---ACATAACTCCCATTTT 49670 |||||||||| || | | | |||| ||| | || | || |||| || ||||| Sbjct 69609683 TTAAAAGTCAGCACCCAAGGTAAAAGAATTCT-TTGTGGAATTCACATGACGCCCATCCA 69609741 Query 49671 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTC 49730 || || || || || || || || || || || || |||||||| ||||| |||||||| Sbjct 69609742 CTGATACTCGCCTACTCGCTTCTCAAAGAAGTTTGTCTTTCCTTCTAATGAAATATTTTC 69609801 Query 49731 CATGAAATCAAACGGATTGGTAACATT-ATAAAtttttttAAATCCCAATTCAGAAATCA 49789 |||||| ||||| ||||| || | |||| || ||||| |||| || || | Sbjct 69609802 CATGAAGTCAAATGGATTTCCTACTCCGAAAAATCTTGTTAAAACCCAGCTCCAGCATAA 69609861 Query 49790 ATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTT 49849 ||||| || |||||||| || || ||||||| || ||||| | || || Sbjct 69609862 GCCTATCGGCCACAAATTCAATGTACTGCTTCATCAAAGTGCAGTTCATCTCGATGAGCA 69609921 Query 49850 TAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATA-CCGCATCTGTTATAATA 49908 | || || | ||| | | || | | || || || || || | | || || || Sbjct 69609922 TCACAGGCAAGGCCTCCATGAGGATCCCCTGCTCTATCCCTAACCTCGTTGGTGATTATT 69609981 Query 49909 GATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAA 49968 | | || | |||| | | | | || | | || || ||||||| | | || Sbjct 69609982 TCTTTTACTCTG-CTTCGATGGCTTG-TGTACCAGGTGCTTGAACATCAGGTAGACAAAG 69610039 Query 49969 TCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATT 50028 || ||||| | ||||| |||||| ||||| || || |||||||| || | || ||||| Sbjct 69610040 TCCCAGTGTAAACCCTAGTCTCTGCTAATAAGCTCATTGGAAAATGTAGGGCCCGGCATC 69610099 Query 50029 AGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAA-GAAGATTCCTTC 50087 || || | || || ||||| ||||| || ||||| || |||||||| ||||||| |||| Sbjct 69610100 AGCCCCTGTTTCTTGAGCCAGAATATCGATGCAAAAGAACCAGAAAAAGAAGATTGCTTC 69610159 Query 50088 TACTGCGGCAAAGGCAACAAGTCTCTCTCCA----TAACTGGCGCTGTCATGTATCCACT 50143 ||| | ||||||||| |||| || ||| || ||||| | |||| |||| | Sbjct 69610160 TACCGTGGCAAAGGCCACAACTCGTTCTGCATATGTAACT-TCTTTGTCCCCAGTCCAAT 69610218 Query 50144 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGAT 50203 ||||| || ||||||| ||| |||||| ||||| || ||||| || |||| Sbjct 69610219 GCAAGGCCCAGTCAGCCTTCT------CAC-AGGCATTGTTTCAATAGCATTGAAAAGAT 69610271 Query 50204 AGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAAT 50263 | | | |||| || |||||||| ||| | || || | ||||| ||||||| || | Sbjct 69610272 ATTCTCTTTCTTTGGGATCTTTAATGTAAATGTCAATAAGGAGACTGTACATTTTAGAGT 69610331 Query 50264 GAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTT 50323 | || |||| || | | | || || || ||||||| |||||| |||| || |||| Sbjct 