Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20spretus_20[genbank_20GCA_5F001624865.1_202016-04-26] 5,404 sequences; 2,625,587,472 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq3385 264 3e-65 seq17 170 4e-37 seq8 152 1e-31 seq15 149 1e-30 seq3 149 1e-30 seq16 141 2e-28 seq12 132 1e-25 seq14 131 4e-25 seq18 129 1e-24 seq20 123 6e-23 seq6 120 7e-22 seq11 113 1e-19 seq4 84.2 5e-11 >seq3385 Length=62036 Score = 264 bits (292), Expect = 3e-65 Identities = 631/945 (67%), Gaps = 27/945 (3%) Strand=Plus/Plus Query 268700 AGATTTGTGATATTTCCAATACAGCATGGTGATATATGGAGGATGTACAAACAGGCCGTT 268759 || ||||| || |||||||| ||| || |||||| ||||| ||||| || || || Sbjct 20082 AGGTTTGTCATCTTTCCAATCCAGTATCCTGATATCTGGAGAATGTATAAGCAAGCACGG 20141 Query 268760 GCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACTTAATAGATTGGAAAAAT 268819 || ||||| ||||| | |||||| || || |||| | ||| | | ||||| || Sbjct 20142 GCATCTTTCTGGACAGAAGAAGAGGTTGACTTGTCAAAGGACCTCCCTCACTGGAACAAG 20201 Query 268820 TTAAAACCAGAAGA-AAGAAGATTTATATCTTATATTCTTGCGTTTTTTGCAGTTAGTGA 268878 | ||| | || || ||| | ||||| || | || | || |||||||||| ||||| Sbjct 20202 CTTAAATCCGACGAGAAGTAC-TTTATCTCCCACATCTTAGCCTTTTTTGCAGCCAGTGA 20260 Query 268879 TGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGATTCCTGAAGC 268938 ||| || || || ||||| | || ||| || |||| ||||| ||| |||| || | Sbjct 20261 TGGAATTGTAAATGAAAACTTGGTGGAGCGTTTTAGTCAGGAGGTGCAGGTTCCGGAGAC 20320 Query 268939 CAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGATGTACAGTCT 268998 || || || || || ||||| || || ||| |||| ||||||||||||||| | Sbjct 20321 TCACTGCTTCTATGGCTTTCAGATTCTCATCGAGAATGTTCACTCAGAGATGTACAGTTT 20380 Query 268999 ATTAATAGATACTTATAT-AGATGATAACAACGAAAA-GAAAAGACTATTTTCTTCTATG 269056 | ||||||| ||||| || ||| ||| ||| ||||| | || ||||| | || Sbjct 20381 ACTAATAGACACTTACATCAGA-GAT-CCAAAGAAAAGGGAATTTTTATTTAACGCAATT 20438 Query 269057 AGAACTATGGACTGTGTGAGaaaaaaaTCTGAATGGGCTCTGAAATGGATAAACGATAG- 269115 ||| ||| | ||| | |||||| | || ||||||||| |||||| ||||| Sbjct 20439 GAAACAATGCCATATGTTAAGAAAAAAGCGGACTGGGCTCTGCGCTGGATAGCAGATAGG 20498 Query 269116 --CGCGCCTTACGGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCG 269173 | ||| || ||||| | || || ||||| ||||| ||||| || | ||| || Sbjct 20499 AAATCTACTTTTGGGGAAAGAGTGGTGGCCTTTGCTGCTGTGGAAGGAATTTCCTTCTCT 20558 Query 269174 GGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTC 269233 || || ||||| || || || ||| | ||||| |||||||| ||||| | | | ||||| Sbjct 20559 GGATCATTTGCTGCAATATTCTGGCTAAAGAAGAGAGGCCTCATGCCTGAACTGACTTTT 20618 Query 269234 TCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTGTTTATTATTT 269293 || || ||| |||| |||||||| |||||| | ||||| ||||| || || Sbjct 20619 TCAAATGAACTGATCAGCAGGGATGAAGGTCTTCACTGTGACTTTGCCTG---------- 20668 Query 269294 ACTAATTATCTTTCA-CACAAACCTTCTCAAGATAGAGTATACGAAATTATAGATTCAGC 269352 | || ||||| |||| ||||| |||| ||||| ||||| || | | || Sbjct 20669 ---CCTGATGTTTCAGTACAAGCCTTCAGAAGACAGAGTGAGGGAAATCATTGCTGATGC 20725 Query 269353 TGTTTCTGTAGAAACAGAATTTCTAACGGAAGCTCTATCTATCGATCTTATCGGTATGAA 269412 |||| | || || ||| |||| ||||| | || | | || || || || || Sbjct 20726 TGTTCAAATTGAGCAGGAGTTTTTAACAGAAGCCTTGCCTGTTGGCCTCATTGGAATTAA 20785 Query 269413 TAGCAAATCGATGATAGAATATATTAAGTTCGTATCTGATAGATTGCTGGTGTCTTTAGG 269472 | || || | | || ||| |||| ||| |||| ||||| || | | || Sbjct 20786 CTATGTTTTGACGAAACAGTACATTGAGTTTGTAGCTGACAGATTACTTATAGAACTTGG 20845 Query 269473 GTTTAGTAAAAAATATAACGTTGAAAATCCGTTTAGTTTTATGGAGAATATATCATTAGA 269532 || || | | | | | |||||||| ||| |||||||||||| || |||||||| Sbjct 20846 ATTCTCAAAGATTTTTCAGGCAGAAAATCCCTTTGATTTTATGGAGAACATTTCATTAGA 