Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20spretus_20[genbank_20GCA_5F001624865.1_202016-04-26] 5,404 sequences; 2,625,587,472 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq1 190 8e-43 seq6 185 3e-41 seq20 113 2e-19 seq18 96.9 1e-14 seq17 93.3 2e-13 seq12 91.5 6e-13 seq3 91.5 6e-13 seq7 86.0 2e-11 >seq1 Length=198846266 Score = 190 bits (210), Expect = 8e-43 Identities = 467/698 (67%), Gaps = 19/698 (3%) Strand=Plus/Plus Query 450914 GCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAAT 450973 ||| |||| ||||||||||| ||||||| || ||||| ||||| | ||| ||||||| Sbjct 46278573 GCAGTTGGCATTGATCTTGGCACCACCTACTCCTGTGTGGGTGTCTTCCAGCATGGAAAG 46278632 Query 450974 GTAGAAATTATAGCAAATGACCAAGGATCACGAACTAC-TCCTTCATGGGTAAGTTTTAC 451032 || |||||||| || |||||||| || || || || | || | | ||| || Sbjct 46278633 GTGGAAATTATTGCCAATGACCAGGGTAACCGCACCACGTGAGCCACG--TTGCTTTCAC 46278690 Query 451033 GGATTCAGAAAGACTTTTAGGGCAAGCTGCTAA--ATCAATGGTA--AATTCAAATGCCA 451088 || |||| || | | ||| | || || || |||| ||| ||| ||| ||| Sbjct 46278691 AGACACAGAGCGATTAATTGGGGATGCGGCCAAGAATCA--GGTTGCAATG--AATCCCA 46278746 Query 451089 AAAACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTAC 451148 |||||||| | | |||| ||| |||| || || | || || |||||||| | ||| | Sbjct 46278747 CCAACACAGTTTTTTATGCCAAATGTTTGATCGGGCATAGGTTTGATGATGCTGTTGTTC 46278806 Query 451149 AAAAAGAGAAAAAATTCTTTTCTTATGATG-TAGTAAATCAAAAAGGAAAGCCCTATATT 451207 | || | || || | | | ||| | || ||| | ||| | |||| | || Sbjct 46278807 AGTCTGATATGAAGCACTGGCCCT-TCATGGTGGTGAATGATGCAGGCAGGCCCAAGGTT 46278865 Query 451208 CAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTT 451267 ||||| | || ||||| || || |||| ||| || || ||| | || ||||||||| Sbjct 46278866 CAAGTGGAATACAAAGGGGAGACAAAAAGTTTCTACCCAGAGGAAGTGTCCTCTATGGTT 46278925 Query 451268 CTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTA 451327 || || || ||||| |||| |||||| || | | | ||||| |||| || Sbjct 46278926 CTGACAAAGATGAAGGAAATTGCAGAAGCGTACCTCAGAAAGACTGTTACCAATGCTGTG 46278985 Query 451328 ATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACAT 451387 | || || || ||||| |||||||| | || || || ||||| |||||||| ||| | Sbjct 46278986 GTCACAGTGCCTGCTTACTTCAATGACTCTCAGCGACAGGCAACAAAAGATGCTGGAACT 46279045 Query 451388 ATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATAT 451447 |||||||| | ||||| |||||||| || |||||||| || || |||||| | || ||| Sbjct 46279046 ATTGCTGGCCTCAATGTACTTCGAATCATCAATGAACCAACTGCTGCTGCTATTGCTTAT 46279105 Query 451448 GGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGA 451507 || ||| || || | || |||| || | | | ||||| || || || Sbjct 46279106 GGCTTAG----AT--AAGGTCGGAGGTGAAAGGAACGTGCTCATTTTTGACTTGGGAGGT 46279159 Query 451508 GGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACC 451567 || ||| |||| || | || | ||||| ||||| | |||||||| || |||| Sbjct 46279160 GGCACTTTTGATGTGTCAATCCTCACTATTGAGGATGGAATTTTTGAAGTCAAATCAACA 46279219 Query 451568 AATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 ||| || || || | || || |||||| |||| || Sbjct 46279220 GCTGGAGACACCCACTTGGGTGGAGAAGATTTTGACAA 46279257 Score = 91.5 bits (100), Expect = 6e-13 Identities = 171/249 (69%), Gaps = 12/249 (5%) Strand=Plus/Minus Query 451892 ATTGATGAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTTG 451951 ||| |||| | ||| | || || |||||||| |||| | || |||||| | | || Sbjct 7852506 ATTCATGATACTGTCTTGGTGGGTGGTTCTACCAGAATCTCCAAGATTCAAAAACTTCTG 7852447 Query 451952 T----CTTCTTATTTTGGAGGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGT 452007 |||||| | |||||| |||| ||||| | | || |||||||||||||| Sbjct 7852446 CAAGACTTCTTCAAT----GGAAAAGAACTGAATAAGAACATTAACCCTGATGAAGCTGT 7852391 Query 452008 TGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAG--GTTCAGATGATGAAAAATTA 452065 ||| ||| |||| || || || |||||| ||||| | | || || | ||| | | | Sbjct 7852390 TGCCTATAGTGCAGCTGTGCAGGCAGCTGTTCTATCTGGAGTCAAGTCTACGAATATTCA 7852331 Query 452066 GGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGA 452125 | ||| | ||| | | ||||| | ||||| || ||||| ||||||| ||| ||||| Sbjct 7852330 G--GATTTGCTGCTCTTGGATGTCAGTCCTCTTTCCCTTGGTATTGAAACTGCTAGTGGA 7852273 Query 452126 ATGATGACT 452134 | |||||| Sbjct 7852272 GTCATGACT 7852264 Score = 89.7 bits (98), Expect = 2e-12 Identities = 70/84 (83%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 450913 AGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAA 450972 |||| |||| ||||||||||| ||||||| ||| ||||| ||||| | ||| ||||||| Sbjct 109838793 AGCAGTTGGCATTGATCTTGGCACCACCTATTCCTGTGTGGGTGTCTCCCAGCATGGAAA 109838852 Query 450973 TGTAGAAATTATAGCAAATGACCA 450996 || |||||||| || |||||||| Sbjct 109838853 GGTGGAAATTATTGCCAATGACCA 109838876 >seq6 Length=117542938 Score = 185 bits (204), Expect = 3e-41 Identities = 463/696 (67%), Gaps = 13/696 (2%) Strand=Plus/Minus Query 450914 GCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAAT 450973 ||| |||| ||||||||||| ||||||| || ||||| ||||| | ||| ||||||| Sbjct 83739095 GCAGTTGGCATTGATCTTGGCACCACCTACTCCTGTGTGGGTGTCTTCCATCATGGAAAG 83739036 Query 450974 GTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTACG 451033 || |||||||| || |||||||| || || || || | | || ||| || Sbjct 83739035 GTGGAAATTATTGCCAATGACCAGGGTAACCGCACCACGACGAGCTACGTTGCTTTCACC 83738976 Query 451034 GATTCAGAAAGACTTTTAGGGCAAGCTGCTA--AATCA-ATGGTAAATTCAAATGCCAAA 451090 || |||| ||| | | ||| | || || | ||||| | ||||| || ||| Sbjct 83738975 GACACAGAGAGATTAATTGGGAATGCGGCCAAGAATCAGGTTGTAAA---GAAGCCCACC 83738919 Query 451091 AACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAA 451150 |||||||| | |||||| |||||| || | |||| || |||||||| | ||| || Sbjct 83738918 AACACAGTTTTTGATGCCAAACGTCAGATCAGGCGTAGGTTTGATGATGCTGTTGTTCAG 83738859 Query 451151 AAAGAGAAAAAATTCTTTTCTTATGAT-GTAGTAAATCAAAAAGGAAAGCCCTATATTCA 451209 || | || || | | | || || || ||| | ||| | |||| | | || Sbjct 83738858 TCTGATATGAAGCACTGGCCCT-TCATGGTGGTGAATGATGCAGGCAGGCCCAAGGTCCA 83738800 Query 