69610332 GTATCCTTTCCCTGCCAGTTTAGAAGCCATA-AAACATCCAGCCTCTGTAACTTGAACTT 69610390 Query 50324 CTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACG 50383 || | |||||| || | || ||| | || | ||| || ||||| |||||||| || | Sbjct 69610391 CTTGGCTAAATCGCTCCACCAAGTTTGCGTTGAGTATGCCATCACTCGCTGCAAAGAAAG 69610450 Query 50384 CCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATCATTGATAT 50443 ||| ||||| |||||||| | | || || | | |||| | |||| | Sbjct 69610451 CCAGAACATGAGCTATAAAATTTCTGTCATTCAGAG-------CTTCCCAGTGCTGATCT 69610503 Query 50444 CTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATAT 50503 | || || | || || || || | |||||||| | ||||| || || || ||||| | Sbjct 69610504 CCTTGGAAAGGTCCACCTCCTCATCAGTCCAAAAGGTGGCCTCAGCTTTCTTGTACATCT 69610563 Query 50504 TCCAGATGTCATGATATTGGATTGGGAAA 50532 |||||| ||||| || | || ||||||| Sbjct 69610564 GCCAGATATCATGGTACTAGA-TGGGAAA 69610591 >seq4 Length=114123490 Score = 129 bits (142), Expect = 8e-25 Identities = 104/126 (83%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 49982 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 50041 |||||||||| ||||| || || |||||||| || || || ||||| || || || || | Sbjct 16582949 CCTCGTCTCTGCTAATAAGCTCATTGGAAAATGTAAGGCCCGGCATCAGCCCCCGTTTCT 16582890 Query 50042 TAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGG 50101 | ||||| ||||| || ||||| || || |||||||||||||||||||| |||||||||| Sbjct 16582889 TGAGCCAGAATATTGATGCAAAAGAACCGGAAAAGAAGATTCCTTCTACGGCGGCAAAGG 16582830 Query 50102 CAACAA 50107 | |||| Sbjct 16582829 CCACAA 16582824 >seq3 Length=125065471 Score = 125 bits (138), Expect = 1e-23 Identities = 239/347 (69%), Gaps = 19/347 (5%) Strand=Plus/Plus Query 183108 TTTGCCAACACGGATGGTGGATATTTGTTCATTGGAGTTGATAATAATACACA-CAAAGT 183166 ||||| ||||| ||||| ||||||||||||||||| | ||| || || || |||| | Sbjct 83528706 TTTGCAAACACTGATGGGGGATATTTGTTCATTGGCTTGGATGGCAAAACGCAGCAAATT 83528765 Query 183167 AGTTGGATTCACGGTGGGTCAAGA-CTACCTCAAACTGGTAGAGAGTGATATAGAAAAGT 183225 | | | || | | | | |||| | | ||| || |||||||||| |||||||||| Sbjct 83528766 ATTGGTTTTGAAGCAGAG--AAGAGCGATCTCGTGCTTCTAGAGAGTGAAATAGAAAAGT 83528823 Query 183226 ATATCAAAAGACTTCGTGTTGTGCATTTCTGTGAGAAGAAAGAGGACATCAAGTACGCGT 183285 ||| || || | ||| || ||||||||| |||| ||| | ||||||||| ||| Sbjct 83528824 GCATCCAACAGCTGCCTGTCACTCACTTCTGTGAGGAGAAGGAGAAGATCAAGTACACGT 83528883 Query 183286 GTCGATTCATCAAGGTGTATAAACCTGGGGAGGAGACTACCTCGACATACGTGTGCGCTA 183345 | ||||||| | ||| | ||| | || | || | |||| |||||||| | Sbjct 