Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20spretus_20[genbank_20GCA_5F001624865.1_202016-04-26] 5,404 sequences; 2,625,587,472 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq1 190 2e-42 seq13 168 5e-36 seq20 159 3e-33 seq6 152 4e-31 seq12 122 7e-22 seq19 120 2e-21 seq17 86.0 5e-11 >seq1 Length=198846266 Score = 190 bits (210), Expect = 2e-42 Identities = 376/547 (69%), Gaps = 17/547 (3%) Strand=Plus/Plus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 || || ||| | || ||||| || ||||| ||||| | || |||| || || ||| Sbjct 46278579 GGCATTGATCTTGGCACCACCTACTCCTGTGTGGGTGTCTTCCAGCATGGAAAGGTGGAA 46278638 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 |||||||||||||| || |||||| | || || | | | ||| ||||||| || || Sbjct 46278639 ATTATTGCCAATGACCAGGGTAACCGCACCACGTGAGCC-ACGTTGCTTTCACAGACACA 46278697 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCAAGC--CACTGGTAATCCTACCAATACTA 550175 || | ||| |||| ||||| || || |||| | || || ||||| ||||| || Sbjct 46278698 GAGCGATTAATTGGGGATGCGGCCAAGAATCAGGTTGCAATG--AATCCCACCAACACAG 46278755 Query 550176 TTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATA 550235 ||||| |||| ||| |||| || || || ||| ||||| | ||||||| | |||| Sbjct 46278756 TTTTTTATGCCAAATGTTTGATCGGGCATAGGTTTGATGATGCTGTTGTTCAGTCTGATA 46278815 Query 550236 TGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAG----CT 550291 ||||||| ||||| ||| | || |||| | | || | || | || ||| | Sbjct 46278816 TGAAGCACTGGCCCTTCATGGTGGTGAATGATGCAGGCAGGCCCAAGGTTCAAGTGGAAT 46278875 Query 550292 ACTCATGAAGGATCTGTTAAACAATTT-TCACCAGAACAAATTTCATCTATGGTTTTAAT 550350 || | | ||| | ||| | ||| | ||||| || | || ||||||||| | | Sbjct 46278876 ACAAAGG--GGA---GACAAAAAGTTTCTACCCAGAGGAAGTGTCCTCTATGGTTCTGAC 46278930 Query 550351 GAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGA-AGTTACGGATGCAGTAATAA 550409 || ||||| ||| || || | | | |||| ||||| |||| || | | Sbjct 46278931 AAAGATGAAGGAAATTGCAGAAGCGTACCTCAG-AAAGACTGTTACCAATGCTGTGGTCA 46278989 Query 550410 CTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTG 550469 | || || || || || |||||||| || || || || || |||||||||||| ||||| Sbjct 46278990 CAGTGCCTGCTTACTTCAATGACTCTCAGCGACAGGCAACAAAAGATGCTGGAACTATTG 46279049 Query 550470 CTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGAC 550529 |||| || ||||| ||||| || ||||||||||| ||||||||||| |||| ||||| Sbjct 46279050 CTGGCCTCAATGTACTTCGAATCATCAATGAACCAACTGCTGCTGCTATTGCTTATGGCT 46279109 Query 550530 TTGATAA 550536 | ||||| Sbjct 46279110 TAGATAA 46279116 Score = 143 bits (158), Expect = 2e-28 Identities = 363/548 (66%), Gaps = 38/548 (7%) Strand=Plus/Plus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 || || ||| | || ||||| ||| ||||| ||||| | || |||| || || ||| Sbjct 109838800 GGCATTGATCTTGGCACCACCTATTCCTGTGTGGGTGTCTCCCAGCATGGAAAGGTGGAA 109838859 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 |||||||||||||| || ||||| | || | || || || |||||||||| || Sbjct 109838860 ATTATTGCCAATGACCAGTGTAACTGCACCATGCCGAGCTACATTGCTTTCACGGACACA 109838919 