451210 AGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCT 451269 ||| | || ||||| || || | || ||| || || ||| | || || |||||||| Sbjct 83738799 AGTGGAATACAAAGGGGAGACAACAAGTTTCTACCCAGAGGAAGTGTCCTCCATGGTTCT 83738740 Query 451270 TACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAAT 451329 || || ||||| |||| |||||| || | || | |||| |||| || | Sbjct 83738739 GACAAAGATGAAGGAAATTGCAGAAGCGTACCTCGGAAAGACTGTTATCAATGCTGTGGT 83738680 Query 451330 TACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATAT 451389 || || | ||||| |||||||| | || || || ||||| |||||||| ||| ||| Sbjct 83738679 CACAGTGTCGGCTTACTTCAATGA--CTCAGCGACAGGCAACAAAAGATGCTGGAACTAT 83738622 Query 451390 TGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGG 451449 |||||| | ||||| |||||||| || |||||||| || || |||||| | || |||| Sbjct 83738621 TGCTGGCCTCAATGTACTTCGAATCATCAATGAACCAACTGCTGCTGCTATTGCTAATGG 83738562 Query 451450 ACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGG 451509 ||| || || | || |||| ||| | | | ||||| || || || || Sbjct 83738561 CTTAGATAA---GAAGGTTGGAGCTGAAAGGAATGTGCTCATTTTTGACTTGGGAGGTGG 83738505 Query 451510 AACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAA 451569 ||| |||| || | || | ||||| ||||| | |||||||| || |||| Sbjct 83738504 CACTTTTGATGTGTCAATCCTGACTATTGAGGATGGAATTTTTGAAGTCAAATCAACAGC 83738445 Query 451570 TGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 ||| || || || |||| || |||||| |||| || Sbjct 83738444 TGGAGACACCCACTTAGGTGGAGAAGATTTTGACAA 83738409 Score = 105 bits (116), Expect = 3e-17 Identities = 391/604 (65%), Gaps = 18/604 (3%) Strand=Plus/Minus Query 451896 ATGAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCA-AGATATGTT---G 451951 |||| ||||| | || || |||||||| |||| || || ||||| | || | | | Sbjct 83736071 ATGATATTGTCTTGGTGGGTGGTTCTACCAGAATCCCCAAGATTCAGAAATTTCTGCAAG 83736012 Query 451952 TCTTCTTATTTTGGAGGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCA 452011 |||||| | |||||| | || |||||| | || || |||||||||||||| Sbjct 83736011 ACTTCTTCAAT----GGAAAAGAGCTGAACAAGAGCATTAACCCCGATGAAGCTGTTGCC 83735956 Query 452012 TATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCAGATGA---TGAAAAATTAGGA 452068 |||||||| || || || ||||| |||||| | || ||| | ||| || | Sbjct 83735955 TATGGTGCAGCTGTCCAGGCAGCCATTCTATCTGG---AGACAAGTCTGAGAATGTTCAG 83735899 Query 452069 GATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATG 452128 ||| | ||| | | ||||| || ||||| || ||||| ||||||| ||||| || | Sbjct 83735898 GATTTGCTGCTCTTGGATGTCACTCCTCTTTCCCTTGGTATTGAAACTGCTGGCGGGGTC 83735839 Query 452129 ATGACTAATTTAATTAAACGAGGAACTTCTATTCCTTGTAAAAAGAGTCAAACATTTAGT 452188 |||||| | || || | || | || ||| || ||| || || || | Sbjct 83735838 ATGACTGTCCTCATCAAGTGCAATACCACCATCCCTACCAAGCAGACACAGACTTTCACC 83735779 Query 452189 ACAGCAAGTGATAACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCAATG 452248 || ||| ||||| || |||||| ||||| |||| |||||| ||| | || | | Sbjct 83735778 