83528884 GCAAATTCATCGAAGTGCACAAATCCGGAG------CTGTGTGTGCATATGTGTGCGCGA 83528937 Query 183346 TCAAAGTGGAAAGATGCTGCTGTGCCGTGTT---TGCAGATTGGCCAGAATCATGGTACA 183402 ||| |||||| | | ||||||||| ||||| |||||| ||| || || ||| || Sbjct 83528938 TCAGAGTGGAGAAGTTCTGCTGTGCAGTGTTCGCTGCAGA---GCCTGAGTCCTGGCACG 83528994 Query 183403 TGGATACTAGTGGTAGTATGAAGAAGTATTCTCCAGATGAATGGGTG 183449 |||| | | || |||||| || | | |||| ||||||||| Sbjct 83528995 TGGA---AGGCAGCTGTGTGAAGAGGTTTACCACAGAGGAATGGGTG 83529038 Score = 114 bits (126), Expect = 2e-20 Identities = 238/349 (68%), Gaps = 19/349 (5%) Strand=Plus/Plus Query 183106 CTTTTGCCAACACGGATGGTGGATATTTGTTCATTGGAGTTGATAATAATACACA-CAAA 183164 ||||||| ||||||||||| |||| |||||||||||| | ||| || || || |||| Sbjct 83413526 CTTTTGCAAACACGGATGGGGGATTTTTGTTCATTGGTTTGGATGGCAAAACCCAGCAAA 83413585 Query 183165 GTAGTTGGATTCACGGTGGGTCAAGA-CTACCTCAAACTGGTAGAGAGTGATATAGAAAA 183223 || | | || | | | | |||| | | ||| || |||||||||| |||||||| Sbjct 83413586 TTATTGGTTTTGAAGCAGAG--AAGAGCGATCTCGTGCTTCTAGAGAGTGAAATAGAAAA 83413643 Query 183224 GTATATCAAAAGACTTCGTGTTGTGCATTTCTGTGAGAAGAAAGAGGACATCAAGTACGC 183283 | | ||| || | ||| || ||||||||| |||| ||| | ||||||||| | Sbjct 83413644 GCACATCCGGCAGCTGCCTGTCACTCACTTCTGTGAGGAGAAGGAGAAGATCAAGTACAC 83413703 Query 183284 GTGTCGATTCATCAAGGTGTATAAACCTGGGGAGGAGACTACCTCGACATACGTGTGCGC 183343 ||| ||||||| | ||| | ||| | || | || | |||| ||||| || Sbjct 83413704 GTGCAAATTCATCGAAGTGCACAAATCCGGAG------CTGTGTGTGCATATGTGTGTGC 83413757 Query 183344 TATCAAAGTGGAAAGATGCTGCTGTGCCGTGTT---TGCAGATTGGCCAGAATCATGGTA 183400 ||| |||||| |||| ||||||||| || || |||||| ||| || || ||| | Sbjct 83413758 GCTCAGAGTGGAGAGATTCTGCTGTGCAGTATTCGCTGCAGA---GCCCGAGTCCTGGCA 83413814 Query 183401 CATGGATACTAGTGGTAGTATGAAGAAGTATTCTCCAGATGAATGGGTG 183449 |||| | || || |||||| || | | |||| ||||||||| Sbjct 83413815 TGTGGA---AGGCGGCTGTGTGAAGAGGTTTACCACAGAGGAATGGGTG 83413860 Score = 114 bits (126), Expect = 2e-20 Identities = 238/349 (68%), Gaps = 19/349 (5%) Strand=Plus/Plus Query 183106 CTTTTGCCAACACGGATGGTGGATATTTGTTCATTGGAGTTGATAATAATACACA-CAAA 183164 ||||| ||||||| || || ||||||||||||||||| | ||| || || || |||| Sbjct 83590141 CTTTTACCAACACTGAAGGGGGATATTTGTTCATTGGTTTGGATGGCAAAACCCAGCAAA 83590200 Query 183165 GTAGTTGGATTCACGGTGGGTCAAG-ACTACCTCAAACTGGTAGAGAGTGATATAGAAAA 183223 || | | || | | | | ||| || | ||| || |||||||||| |||||||| Sbjct 83590201 TTATTGGTTTTGAAGCAGAG--AAGAACGATCTCGTGCTTCTAGAGAGTGAAATAGAAAA 83590258 Query 183224 