20905 Query 269533 AGGTAAGGCTAATTTCTTCGAGAAGCGGGTAAGTAACTATCAGAAAATGGGTGTAATGTC 269592 ||| || | |||||||| ||||| || || | | ||||||| | | | || ||| | Sbjct 20906 AGGGAAAACAAATTTCTTTGAGAAACGAGTTTCTGAGTATCAGAGATTTGCAGTCATGGC 20965 Query 269593 TACTAAAGAA--GAAAATATTTTCACTACAGATGCAGAATTCTAA 269635 ||| | || ||| | ||||| |||||||| |||||| Sbjct 20966 --GGAAACCACCGATAATGTCTTCACCTTGGATGCAGATTTCTAA 21008 >seq17 Length=136257712 Score = 170 bits (188), Expect = 4e-37 Identities = 163/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 || ||||| | ||||| || || ||||| || |||||||| | ||| | || ||||| Sbjct 39746518 ACCAGATGAAGGGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTCCGGCCATCTTCC 39746459 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 || || || |||||||| || |||||||| ||||||||||| |||||||| |||||||| Sbjct 39746458 AGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCTGG 39746399 Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530 ||||| || ||||||||||||| || || ||||| |||||||| || || || || Sbjct 39746398 ATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCTAGCGTGATGGTTTTC 39746339 Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| || || ||| | |||||||| Sbjct 39746338 CCCGTAAGGGTCTTCACAGAGATCTGCAT 39746310 >seq8 Length=97876770 Score = 152 bits (168), Expect = 1e-31 Identities = 160/209 (77%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 || ||||| | || || || || ||||| || |||||| | | ||| || ||||| Sbjct 13844519 ACAAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAAACA-AGTATGGCCATCTTCC 13844461 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 || || || |||||||| | |||||||| ||||||||||| |||||||| |||||||| Sbjct 13844460 AGCTGCTTACCAGCAAAGACCAGCCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCTGG 13844401 Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530 ||||| || ||||||||||||| ||| || ||||| ||||| || || || ||||| Sbjct 13844400 ATCTTGGCCTTTACATTTTCTATGGTGTCCAGGGGTTCAACCTCGAGCGTGATGGTCTTC 13844341 Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || |||| || || ||||| |||||||| Sbjct 13844340 CCCATAAGGGTCTTCACAAAAATCTGCAT 13844312 Score = 111 bits (122), Expect = 4e-19 Identities = 143/195 (73%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || || ||||| || |||||| | | ||| || ||||| || || || ||| Sbjct 13420511 GTGGACTCCTTTTGAATGTTGTAGTCAAACA-AGTATGGCCATCTTCCAGCTGCTTACCA 13420453 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| | |||||||| ||||||||||| | |||||| |||||||| ||||| | ||| Sbjct 13420452 GCAAAGACCAGCCTCTGCTGATCAGGAGGAAGTCCTTCCTTATCCTGGATCTTGGACTTT 13420393 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 |||||||||| ||| || ||||| ||||| || | | |||| |||| || || Sbjct 13420392 ACATTTTCTATGGTGTCCAGGGGTTCAACCTCGAGCATGGTGTTCTTCCCAG-AATGGTC 13420334 Query 104543 TTTACAAATATCTGC 104557 || | ||| ||||| Sbjct 13420333 TTCATAAAACTCTGC 13420319 >seq15 Length=152823684 Score = 149 bits (164), Expect = 1e-30 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| || | ||| || || || | || || |||||||| || || || || Sbjct 125084942 ATCCCACCTCTGAGGCGAAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAATCT 125085001 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || || | || ||||| || || || || ||||| || |||||||| || ||||| Sbjct 125085002 GACAGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGG 125085061 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || || || || ||||| |||||||| || ||||| || | ||| || || || || Sbjct 125085062 GGGATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTCTCAATGGTGTCACTGGGCTCG 125085121 