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCAAGC--CACTGGTAATCCTACCAATACTA 550175 || || ||| |||| |||| || || |||| | || || || || ||||| || Sbjct 109838920 GAGCAATTAATTGGGGATGAGGCCAAGAATCAGGTTGCAATG--AACCCCACCAACACAG 109838977 Query 550176 TTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATA 550235 |||||||||| | | | ||||| | ||||||| | |||| Sbjct 109838978 TTTTTGATGCCATAGG--------------------ATGATGCTGTTGTTCAGTCTGATA 109839017 Query 550236 TGAAGCATTGGCCTTTCCAAATTGTTA---ATGTTTCTGGAAAACCTTATATTGAAGCTA 550292 ||||||| ||||| ||| || || | ||| | | || | || || | ||| Sbjct 109839018 TGAAGCACTGGCCCTTC---ATGGTGATGGATGATGCAGGCAGGCCCTAGGTCCAAGTGG 109839074 Query 550293 CTCATGAAGGATCTGTTA-AACAATTTTCA--CCAGAACAAATTTCATCTATGGTTTTAA 550349 | |||| | | || || |||| ||||| || | || || |||||| | | Sbjct 109839075 AATACAAAGGG---GACACAAAAACTTTCTACCCAGAGGAAGTGTCCTCCATGGTTCTGA 109839131 Query 550350 TGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAA-GTTACGGATGCAGTAATA 550408 || ||||| |||| || || | | || |||| ||||| |||| || | Sbjct 109839132 CAAAGATGAAGGAAACTGCAGAAGCATACCTCGGA-AAGATTGTTACCAATGCTGTGGTC 109839190 Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 || || ||||| || || |||||||| || || || || || |||||||||||| |||| Sbjct 109839191 ACAGTGCCAGCTTACTTCAATGACTCTCAGCGACAGGCAACAAAAGATGCTGGAACTATT 109839250 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 ||||| || ||||| ||| | || ||||||||||| ||||||||||| |||| ||||| Sbjct 109839251 GCTGGCCTCAATGTACTTAGAATCATCAATGAACCAACTGCTGCTGCTATTGCTTATGGC 109839310 Query 550529 CTTGATAA 550536 | ||||| Sbjct 109839311 TTAGATAA 109839318 Score = 116 bits (128), Expect = 3e-20 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450 ||||| |||| || | || || || | || || |||||||| || || || || || Sbjct 52412134 GTTACCAATGCTGTGGTCACAGTGCCCACTTACTTCAATGACTCTCAGCGACAGGCAACA 52412193 Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510 |||||||||||| ||||||||| || | ||| ||||| || ||||||||||| |||||| Sbjct 52412194 AAAGATGCTGGAACTATTGCTGGCCTCAGTGTACTTCGAATCATCAATGAACCAACTGCT 52412253 Query 550511 GCTGCACTTGCATATGGACTTGATAAACATAATGATCAAGAACTTAATGTACTCATCTTT 550570 ||||| |||| ||||| | ||||| | || ||| ||||| ||||| ||| Sbjct 52412254 GCTGCTATTGCTTATGGCTTAGATAAGAAGGTTGGAGCTGAAAGGAATGTGCTCATTTTT 52412313 Query 550571 GATTGTGGAGGT 550582 |||| |||||| Sbjct 52412314 GATTTGGGAGGT 52412325 Score = 91.5 bits (100), Expect = 1e-12 Identities = 204/301 (68%), Gaps = 8/301 (3%) Strand=Plus/Minus Query 552086 AGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAG 552145 |||| | || | ||||| || | | ||||| | ||| | || ||||| ||||| || Sbjct 7852531 AGATGCCAAACTAGATAAGTCACAGATTCATGATACTGTCTTGGTGGGTGGTTCTACCAG 7852472 Query 552146 AATTCCTAAAATTCGCGAAATGTT--AAGTTCTTATTTCAATGGTAAAAAATTAAATGAA 552203 ||| | || |||| || | | ||| ||| || |||||| ||| || | ||| | Sbjct 7852471 AATCTCCAAGATTCAAAAACTTCTGCAAGA-CTTCTT-CAATGGAAAAGAACTGAATAAG 7852414 Query 552204 AGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCT 552263 | |||| || ||||| |||||||||||| |||| || | || |||||| |||| ||| Sbjct 