ACCTACTCTGACAACCAGCCTGGTGTACTCATTCAGGTGTATGAAGGTGAAAGGGCCACG 83735719 Query 452249 ACACGAGATAATAATAAACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCAAGG 452308 || || || || || ||| | || || | ||| ||||| || | Sbjct 83735718 ACCAAGGACAACAACCTGCTTGGAAAGTTCGAGCTCACGGGCATCCCTCCAGCACCCCGT 83735659 Query 452309 GGAACTCCTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAGT 452368 || |||||| ||||| |||| | ||| | ||||| ||||| || || ||||| | Sbjct 83735658 GGGGTTCCTCAGATTGAGGTTACTTTTGACATCGATGCCAATGGCATCCTCAATGTTTCT 83735599 Query 452369 GCAGTTG-AAAAATCATCTGGAAAATCAGAA-AAAATTACAATTACTAATGATAAAAACC 452426 || || | || | || | || ||| |||| || || || || || ||||| | || Sbjct 83735598 GCTGTAGTTAAGAGCA-CAGG-AAAGGAGAACAAGATCACCATCACCAATGACAGGGGCC 83735541 Query 452427 GTTTATCTAAAGAAGATATTGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGGATGATG 452486 || ||| ||||||||||| ||||| | ||||| ||||| | ||| | ||| | Sbjct 83735540 ACTTGAGTAAGGAAGATATTGAGCGCATGGTCCAAGAAGCTGAAAAGTACAAAGCTGAGG 83735481 Query 452487 ATGA 452490 |||| Sbjct 83735480 ATGA 83735477 Score = 105 bits (116), Expect = 3e-17 Identities = 391/604 (65%), Gaps = 18/604 (3%) Strand=Plus/Minus Query 451896 ATGAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCA-AGATATGTT---G 451951 |||| ||||| | || || |||||||| |||| || || ||||| | || | | | Sbjct 83738122 ATGATATTGTCTTGGTGGGTGGTTCTACCAGAATCCCCAAGATTCAGAAATTTCTGCAAG 83738063 Query 451952 TCTTCTTATTTTGGAGGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCA 452011 |||||| | |||||| | || |||||| | || || |||||||||||||| Sbjct 83738062 ACTTCTTCAAT----GGAAAAGAGCTGAACAAGAGCATTAACCCCGATGAAGCTGTTGCC 83738007 Query 452012 TATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCAGATGA---TGAAAAATTAGGA 452068 |||||||| || || || ||||| |||||| | || ||| | ||| || | Sbjct 83738006 TATGGTGCAGCTGTCCAGGCAGCCATTCTATCTGG---AGACAAGTCTGAGAATGTTCAG 83737950 Query 452069 GATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATG 452128 ||| | ||| | | ||||| || ||||| || ||||| ||||||| ||||| || | Sbjct 83737949 GATTTGCTGCTCTTGGATGTCACTCCTCTTTCCCTTGGTATTGAAACTGCTGGCGGGGTC 83737890 Query 452129 ATGACTAATTTAATTAAACGAGGAACTTCTATTCCTTGTAAAAAGAGTCAAACATTTAGT 452188 |||||| | || || | || | || ||| || ||| || || || | Sbjct 83737889 ATGACTGTCCTCATCAAGTGCAATACCACCATCCCTACCAAGCAGACACAGACTTTCACC 83737830 Query 452189 ACAGCAAGTGATAACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCAATG 452248 || ||| ||||| || |||||| ||||| |||| |||||| ||| | || | | Sbjct 83737829 ACCTACTCTGACAACCAGCCTGGTGTACTCATTCAGGTGTATGAAGGTGAAAGGGCCACG 83737770 Query 452249 ACACGAGATAATAATAAACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCAAGG 452308 || || || || || ||| | || || | ||| ||||| || | Sbjct 83737769 ACCAAGGACAACAACCTGCTTGGAAAGTTCGAGCTCACGGGCATCCCTCCAGCACCCCGT 83737710 Query 452309 GGAACTCCTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAGT 452368 || |||||| ||||| |||| | ||| | ||||| ||||| || || ||||| | Sbjct 83737709 