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || || || ||||||||||| | ||||| ||||| |||||||| Sbjct 125085122 ACCTCCAGGGTGATGGTCTTACCAGTTAAGGTTTTCACAAAGATCTGCAT 125085171 >seq3 Length=125065471 Score = 149 bits (164), Expect = 1e-30 Identities = 151/197 (77%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || |||||||| || || || ||||| ||||| | || |||||||| || || || Sbjct 62144871 GTCGACTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCTAGCTGCTTGCCG 62144812 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || |||||||| || ||||| || || || ||||||||||| ||||| || || Sbjct 62144811 GCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGGATCTTGGCCTTC 62144752 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | ||| || || || || ||||| || || || ||||| ||||| || || Sbjct 62144751 ACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTC 62144692 Query 104543 TTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 62144691 TTCACGAAGATCTGCAT 62144675 Score = 143 bits (158), Expect = 6e-29 Identities = 172/234 (74%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || || || | || || || || | || || |||||||| || || || ||| Sbjct 62144676 ATGCCACCCCTCAGACGGAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCA 62144617 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || || | || |||||||| || || || ||||| || |||||||| || ||||| Sbjct 62144616 GAGAGGGTGCGGCCATCTTCTAGCTGCTTGCCCGCAAAGATCAGCCTCTGCTGGTCAGGG 62144557 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || || ||||||||||| ||||| || || || || || | ||| || || || || Sbjct 62144556 GGGATGCCCTCTTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCC 62144497 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563 ||||| || || || ||||| || || || || || || || |||||||||||| Sbjct 62144496 ACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATTTTG 62144443 >seq16 Length=150978388 Score = 141 bits (156), Expect = 2e-28 Identities = 143/186 (77%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 104378 ATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTC 104437 || || || ||||| ||||| | || |||||||| || || |||||||| || |||||| Sbjct 58879370 ATGTTGTAATCAGAGAGAGTGCGGCCATCTTCTAGCTGCTTGCCAGCAAAGATCAGCCTC 58879429 Query 104438 TGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTA 104497 || || | ||| || || || ||||||||||| ||||| || || || || |||| ||| Sbjct 58879430 TGCTGGTAAGGGGGAATGCCCTCTTTATCCTGGATCTTGGCCTTCACGTTCTCTATGGTG 58879489 Query 104498 TCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGC 104557 || || || || |||||||| || || ||||| || || || || || | ||| |||||| Sbjct 58879490 TCACTGGGCTCCACCTCTAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAGAAAGATCTGC 58879549 Query 104558 ATTTTG 104563 |||||| Sbjct 58879550 ATTTTG 58879555 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 5/209 (2%) Strand=Plus/Plus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 || ||||| | || || || || ||||| || |||||||| | ||| | || ||||| Sbjct 3200044 ACCAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTCCGTCCATCTTCC 3200103 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 || || || |||||||| | |||||||| ||||||||||| | || |||||||| Sbjct 3200104 AGCTGCTTACCAGCAAAGACCAGCCTCTGCTGATCAGGAGGAAGTC-----TTATCCTGG 3200158 Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530 ||||| || ||||||||||||| | || ||||| |||| ||||| || || || Sbjct 3200159 ATCTTGGCCTTTACATTTTCTATAGAGTCTGAGGGTTCAACCTGGAGTGTGATGGTTTTC 3200218 Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| || || ||||| |||||||| Sbjct 3200219 CCCGTAAGGGTCTTCACAAAAATCTGCAT 3200247 >seq12 Length=182815943 Score = 132 bits (146), Expect = 1e-25 