7852413 AACATTAACCCTGATGAAGCTGTTGCCTATAGTGCAGCTGTGCAGGCAGCTGTTCTATCT 7852354 Query 552264 GGA--CAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTC 552321 ||| ||| | ||| | | || || | | || | ||||| | |||||| || | Sbjct 7852353 GGAGTCAAGTCTACGAATA--TTCAGGATTTGCTGCTCTTGGATGTCAGTCCTCTTTCCC 7852296 Query 552322 TTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTC 552381 ||||| | ||||| | | | || | |||||| || ||| | || ||||| || |||| Sbjct 7852295 TTGGTATTGAAACTGCTAGTGGAGTCATGACTGTCCTCATCAAGAGCAATACCACCATTC 7852236 Query 552382 C 552382 | Sbjct 7852235 C 7852235 >seq13 Length=160222558 Score = 168 bits (186), Expect = 5e-36 Identities = 355/518 (69%), Gaps = 15/518 (3%) Strand=Plus/Minus Query 550025 TGTGTTGGTGTTTGGCAA-AATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAG 550083 ||||| ||||| | || ||||| || || ||||| ||||||||||| || |||||| Sbjct 39255635 TGTGTGGGTGTCTTCCAGCAATGGAAAGGTGGAAATAATTGCCAATGACCAGGGTAACCA 39255576 Query 550084 AACTACTCCATCTTATGTTTCTTTCACGGAAACTGAACATTTAGTTGGTGATGCAGCAAA 550143 || || ||| ||| || ||||||| || || || || ||| |||| |||||||| || Sbjct 39255575 CACCACGCCAAGTTACATTGCTTTCACTGACACAGAGCAATTAATTGGGGATGCAGCCAA 39255516 Query 550144 ATATCAAG--CCACTGGTAATCCTACCAATACTATTTTTGATGCTAAACGTTTAAT-TGG 550200 |||| | || || || | |||| || ||||| |||| |||||| | || || Sbjct 39255515 GAATCAGGTAGCAATG--AACC---CCAACACAGTTTTTTATGCCAAACGTCTGATCGGG 39255461 Query 550201 AAGAAGTTTTAATGATTCGACTGTTCAGGCAGATATGAAGCATTGGCCTTTCCAAATTGT 550260 | | |||| | |||| | ||||||| | ||||||||||| ||||| ||| | || Sbjct 39255460 CATAGGTTTGATTGATGCTGTTGTTCAGTCTGATATGAAGCACTGGCCCTTCATGGTGGT 39255401 Query 550261 TAATGTTTCTGGAAAACCTTATATTGAAGCTACTCATGAAGGATCTGTTAAACAATTTTC 550320 |||| | | || | || | | ||| || |||| | ||| | |||| Sbjct 39255400 GAATGATGCAGGCAGGCCCAAGGTCCAAGTGGGACA--AAGG-GGAGACAAAAAGTTTTT 39255344 Query 550321 AC-CAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTG 550379 || |||| || | || || |||||| | | || ||||| ||| || | | | | Sbjct 39255343 ACTCAGAGGAAGTGTCCTCCATGGTTCTGACAAAGATGAAGGAAATTGCAAAAACATACG 39255284 Query 550380 TTGGTCAAGA-AGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAA 550438 | | |||| ||||| ||| || | | || ||||| || || |||||||| || Sbjct 39255283 TCTG-AAAGACTGTTACCAATGTGGTGGTCCCAGTGCCAGCTTACTTCAATGACTCCCAG 39255225 Query 550439 CGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAAT 550498 | || || || |||||||||||| ||||||||| || |||||||||| | |||||| Sbjct 39255224 TGGCAGGCAACAAAAGATGCTGGAACTATTGCTGGCCTCAATGTTCTTCAAGTCATCAAT 39255165 Query 550499 GAACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536 ||||| ||||||||||| |||| ||||| | ||||| Sbjct 39255164 GAACCAACTGCTGCTGCTATTGCTTATGGCTTAGATAA 39255127 >seq20 Length=148322235 Score = 159 bits (176), Expect = 3e-33 Identities = 329/482 (68%), Gaps = 13/482 (3%) Strand=Plus/Minus Query 550049 AAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTC 550108 || || ||||| ||||||||||| || |||||| | || || || | ||| ||||| Sbjct 12506093 AAGGTGGAAATAATTGCCAATGACCAGGGTAACTGTACCACACCGT-----GTTGCTTTC 