GTATATCAAAAGACTTCGTGTTGTGCATTTCTGTGAGAAGAAAGAGGACATCAAGTACGC 183283 || ||| || || | ||| || ||||||| |||||| ||| | || || ||| | Sbjct 83590259 GTGCATCCAACAGCTGCCTGTCACTCACTTCTGTGGGAAGAAGGAGAAGATAAAATACAC 83590318 Query 183284 GTGTCGATTCATCAAGGTGTATAAACCTGGGGAGGAGACTACCTCGACATACGTGTGCGC 183343 || ||||||| | ||| | ||| | || | || | |||| ||||| || Sbjct 83590319 ATGCAAATTCATCGAAGTGCACAAATCCGGAG------CTGTGTGTGCATATGTGTGTGC 83590372 Query 183344 TATCAAAGTGGAAAGATGCTGCTGTGCCGTGTT---TGCAGATTGGCCAGAATCATGGTA 183400 ||| |||||| |||| ||||||||| ||||| |||||| ||| || || ||| | Sbjct 83590373 GCTCAGAGTGGAGAGATTCTGCTGTGCAGTGTTCGCTGCAGA---GCCCGAGTCCTGGCA 83590429 Query 183401 CATGGATACTAGTGGTAGTATGAAGAAGTATTCTCCAGATGAATGGGTG 183449 | |||| | || || |||||| || | | |||| ||||||||| Sbjct 83590430 CGTGGA---AGGCGGCTGTGTGAAGAGGTTTACCACAGAGGAATGGGTG 83590475 Score = 102 bits (112), Expect = 1e-16 Identities = 234/347 (67%), Gaps = 19/347 (5%) Strand=Plus/Plus Query 183108 TTTGCCAACACGGATGGTGGATATTTGTTCATTGGAGTTGATAATAATACACA-CAAAGT 183166 ||||| ||||| || || ||||||||||||||||| | ||| || || || |||| | Sbjct 83556489 TTTGCAAACACTGAAGGGGGATATTTGTTCATTGGCTTGGATGGCAAAACGCAGCAAATT 83556548 Query 183167 AGTTGGATTCACGGTGGGTCAAGA-CTACCTCAAACTGGTAGAGAGTGATATAGAAAAGT 183225 | | | || | | | | |||| | | |||| || |||||||||| |||||||||| Sbjct 83556549 ATTGGTTTTGAAGCAGAG--AAGAGCAATCTCATGCTTCTAGAGAGTGAAATAGAAAAGT 83556606 Query 183226 ATATCAAAAGACTTCGTGTTGTGCATTTCTGTGAGAAGAAAGAGGACATCAAGTACGCGT 183285 ||| || || | ||| || ||||||| | |||| ||| | || || ||| | | Sbjct 83556607 GCATCCAACAGCTGCCTGTCACTCACTTCTGTGGGGAGAAGGAGAAGATAAAATACACAT 83556666 Query 183286 GTCGATTCATCAAGGTGTATAAACCTGGGGAGGAGACTACCTCGACATACGTGTGCGCTA 183345 | ||||||| | ||| ||| | || | || | |||| ||||| || Sbjct 83556667 GCAAATTCATCGAAGTGCGCAAATCCGGAG------CTGTGTGTGCATATGTGTGTGCGC 83556720 Query 183346 TCAAAGTGGAAAGATGCTGCTGTGCCGTGTT---TGCAGATTGGCCAGAATCATGGTACA 183402 ||| ||| || || | ||||||||| ||||| |||||| ||| || || ||| || Sbjct 83556721 TCAGAGTAGAGAGGTTCTGCTGTGCAGTGTTCGCTGCAGA---GCCTGAGTCCTGGCACG 83556777 Query 183403 TGGATACTAGTGGTAGTATGAAGAAGTATTCTCCAGATGAATGGGTG 183449 |||| |||| || |||||| || | | |||| ||||||||| Sbjct 83556778 TGGA---AGGTGGCTGTGTGAAGAGGTTTACCACAGAGGAATGGGTG 83556821 Score = 95.1 bits (104), Expect = 2e-14 Identities = 145/203 (71%), Gaps = 4/203 (2%) Strand=Plus/Plus Query 183108 TTTGCCAACACGGATGGTGGATATTTGTTCATTGGAGTTGATAATAATACACA-CAAAGT 183166 ||||| ||||| ||||| ||||||||||||||||| | ||| || || || |||| | Sbjct 83527249 