Identities = 155/209 (74%), Gaps = 4/209 (2%) Strand=Plus/Plus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 || ||||| | || || || || ||||| || |||||| | || | || |||| Sbjct 146741575 ACCAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAAA----GTCCGGCCATCTTTC 146741630 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 | | || |||||||| || |||||||| ||||||||||| |||||||| |||||||| Sbjct 146741631 GGAGGCTTACCAGCAAAGATCAGCCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCTGG 146741690 Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530 |||| | ||||||||||||| || || | ||||| ||||| || || || || || Sbjct 146741691 GTCTTGACCTTTACATTTTCTATAGTGTCCCAGGGTTCAACCTCCAGCGTGATGGTTTTC 146741750 Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| || || ||||| |||||||| Sbjct 146741751 CCCGTAAGGGTCTTCACAAAAATCTGCAT 146741779 Score = 104 bits (114), Expect = 5e-17 Identities = 141/195 (72%), Gaps = 5/195 (3%) Strand=Plus/Minus Query 104373 TCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTA 104432 |||| || || || ||||| || || | || |||||||| || ||||| ||||| || | Sbjct 121887489 TCTGGATGTTGTAATCAGAGAGGGTGCAGCCATCTTCTAGCTGCTTTCCTGCAAAGATGA 121887430 Query 104433 GCCTCTGTTGATCAGGAGGTATTCC----TTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 |||| || || ||||| || || || |||||||||||| ||| |||| || || || Sbjct 121887429 GCCTTTGCTGGTCAGGGGGAATGCCCTCTTTCTTTATCCTGGATC-TTGCCTTCACGTTC 121887371 Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548 || | ||| || || || || || ||||| || || ||||| || || || || | Sbjct 121887370 TCGATGGTGTCACTGGGCTCCACATCTAGGGTGATGGTCTTGTTGGTCAGGGTCTTCTCG 121887311 Query 104549 AATATCTGCATTTTG 104563 || || ||||||||| Sbjct 121887310 AAGATTTGCATTTTG 121887296 Score = 95.1 bits (104), Expect = 3e-14 Identities = 99/130 (76%), Gaps = 4/130 (3%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 ||||| || || ||||| || |||||| | || || ||||| || || || ||| Sbjct 92361953 GTAGACTCCTTTTGAATGTTGTAGTCAAA----GTATGGCCATCTTCCAGCTGCTTGCCA 92361898 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||| | || | |||||| ||||||||||| ||||||| |||| ||| ||||| || ||| Sbjct 92361897 GCACAGATCAACCTCTGCTGATCAGGAGGAATTCCTTTCTTATTCTGGATCTTGGCCTTT 92361838 Query 104483 ACATTTTCTA 104492 |||||||||| Sbjct 92361837 ACATTTTCTA 92361828 >seq14 Length=152946536 Score = 131 bits (144), Expect = 4e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || ||||| | ||||| || |||||||| | ||| | || ||||| || | || ||| Sbjct 131977015 GTGGATTCCCTTTGAATGTTGTAGTCAGACAAAGTCCGGCCATCTTCCAGCGGCTTACCA 131977074 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| | | |||||| ||||||||||| | |||||| |||||||| |||| || ||| Sbjct 131977075 GCAAAGGTCAACCTCTGCTGATCAGGAGGAAGTCCTTCCTTATCCTGGGTCTTGGCCTTT 131977134 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 |||||| ||| || || ||||| ||||| || || || | ||| || |||| || Sbjct 131977135 ACATTTACTATAGTGTCCGAGGGTTCAACCTCGAGCGTGATGGCCTTCCCCATAAGGGTC 131977194 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 131977195 TTCACAAAAATCTGCAT 131977211 Score = 127 bits (140), Expect = 5e-24 Identities = 143/190 (75%), Gaps = 1/190 (1%) Strand=Plus/Plus Query 104375 TGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGC 104434 ||||| || |||||||| | ||| | || ||||| || || || |||||||| | | | Sbjct 128583654 TGAATGTTGTAGTCAGACAAAGTCCGGCCATCTTCCAGCTGCTTACCAGCAAAGGTCAAC 128583713 Query 104435 CTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACG 104494 ||||| ||||||||||| | | |||| |||||||| |||| || ||||||||||||| Sbjct 128583714 CTCTGCTGATCAGGAGGAAGTTCTTCCTTATCCTGGGTCTTGGCCTTTACATTTTCTATA 128583773 Query 104495 GTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTT-ACCAGTAAGTGTTTTTACAAATAT 104553 || || ||||| ||||| || || || || || || |||| || || ||||| || Sbjct 128583774 GTGTCCGAGGGTTCAACCTCGAGCGTGATGGTTTTCCCCCATAAGGGTCTTCACAAAGAT 128583833 Query 104554 CTGCATTTTG 104563 ||||||| || Sbjct 128583834 CTGCATTGTG 128583843 >seq18 Length=130317789 Score = 129 bits (142), Expect = 1e-24 Identities = 127/164 (77%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || || ||||| || |||||||| | ||| | || ||||| || || || ||| Sbjct 111279689 GTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTCCGGCCATCTTCCAGCTGCTTACCA 111279748 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| | |||||||| ||||||||||| |||||||| |||||||| ||||| || ||| Sbjct 111279749 GCAAAGACCAGCCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTT 111279808 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 |||||||||| || || ||||| ||||| || || || || Sbjct 111279809 ACATTTTCTATAGTGTCCGAGGGTTCAACCTCAAGCGTGATGGT 111279852 Score = 105 bits (116), Expect = 2e-17 Identities = 111/146 (76%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 104414 TGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATC 104473 || || |||||||| || || |||| ||||||||||| ||||||| |||||| || ||| Sbjct 51697737 TGCTTACCAGCAAAGATCAGGTTCTGCTGATCAGGAGGAATTCCTTTTTTATCATGGATC 51697796 Query 104474 TTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCA 104533 || || ||||||||||||| || || | |||| ||||| || | || ||||| || Sbjct 51697797 TTGGCCTTTACATTTTCTATAGTGTCCAAAAGTTCAACCTCAAGCATGATGGTCTTCCCT 51697856 Query 104534 GTAAGTGTTTTTACAAATATCTGCAT 104559 ||| || || ||||| ||||||| Sbjct 51697857 ATAATGGTCTTCACAAAAGTCTGCAT 51697882 >seq20 Length=148322235 Score = 123 bits (136), Expect = 6e-23 Identities = 162/223 (73%), Gaps = 1/223 (0%) Strand=Plus/Plus Query 104341 TAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCT 104400 ||||| || || || || | || | |||||||| || || || ||||| | || | Sbjct 135500336 TAGCCAGAGGACCAGGTGCAGGGTCAACTCTTTCTGGATGTTGTAATCAGAGAAGGTGCG 135500395 Query 104401 ACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTC 104460 || ||||| ||||| || || ||||| || |||||||| || || || | || || || Sbjct 135500396 GCCATCTTCCAGTTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGTG-ATGCCCTC 135500454 Query 104461 TTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGT 104520 ||||||||| ||||| || || ||||| || | ||| || || || || | |||||| || Sbjct 135500455 TTTATCCTGGATCTTGGCCTTCACATTCTCGATGGTTTCACTGGGCTCCATCTCTAGGGT 135500514 Query 104521 AATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563 || ||||| ||||| || || || | || || ||||||||| Sbjct 135500515 GATGGTCTTGCCAGTCAGGGTCTTCTCGAAGATTTGCATTTTG 135500557 Score = 109 bits (120), Expect = 1e-18 Identities = 146/202 (72%), Gaps = 1/202 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || |||||||| || || || |||| ||||| || ||||||| || | | Sbjct 62281913 GTTGACTCTTTCTGGATGTTGTAATCAGGGAGAGTATGGCCACCTTCTAGCTGCTCGTTA 62281854 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGT-ATTCCTTCTTTATCCTGAATCTTTGCTTT 104481 ||||| || |||||||| || ||||| || || || ||||||||||| ||||| || || Sbjct 62281853 GCAAAGATCAGCCTCTGCTGGTCAGGGGGGGATGCCCTCTTTATCCTGGATCTTGGCCTT 62281794 Query 104482 TACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| | | || || || || || |||||||| || || ||||||| | | || Sbjct 62281793 CACATTCTTGATAGTGTCACTGGGCTCCACCTCTAGGGTGATGGTCTTACTGTTCATGGT 62281734 Query 104542 TTTTACAAATATCTGCATTTTG 104563 || || || |||||||||||| Sbjct 62281733 CTTCACGAAGATCTGCATTTTG 62281712 >seq6 Length=117542938 Score = 120 bits (132), Expect = 7e-22 Identities = 161/227 (71%), Gaps = 14/227 (6%) Strand=Plus/Plus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || |||| || || | || ||||| | || || || || ||||| || |||||||| Sbjct 35538740 CCACCTCGAAGTCTCAACACCAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGAC 35538799 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 | ||| | || ||||| || || || |||||||| || |||||||| ||||||||||| Sbjct 35538800 AAAGTACGGCCATCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCAGGAGGA 35538859 Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512 | | |||| |||||||| |||| || ||||||||||||| || || Sbjct 35538860 AGTTCTTCCTTATCCTGGGTCTTGGCCTTTACATTTTCTATAGTGTC------------- 35538906 Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 | || || || || || || ||||| || || ||||| |||||||| Sbjct 35538907 -CGAGGGTGATGGTTTTCCCTGTAAGGGTCTTCACAAAAATCTGCAT 35538952 >seq11 Length=59623150 Score = 113 bits (124), Expect = 1e-19 Identities = 148/204 (73%), Gaps = 1/204 (0%) Strand=Plus/Minus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 || ||||| | ||||| || || ||||| || |||||||| | ||| | || ||||| Sbjct 13412269 ACCAGATGAAGGGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTCCGGCCATCTTCC 13412210 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 || | || |||||||| | |||||||| |||| |||| | |||||||| || ||||| Sbjct 13412209 AGCTCTTA-CCAGCAAAGACCAGCCTCTGCTGATGAGGAAGAATTCCTTCCTTGTCCTGG 13412151 Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530 |||| | ||||||||||||| || || ||||| ||||| || || || || || Sbjct 13412150 GTCTTGACCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGCGTGATGGTTTTC 13412091 Query 104531 CCAGTAAGTGTTTTTACAAATATC 104554 || | || || || |||| ||| Sbjct 13412090 CCCATTAGGGTCTTCTCAAAAATC 13412067 Score = 113 bits (124), Expect = 1e-19 Identities = 148/204 (73%), Gaps = 1/204 (0%) Strand=Plus/Minus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 || ||||| | ||||| || || ||||| || |||||||| | ||| | || ||||| Sbjct 13413220 ACCAGATGAAGGGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTCCGGCCATCTTCC 13413161 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 || | || |||||||| | |||||||| |||| |||| | |||||||| || ||||| Sbjct 13413160 AGCTCTTA-CCAGCAAAGACCAGCCTCTGCTGATGAGGAAGAATTCCTTCCTTGTCCTGG 13413102 Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530 |||| | ||||||||||||| || || ||||| ||||| || || || || || Sbjct 13413101 GTCTTGACCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGCGTGATGGTTTTC 13413042 Query 104531 CCAGTAAGTGTTTTTACAAATATC 104554 || | || || || |||| ||| Sbjct 13413041 CCCATTAGGGTCTTCTCAAAAATC 13413018 >seq4 Length=114123490 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 269492 GTTGAAAATCCGTTTAGTTTTATGGAGAATATATCATTAGAAGGTAAGGCTAATTTCTTC 269551 || |||||||||||| || ||||| ||||| ||| ||||||| ||| | || ||||| Sbjct 16584193 GTAGAAAATCCGTTTGACTTCATGGAAAATATCTCACTAGAAGGAAAGACAAACTTCTTT 16584252 Query 269552 GAGAAGCGGGTAAGTAACTATCAGAAAATGGGTGTAATGTC 269592 |||||||| ||| | | ||||||| ||||| || ||||| Sbjct 16584253 GAGAAGCGAGTAGGCGAGTATCAGAGGATGGGAGTCATGTC 16584293 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 269492 GTTGAAAATCCGTTTAGTTTTATGGAGAATATATCATTAGAAGGTAAGGCTAATTTCTTC 269551 || |||||||||||| || ||||| ||||| ||| ||||||| ||| | || ||||| Sbjct 16585006 GTAGAAAATCCGTTTGACTTCATGGAAAATATCTCACTAGAAGGAAAGACAAACTTCTTT 16585065 Query 269552 GAGAAGCGGGTAAGTAACTATCAGAAAATGGGTGTAATGTC 269592 |||||||| ||| | | ||||||| ||||| || ||||| Sbjct 16585066 GAGAAGCGAGTAGGCGAGTATCAGAGGATGGGAGTCATGTC 16585106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151318678614032