12506039 Query 550109 ACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGC--CACTGGTAATCCTA 550166 || | || | || ||| |||| |||||||| || |||| | || || || | | Sbjct 12506038 ACTAACACACAGCAATTATTTGGGGATGCAGCCAAGAATCAGGTTGCAATG--AACCTGA 12505981 Query 550167 CCAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTC 550226 |||| || | |||||||| ||| || | |||||| | || ||| || || | ||||| Sbjct 12505980 CCAACAC-AGCTTTGATGCCAAATGTCTGATTGGATGTAGGTTTGATAATGCTGTTGTTC 12505922 Query 550227 AGGCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTG 550286 || | ||||||||||| ||||||||| | || |||| | |||| | ||| | | Sbjct 12505921 AGTCTGATATGAAGCACTGGCCTTTCATGGTGGTGAATGATGCTGGCAGGCCTAAGGTCC 12505862 Query 550287 AAGCTACTCATGAAGGATCTGTTAAACAATTTTCAC-CAGAACAAATTTCATCTATGGTT 550345 ||| | | |||| | ||| | ||| || |||| || | || || |||||| Sbjct 12505861 AAGTTGAATACAAAGG-GGAGACAAAAAGTTTCTACTCAGAGGAAGTGTCCTCAATGGTT 12505803 Query 550346 TTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTA 550405 | | | || || ||| | |||| | |||| || ||||| |||| || Sbjct 12505802 CTGACACAGATAAAGGAAATTGGATAAGCTTATCTTGGAAAAACTGTTACCAATGCTGTG 12505743 Query 550406 ATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGT 550465 | || || ||||| ||||| ||||| || || |||| || || |||||||||||| | Sbjct 12505742 GTCACAGTGCCAGCTTATTTCAATGATTCTCAGGGTCAGGCAAC-AAAGATGCTGGAACT 12505684 Query 550466 ATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATAT 550525 ||||||| || || || || |||||||||||||| ||||||||||| |||| ||| Sbjct 12505683 ATTGCTGACCTAAAGGTATTTTTAATTATCAATGAACCAACTGCTGCTGCTATTGCTTAT 12505624 Query 550526 GG 550527 || Sbjct 12505623 GG 12505622 Score = 86.0 bits (94), Expect = 5e-11 Identities = 198/296 (67%), Gaps = 2/296 (1%) Strand=Plus/Minus Query 552295 TACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTA 552354 |||| | ||||| ||||| || ||||| ||| | || || | |||||| | | || | Sbjct 43117076 TACTCCTGGATGTCACTCCCCTCTCTCTGGGTATTGAGACTCTGGGAGGTGTCTTTACCA 43117017 Query 552355 ATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATT 552414 | |||| | ||||| || | ||||||| ||||| | || |||| ||| | Sbjct 43117016 AACTTACTTACAGAAACACCAGTATTCCTACCAAAAAGAGCCAGGTGTTTTTTACTGCTG 43116957 Query 552415 CAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAG 552474 | ||| |||||| || || || | | | | |||||| || | | || ||| Sbjct 43116956 CTGATGGACAAACTCAAGTAGAGGTTAAAGTGTGTCAGGGAGAACGAGAGATGGCTGAAG 43116897 Query 552475 ATAATAATCAACTTGGTACTTTTAATTTAGAA-GGTATTCCTCCTGCTCCTCGTGGAGTA 552533 | || || | || || || || | || || || ||||| || || ||||||||||| Sbjct 43116896 ACAACAAACTTCTAGG-ACAGTTCACTTTGATTGGAATTCCCCCAGCCCCTCGTGGAGTG 43116838 Query 552534 CCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGC 552589 || || | ||||||||| || || || ||||||||||| ||| || | || |||| Sbjct 43116837 CCCCAGACTGAAGTTACATTTGACATTGATGCCAATGGGATTGTGCACGTTTCTGC 43116782 >seq6 Length=117542938 Score = 152 bits (168), Expect = 4e-31 Identities = 394/593 (66%), Gaps = 18/593 (3%) Strand=Plus/Minus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 || || ||| | || ||||| || ||||| ||||| | || |||| || || ||| Sbjct 83739089 GGCATTGATCTTGGCACCACCTACTCCTGTGTGGGTGTCTTCCATCATGGAAAGGTGGAA 83739030 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 |||||||||||||| || |||||| | || || | || ||| ||||||| || || Sbjct 83739029 ATTATTGCCAATGACCAGGGTAACCGCACCACGACGAGCTACGTTGCTTTCACCGACACA 83738970 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGT----AATCCTACCAATAC 550173 || ||| |||| |||| || || |||| | | || || || ||||| || Sbjct 83738969 GAGAGATTAATTGGGAATGCGGCCAAGAATCAGG----TTGTAAAGAAGCCCACCAACAC 83738914 Query 550174 TATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGA 550233 |||||||||| |||||| || | | || ||| ||||| | ||||||| | || Sbjct 83738913 AGTTTTTGATGCCAAACGTCAGATCAGGCGTAGGTTTGATGATGCTGTTGTTCAGTCTGA 83738854 Query 550234 TATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTAC 550293 ||||||||| ||||| ||| | || |||| | | || | || | | ||| Sbjct 83738853 TATGAAGCACTGGCCCTTCATGGTGGTGAATGATGCAGGCAGGCCCAAGGTCCAAGTGGA 83738794 Query 550294 TCATGAAGGATCTGTTA-AACAATTTTC--ACCAGAACAAATTTCATCTATGGTTTTAAT 550350 | |||| | | ||||| |||| ||||| || | || || |||||| | | Sbjct 83738793 ATACAAAGG---GGAGACAACAAGTTTCTACCCAGAGGAAGTGTCCTCCATGGTTCTGAC 83738737 Query 550351 GAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGA-AGTTACGGATGCAGTAATAA 550409 || ||||| ||| || || | | || |||| |||| |||| || | | Sbjct 83738736 AAAGATGAAGGAAATTGCAGAAGCGTACCTCGG-AAAGACTGTTATCAATGCTGTGGTCA 83738678 Query 550410 CTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTG 550469 | || | || || || ||||||| || || || || || |||||||||||| ||||| Sbjct 83738677 CAGTGTCGGCTTACTTCAATGACT--CAGCGACAGGCAACAAAAGATGCTGGAACTATTG 83738620 Query 550470 CTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGAC 550529 |||| || ||||| ||||| || ||||||||||| ||||||||||| |||| |||| Sbjct 83738619 CTGGCCTCAATGTACTTCGAATCATCAATGAACCAACTGCTGCTGCTATTGCTAATGGCT 83738560 Query 550530 TTGATAAACATAATGATCAAGAACTTAATGTACTCATCTTTGATTGTGGAGGT 550582 | ||||| | || ||| ||||| ||||| ||||| | |||||| Sbjct 83738559 TAGATAAGAAGGTTGGAGCTGAAAGGAATGTGCTCATTTTTGACTTGGGAGGT 83738507 Score = 141 bits (156), Expect = 7e-28 Identities = 322/480 (67%), Gaps = 6/480 (1%) Strand=Plus/Minus Query 552114 CATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAATGTT---A 552170 ||||| ||||| | || ||||| ||||| ||||| || || |||| ||||| | | Sbjct 83736072 CATGATATTGTCTTGGTGGGTGGTTCTACCAGAATCCCCAAGATTCA-GAAATTTCTGCA 83736014 Query 552171 AGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCC 552230 || ||| || |||||| ||| | | || | || |||| || ||||| ||||||||| Sbjct 83736013 AGA-CTTCTT-CAATGGAAAAGAGCTGAACAAGAGCATTAACCCCGATGAAGCTGTTGCC 83735956 Query 552231 TATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAACTGATGAAAAACTACAAAAT 552290 |||||||| || | || ||||| ||||| |||||| | | ||| || | || || Sbjct 83735955 TATGGTGCAGCTGTCCAGGCAGCCATTCTATCTGGAGACAAGTCTGAGAATGTTCAGGAT 83735896 Query 552291 ATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATG 552350 | | || | ||||| |||||||| || |||||| | ||||| | ||| || | ||| Sbjct 83735895 TTGCTGCTCTTGGATGTCACTCCTCTTTCCCTTGGTATTGAAACTGCTGGCGGGGTCATG 83735836 Query 552351 ACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACG 552410 ||| || ||| | | ||||| || || ||| || | | | || | || Sbjct 83735835 ACTGTCCTCATCAAGTGCAATACCACCATCCCTACCAAGCAGACACAGACTTTCACCACC 83735776 Query 552411 TATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACT 552470 || || || || || ||| ||| ||||| | | |||||| ||||| || Sbjct 83735775 TACTCTGACAACCAGCCTGGTGTACTCATTCAGGTGTATGAAGGTGAAAGGGCCACGACC 83735716 Query 552471 AAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGA 552530 || || || || | ||||| | || | | || || ||||| || || ||||| Sbjct 83735715 AAGGACAACAACCTGCTTGGAAAGTTCGAGCTCACGGGCATCCCTCCAGCACCCCGTGGG 83735656 Query 552531 GTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCT 552590 || || || ||||| |||||||| || |||||||||||||| || | ||||| ||||| Sbjct 83735655 GTTCCTCAGATTGAGGTTACTTTTGACATCGATGCCAATGGCATCCTCAATGTTTCTGCT 83735596 Score = 141 bits (156), Expect = 7e-28 Identities = 322/480 (67%), Gaps = 6/480 (1%) Strand=Plus/Minus Query 552114 CATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAATGTT---A 552170 ||||| ||||| | || ||||| ||||| ||||| || || |||| ||||| | | Sbjct 83738123 CATGATATTGTCTTGGTGGGTGGTTCTACCAGAATCCCCAAGATTCA-GAAATTTCTGCA 83738065 Query 552171 AGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCC 552230 || ||| || |||||| ||| | | || | || |||| || ||||| ||||||||| Sbjct 83738064 AGA-CTTCTT-CAATGGAAAAGAGCTGAACAAGAGCATTAACCCCGATGAAGCTGTTGCC 83738007 Query 552231 TATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAACTGATGAAAAACTACAAAAT 552290 |||||||| || | || ||||| ||||| |||||| | | ||| || | || || Sbjct 83738006 TATGGTGCAGCTGTCCAGGCAGCCATTCTATCTGGAGACAAGTCTGAGAATGTTCAGGAT 83737947 Query 552291 ATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATG 552350 | | || | ||||| |||||||| || |||||| | ||||| | ||| || | ||| Sbjct 83737946 TTGCTGCTCTTGGATGTCACTCCTCTTTCCCTTGGTATTGAAACTGCTGGCGGGGTCATG 83737887 Query 552351 ACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACG 552410 ||| || ||| | | ||||| || || ||| || | | | || | || Sbjct 83737886 ACTGTCCTCATCAAGTGCAATACCACCATCCCTACCAAGCAGACACAGACTTTCACCACC 83737827 Query 552411 TATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACT 552470 || || || || || ||| ||| ||||| | | |||||| ||||| || Sbjct 83737826 TACTCTGACAACCAGCCTGGTGTACTCATTCAGGTGTATGAAGGTGAAAGGGCCACGACC 83737767 Query 552471 AAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGA 552530 || || || || | ||||| | || | | || || ||||| || || ||||| Sbjct 83737766 AAGGACAACAACCTGCTTGGAAAGTTCGAGCTCACGGGCATCCCTCCAGCACCCCGTGGG 83737707 Query 552531 GTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCT 552590 || || || ||||| |||||||| || |||||||||||||| || | ||||| ||||| Sbjct 83737706 GTTCCTCAGATTGAGGTTACTTTTGACATCGATGCCAATGGCATCCTCAATGTTTCTGCT 83737647 Score = 107 bits (118), Expect = 2e-17 Identities = 284/427 (67%), Gaps = 10/427 (2%) Strand=Plus/Minus Query 