GGGGTTCCTCAGATTGAGGTTACTTTTGACATCGATGCCAATGGCATCCTCAATGTTTCT 83737650 Query 452369 GCAGTTG-AAAAATCATCTGGAAAATCAGAA-AAAATTACAATTACTAATGATAAAAACC 452426 || || | || | || | || ||| |||| || || || || || ||||| | || Sbjct 83737649 GCTGTAGTTAAGAGCA-CAGG-AAAGGAGAACAAGATCACCATCACCAATGACAGGGGCC 83737592 Query 452427 GTTTATCTAAAGAAGATATTGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGGATGATG 452486 || ||| ||||||||||| ||||| | ||||| ||||| | ||| | ||| | Sbjct 83737591 ACTTGAGTAAGGAAGATATTGAGCGCATGGTCCAAGAAGCTGAAAAGTACAAAGCTGAGG 83737532 Query 452487 ATGA 452490 |||| Sbjct 83737531 ATGA 83737528 >seq20 Length=148322235 Score = 113 bits (124), Expect = 2e-19 Identities = 195/283 (69%), Gaps = 9/283 (3%) Strand=Plus/Minus Query 451320 ATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATG 451379 |||| || || || || | |||||||||||| || |||| || || || ||||| |||| Sbjct 43117656 ATGCTGTGATCACAGTCTCTGCTTATTTCAATTATTCACAGCGACAGGCCACTAAGGATG 43117597 Query 451380 CAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTC 451439 | || || || |||| ||||||| ||| || | || |||| |||||||| ||||||| Sbjct 43117596 CTGGTCAGATATCTGGGCTAAATGTGCTTTGAGTGATCGATGAGCCTACAGCTGCTGCTC 43117537 Query 451440 TAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATT 451499 |||| || || || ||| | || | ||||| ||| ||| || | ||| | Sbjct 43117536 TAGCTTAAGGTCT-GGACA--------AATCTGAAGATAAAGTCATTGCTGTGTATGACT 43117486 Query 451500 TTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAA 451559 | ||||| ||||| ||| | |||| || ||||| | || || ||||| || | Sbjct 43117485 TAGGTGGTGGAACCTTTGACATTTCTACCCTGGAGATTGAGAAAGGAGTGTTTGAGGTGA 43117426 Query 451560 AGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGA 451602 | | |||||||| || || ||||||| ||||| |||| Sbjct 43117425 AATCTACCAATGGGGACCCTTTCTTAGGAGGGGAAGACTTTGA 43117383 Score = 107 bits (118), Expect = 8e-18 Identities = 172/243 (71%), Gaps = 3/243 (1%) Strand=Plus/Minus Query 451208 CAAGTAAATTATAAAGGTGAAACTAAAACTTT-TGCTCCTGAAGAAATTTCATCTATGGT 451266 ||||| | || ||||| || || |||| ||| | ||| || ||| | || || ||||| Sbjct 12505862 CAAGTTGAATACAAAGGGGAGACAAAAAGTTTCTACTCA-GAGGAAGTGTCCTCAATGGT 12505804 Query 451267 TCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGT 451326 ||| || | || || |||| | | || ||| |||| | ||||| |||| || Sbjct 12505803 TCTGACACAGATAAAGGAAATTGGATAAGCTTATCTTGGAAAAACTGTTACCAATGCTGT 12505744 Query 451327 AATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACA 451386 | || || || ||||||||||||||| | || | || ||||| |||||||| ||| Sbjct 12505743 GGTCACAGTGCCAGCTTATTTCAATGATTCTCAGGGTCAGGCAAC-AAAGATGCTGGAAC 12505685 Query 451387 TATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATA 451446 |||||||| |||| || || |||||| |||||||| || || |||||| | || || Sbjct 12505684 TATTGCTGACCTAAAGGTATTTTTAATTATCAATGAACCAACTGCTGCTGCTATTGCTTA 12505625 Query 451447 TGG 451449 ||| Sbjct 12505624 TGG 12505622 Score = 91.5 bits (100), Expect = 6e-13 Identities = 152/217 (70%), Gaps = 6/217 (3%) Strand=Plus/Plus Query 96049 TGCAATTTGTGGCACTAGGGGATCGTCAGGATTTGGGTCAGC---CAATAAACTGCATAA 96105 |||||| | |||||||||||| || || || ||||| ||| || | ||| | || Sbjct 57021526 TGCAATCTCTGGCACTAGGGGGTCATCTGGGTTTGGATCACATAGCAGTGAAC-GAAT-- 57021582 Query 96106 GGATAAAAGTACTTTACTAATGTTTAATGCTGGGCTCCAGTTATTTTTTAAAATATCTAA 96165 ||||||||| |||||| ||| |||| || || ||| | | ||| |||||| | Sbjct 57021583 GGATAAAAGAACTTTAGAAATAGTTAAAGCAGGAGACCACTGTGATCTTAGAATATCAAG 57021642 Query 96166 ACAAATTGCACCTGTAGTACTAATATTTGGATGATAAATAGGAGTTTTAAATATAATTTT 96225 |||||| || || | ||||||||||||||||||| ||| ||||| || || Sbjct 57021643 ACAAATGCTGCCATTACTGTTAATATTTGGATGATAAATTCTTGTTGTAAATGCAACCTT 57021702 Query 96226 AGGAGGCTTATATGGATAGTCTTCAGGAAAAGTAATT 96262 ||| || || | || |||||| ||||||| |||| Sbjct 57021703 AGGTGGTTTGAAGGGGTAGTCTGTAGGAAAATGAATT 57021739 >seq18 Length=130317789 Score = 96.9 bits (106), Expect = 1e-14 Identities = 170/245 (69%), Gaps = 2/245 (1%) Strand=Plus/Minus Query 96048 ATGCAATTTGTGGCACTAGGGGATCGTCAGGATTTGGGTCAGCCAATAAACTGCATAAGG 96107 ||||||| | |||||||||||| || || || ||||| ||| | || || | || Sbjct 24194250 ATGCAATCTCTGGCACTAGGGGGTCATCTGGGTTTGGATCACATAGTAGTGAACAAATGG 24194191 Query 96108 ATAAAAGTACTTTACTAAT-GTTTAATGCTGGGCTCCAGTTATTTTTTAAAATATCTAAA 96166 ||||||| |||||| || |||||| || || ||| | | ||| |||||| | | Sbjct 24194190 ATAAAAGAACTTTAGAAACAGTTTAA-GCAGGAGACCACTGTGATCTTAGAATATCAAGA 24194132 Query 96167 CAAATTGCACCTGTAGTACTAATATTTGGATGATAAATAGGAGTTTTAAATATAATTTTA 96226 ||||| || || | ||||||||||||||||||| ||| ||||| ||| ||| Sbjct 24194131 CAAATGCTGCCATTACTGTTAATATTTGGATGATAAATTTTTGTTGTAAATGTAACCTTA 24194072 Query 96227 GGAGGCTTATATGGATAGTCTTCAGGAAAAGTAATTTCTAATTGGAATACTCCACCCTCA 96286 || || || | || |||||| ||| ||| |||| || |||||| ||||| | | Sbjct 24194071 GGTGGTTTGAAGGGGTAGTCTGTAGGGAAATGAATTGTCAAAAAGAATACACCACCTTGA 24194012 Query 96287 TAGGG 96291 || || Sbjct 24194011 TATGG 24194007 Score = 89.7 bits (98), Expect = 2e-12 Identities = 132/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 391081 AAACTATTACTCTTGATGTTGAATCATCTGATAACATTGAAGCTATTAAACAAAAAATTC 391140 |||| || || ||||| |||||| | || || | || ||| | | || || || | Sbjct 111279854 AAACCATCACGCTTGAGGTTGAACCCTCGGACACTATAGAAAATGTAAAGGCCAAGATCC 111279795 Query 391141 AAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAATTTTCTCAGGGAAACAACTTG 391200 | |||||||||||||||||||||||||| || | | | || | || || || || | Sbjct 111279794 AGGATAAGGAAGGAATTCCTCCTGATCAGCAGAGGCTGGTCTTTGCTGGTAAGCAGCTGG 111279735 Query 391201 AAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGGATGCAACACTTCACTTAGTAT 391260 ||||||| | |||||| | || || || ||| | ||||| | || ||||| || || | Sbjct 111279734 AAGATGGCCGGACTTTGTCTGACTACAACATTCAAAAGGAGTCCACCCTTCATTTGGTGT 111279675 Query 391261 TAAGACT 391267 | ||||| Sbjct 111279674 TGAGACT 111279668 >seq17 Length=136257712 Score = 93.3 bits (102), Expect = 2e-13 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 391062 GTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACATTGAA 391121 || || || || || || ||||| || || || || |||||| | || || | || ||| Sbjct 39746322 GTGAAGACCCTTACGGGGAAAACCATCACGCTAGAGGTTGAACCCTCGGACACTATAGAA 39746381 Query 391122 GCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAATT 391181 | | || || || || |||||||||||||||||||||||||| || | | || Sbjct 39746382 AATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAGCAGAGGCTGATC 39746441 Query 391182 TTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGGAT 391241 || | || || || || |||||||| | |||||| | || || || ||| | ||||| Sbjct 39746442 TTTGCTGGTAAGCAGCTGGAAGATGGCCGGACTTTGTCTGACTACAACATTCAAAAGGAG 39746501 Query 391242 GCAACACTTCACTTAGTATTAAGACT 391267 | || ||||| | || || ||||| Sbjct 39746502 TCTACCCTTCATCTGGTGTTGAGACT 39746527 >seq12 Length=182815943 Score = 91.5 bits (100), Expect = 6e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 ||||| ||||||| ||||||| || ||||| ||||||||||| || ||||||||||| Sbjct 33141179 GTTACCCATGCAGTTGTTACTGTACCAGCTTACTTCAATGATGCCCAGCGGCAAGCAACC 33141238 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACC 451425 |||||||| || ||||||||| | ||||| | | || || ||||| || Sbjct 33141239 AAAGATGCTGGCACTATTGCTGGACTGAATGTCATGAGGATCATCAATGAGCC 33141291 >seq3 Length=125065471 Score = 91.5 bits (100), Expect = 6e-13 Identities = 171/247 (69%), Gaps = 6/247 (2%) Strand=Plus/Minus Query 96048 ATGCAATTTGTGGCACTAGGGGATCGTCAGGATTTGGGTCAGCCAATAAACTGCATAA-- 96105 ||||||| | |||||||||||| || || || ||||| ||| || | || | || Sbjct 8537092 ATGCAATCTCTGGCACTAGGGGGTCATCTGGGTTTGGATCA--CATATCAGTGAACAAAT 8537035 Query 96106 GGATAAAAGTACTTTACTAATGTTTAATGCTGGGCTCCAGTTATTTTTTAAAATATCTAA 96165 ||||||||| ||||| ||| |||| || || ||| | | ||| |||||| | Sbjct 8537034 GGATAAAAGAACTTTGGAAATAGTTAAAGCAGGAGACCACTGTGATCTTAGAATATCAAG 8536975 Query 96166 ACAAATTGCACCTGTAGTACTAATATTTGGATGATAAATAGGAGTTTTAAATATAATTTT 96225 |||||| || || | || |||||||||||||||| ||| ||||| || || Sbjct 8536974 ACAAATGCTGCCATTACTGTTACTATTTGGATGATAAATTCTTGTTGTAAATGCAACCTT 8536915 Query 96226 AGGAGGCTTATATGGATAGTCTTCAGGAAAA-GTAATTTCTAATTGGAATACTCCACCCT 96284 ||| || || | || |||||| ||||||| | ||| || || |||||| ||||| | Sbjct 8536914 AGGTGGTTTGAAGGGGTAGTCTGTAGGAAAATGAAATATC-AAAAAGAATACACCACCTT 8536856 Query 96285 CATAGGG 96291 ||| || Sbjct 8536855 GATATGG 8536849 >seq7 Length=104786220 Score = 86.0 bits (94), Expect = 2e-11 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 127419 ATATGCTTCCGAAATTTCTTTAAATTTTTGTTCAGCTTCTTGTTTGTTATTTTGATTCTT 127478 |||||| || | | |||||| |||||| | || ||||| | ||| || | | |||| || Sbjct 81012571 ATATGCCTCGGCGACTTCTTTGAATTTTCGCTCTGCTTCCTCTTTATTTTCTGGATTTTT 81012630 Query 127479 ATCAGGATGATGTTTAACAGCTAATTTACGGTAAGCTTTTTTAATTTCTGCT 127530 ||||||||| ||||| |||| |||||| |||||| ||||||| ||| || Sbjct 81012631 ATCAGGATGCCATTTAAGTGCTACTTTACGATAAGCTCTTTTAATGTCTTCT 81012682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975581603727632