TTTGCAAACACTGATGGGGGATATTTGTTCATTGGCTTGGATGGCAAAACGCAGCAAATT 83527308 Query 183167 AGTTGGATTCACGGTGGGTCAAGA-CTACCTCAAACTGGTAGAGAGTGATATAGAAAAGT 183225 | | | || | | | | |||| | | ||| || |||||||||| |||||||||| Sbjct 83527309 ATTGGTTTTGAAGCAGAG--AAGAGCGATCTCGTGCTTCTAGAGAGTGAAATAGAAAAGT 83527366 Query 183226 ATATCAAAAGACTTCGTGTTGTGCATTTCTGTGAGAAGAAAGAGGACATCAAGTACGCGT 183285 ||| || || | ||| || ||||||||| |||| ||| | ||||||||| ||| Sbjct 83527367 GCATCCAACAGCTGCCTGTCACTCACTTCTGTGAGGAGAAGGAGAAGATCAAGTACACGT 83527426 Query 183286 GTCGATTCATCAAGGTGTATAAA 183308 | ||||||| | ||| | ||| Sbjct 83527427 GCAAATTCATCGAAGTGCACAAA 83527449 >seq18 Length=130317789 Score = 116 bits (128), Expect = 5e-21 Identities = 294/446 (66%), Gaps = 6/446 (1%) Strand=Plus/Minus Query 97454 CATCATGAACGGCGGACATATTCAGTTGATAATCGGTCCCATGTTTTCAGGTAAAAGTAC 97513 || || || | | || || |||||| |||| |||| |||||||| ||||| ||||| || Sbjct 127349086 CAGCAAGACCCGGGGGCAGATTCAGGTGATTTTCGGGCCCATGTTCTCAGGGAAAAGCAC 127349027 Query 97514 AGAATTGATTAGACGAGTTAGACGTTATCAAATAGCTCAATATAAATGCGTGACTATAAA 97573 || |||| ||| |||| || || | || || || || || || ||| || || || Sbjct 127349026 GGAGCTGATGAGAAGAGTCAGGCGCTTCCAGATCGCCCAGTACAAGTGCCTGGTCATCAA 127348967 Query 97574 ATATTCTAACGATAATAGATACGGAACGGGACTATGGACGCATGATAAGAATAATTTTGC 97633 ||| | || || | | || | | | | | || |||||| ||| | | | Sbjct 127348966 GTATGCCAAAGACACGCGCTATAGCAACAGCTTCTCCACACATGATCGGAACACCATGGA 127348907 Query 97634 AGCATTGGAAGCAACTAAACTATACGATGT---CTTGGAATCAATTACAGATTTCTCCGT 97690 |||||| ||| || |||||| | ||| || | | | | |||| Sbjct 127348906 CGCATTGCCAGCCTGCCTGCTCCGCGATGTGACCCAGGAGTCCTTG---GGTGTGGCCGT 127348850 Query 97691 GATAGGTATCGATGAAGGACAGTTCTTTCCAGACATTGTTGAATTCTGTGAGCGTATGGC 97750 || || ||||||||||| ||||| ||||| |||||||| || |||||||| ||||| Sbjct 127348849 CATTGGCATCGATGAAGGGCAGTTTTTTCCTGACATTGTGGATTTCTGTGAAATGATGGC 127348790 Query 97751 AAACGAAGGAAAAATAGTTATAGTAGCCGCACTTGATGGGACATTTCAACGTAAACCGTT 97810 ||||| || || | ||| || || || ||||| |||||||| || || | || | || Sbjct 127348789 CAACGAGGGCAAGACAGTAATTGTGGCAGCACTGGATGGGACTTTCCAGAGGAAGGCTTT 127348730 Query 97811 TAATAATATCTTGAATCTTATTCCATTATCTGAAATGGTGGTAAAACTAACTGCTGTGTG 97870 | |||||||| || | || | | || | ||||| || || || |||||||| Sbjct 127348729 CGGCAGCATCTTGAACCTGGTGCCCCTGGCGGAGAGTGTGGTGAAGCTCACCGCTGTGTG 127348670 Query 97871 TATGAAATGCTTTAAGGAAGCTTCCT 97896 ||| | |||||| |||||| ||| Sbjct 127348669 CATGGAGTGCTTTCGAGAAGCTGCCT 127348644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718220280942560