550160 AATCCTACCAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCG 550219 || || ||||| || |||||||||| |||||| || | | || ||| ||||| | Sbjct 83736876 AAGCCCACCAACACAGTTTTTGATGCCAAACGTCAGATCAGGCGTAGGTTTGATGATGCT 83736817 Query 550220 ACTGTTCAGGCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCT 550279 ||||||| | ||||||||||| ||||| ||| | || |||| | | || | || Sbjct 83736816 GTTGTTCAGTCTGATATGAAGCACTGGCCCTTCATGGTGGTGAATGATGCAGGCAGGCCC 83736757 Query 550280 TATATTGAAGCTACTCATGAAGGATCTGTTA-AACAATTTTCA--CCAGAACAAATTTCA 550336 | | ||| | |||| | | ||||| |||| ||||| || | || Sbjct 83736756 AAGGTCCAAGTGGAATACAAAGGG---GAGACAACAAGTTTCTACCCAGAGGAAGTGTCC 83736700 Query 550337 TCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAA-GTTAC 550395 || |||||| | | || ||||| ||| || || | | || |||| |||| Sbjct 83736699 TCCATGGTTCTGACAAAGATGAAGGAAATTGCAGAAGCGTACCTCGGA-AAGACTGTTAT 83736641 Query 550396 GGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGA 550455 |||| || | || || | || || || ||||||||| || || || || ||||| Sbjct 83736640 CAATGCTGTGGTCACAGTGTCGGCTTACTTCAATGACTCAG--CGACAGGCAACAAAAGA 83736583 Query 550456 TGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGC 550515 ||||||| ||||||||| || ||||| ||||| || ||||||||||| ||||||||||| Sbjct 83736582 TGCTGGAACTATTGCTGGCCTCAATGTACTTCGAATCATCAATGAACCAACTGCTGCTGC 83736523 Query 550516 ACTTGCATATGGACTTGATAAACATAATGATCAAGAACTTAATGTACTCATCTTTGATTG 550575 |||| |||| | ||||| | || ||| ||||| ||||| ||||| | Sbjct 83736522 TATTGCTAATGGCTTAGATAAGAAGGTTGGAGCTGAAAGGAATGTGCTCATTTTTGACTT 83736463 Query 550576 TGGAGGT 550582 |||||| Sbjct 83736462 GGGAGGT 83736456 >seq12 Length=182815943 Score = 122 bits (134), Expect = 7e-22 Identities = 350/532 (66%), Gaps = 6/532 (1%) Strand=Plus/Minus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 || || ||| | || ||||| || |||||| | ||| | | |||| || | ||| Sbjct 35443797 GGCATTGATCTTGGCACCACCTACTCTTGTGTGGATGTCTTCCTGCATGGAAATCTGGAA 35443738 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 || |||||||||| || |||||| | || || | |||||| ||||||| || || Sbjct 35443737 ATAATTGCCAATGTCCAGGGTAACTGCACCACACAGAGCTATGTTGCTTTCACTGACACA 35443678 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACTATT 550177 ||||| || |||| ||| | || |||| | | || | || || | | | Sbjct 35443677 GAACAAGTAATTGGGCATGTGACCAAGAATCAGGTTGCAAAGAACCTCACGAACAGT--T 35443620 Query 550178 TTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATATG 550237 |||||||||||| || | || || || ||| ||||| | ||||||| | |||||| Sbjct 35443619 TTTGATGCTAAATGTCTGATCAGACATAGGTTTGATGATGCTGTTGTTCAGTCTGATATG 35443560 Query 550238 AAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTACTCAT 550297 ||||| ||||| ||| | | |||| | | || | || | | ||| | | Sbjct 35443559 AAGCACTGGCCCTTCATGGTGCTAAATGATGCAGGCAGGCCCAAAGTCCAAGTTGAGTAC 35443500 Query 550298 GAAGGATCTGTTAAACAATTT-TCACCAGAACAAATTTCATCTATGGTTTTAATGAAAAT 550356 |||| | ||| | ||| | || ||| || || || |||||| | | || || Sbjct 35443499 AAAGGGAA-GACAAAAAGTTTCTAACTAGAGGAAGGGTCCTCAATGGTTCTGACAAAGAT 35443441 Query 