Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20spretus_20[genbank_20GCA_5F001624865.1_202016-04-26] 5,404 sequences; 2,625,587,472 total letters Query= NC_009334.1 Length=172764 Score E Sequences producing significant alignments: (Bits) Value seq1 109 6e-19 >seq1 Length=198846266 Score = 109 bits (120), Expect = 6e-19 Identities = 113/148 (76%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 9861 AGGGCTACCTTGGATGCCAGGCCCTGTCAGAAATGATCCAATTCTACCTGGAGGAAGTCA 9920 |||| ||| | || ||||| ||| | |||||||||||||| || ||||||| ||||| | Sbjct 131965095 AGGGTTACTTGGGTTGCCAAGCCTTATCAGAAATGATCCAGTTTTACCTGGTAGAAGTGA 131965154 Query 9921 TGCCACAGGCTGAAAACCAGGACCCTGAAGCCAAAGACCATGTAAATTCTTTGGGTGAAA 9980 |||| ||||| || || || | ||| ||| ||| || ||| | ||||| ||||||| | Sbjct 131965155 TGCCCCAGGCAGAGAAGCATGGCCCAGAAATCAAGGAGCATTTGAATTCCCTGGGTGAGA 131965214 Query 9981 ATCTAAAGACCCTACGGCTCCGCCTGCG 10008 | || |||||||| || | || ||||| Sbjct 131965215 AGCTGAAGACCCTCAGGATGCGGCTGCG 131965242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552679463980160