550357 GAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAA-GTTACGGATGCAGTAATAACTGTAC 550415 |||| ||| | |||| |||| |||| ||||| |||| || | || || | Sbjct 35443440 GAAAGAAATTGTAGAAGCTTAGCTTGGA-AAGACTGTTACCAATGCTGTGGTCACAGTGC 35443382 Query 550416 CAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGAC 550475 || || || |||||||| || | || | || ||||||| | || |||| |||| | Sbjct 35443381 TAGTTTACTTCAATGACTCTCAGAGACAGGTAACAAAAGATGATAGAACTATTTCTGGCC 35443322 Query 550476 TTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGG 550527 | ||||| |||| |||||||||||||| ||||||||||| |||| ||||| Sbjct 35443321 TCAATGTACTTCAAATTATCAATGAACCAACTGCTGCTGCTATTGCTTATGG 35443270 Score = 87.8 bits (96), Expect = 1e-11 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450 ||||| ||||||| | ||||||||||| || || ||||| | || || ||||| || Sbjct 33141179 GTTACCCATGCAGTTGTTACTGTACCAGCTTACTTCAATGATGCCCAGCGGCAAGCAACC 33141238 Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACC 550503 ||||||||||| |||||||||||| ||||| | | || |||||||| || Sbjct 33141239 AAAGATGCTGGCACTATTGCTGGACTGAATGTCATGAGGATCATCAATGAGCC 33141291 >seq19 Length=126249303 Score = 120 bits (132), Expect = 2e-21 Identities = 114/146 (78%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450 ||||| |||| || | || || || || || || |||||||| || || || || || Sbjct 38907985 GTTACCAATGCTGTGGTCACAGTGCCGGCTTACTTCAATGACTCTCAGCGACAGGCAACA 38908044 Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510 |||||||||||| ||||||||| || ||||| ||||| || ||||||||||| |||||| Sbjct 38908045 AAAGATGCTGGAACTATTGCTGGCCTCAATGTACTTCGAATCATCAATGAACCAACTGCT 38908104 Query 550511 GCTGCACTTGCATATGGACTTGATAA 550536 ||||| |||| ||||| | ||||| Sbjct 38908105 GCTGCTATTGCTTATGGCTTAGATAA 38908130 Score = 87.8 bits (96), Expect = 1e-11 Identities = 132/186 (71%), Gaps = 4/186 (2%) Strand=Plus/Plus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 || || ||| | || ||||| || ||||| ||||| | || |||| || || ||| Sbjct 38907188 GGCATTGATCTCGGCACCACCTACTCCTGTGTGGGTGTCTTCCAGCATGGAAAGGTGGAA 38907247 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 |||||||||||||| || |||||| | || || || |||||| |||||||||| || Sbjct 38907248 ATTATTGCCAATGACCAGGGTAACCGCACCACGCCGAGCTATGTTGCTTTCACGGACACA 38907307 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCAAG--CCACTGGTAATCCTACCAATACTA 550175 || ||| |||| ||||| || || |||| | || || || || ||||| || Sbjct 38907308 GAGAGATTAATTGGGGATGCGGCCAAGAATCAGGTTGCAATG--AACCCCACCAACACAG 38907365 Query 550176 TTTTTG 550181 |||||| Sbjct 38907366 TTTTTG 38907371 >seq17 Length=136257712 Score = 86.0 bits (94), Expect = 5e-11 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 563266 ACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCA 563325 || |||||||||||| || || ||| ||||| |||| | ||| | |||||| Sbjct 39746518 ACCAGATGAAGGGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTCCGGCCATCTTCC 39746459 Query 563326 AGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGA 563385 || || || || ||||| || || || ||||||||||||||||||||||| ||||| || Sbjct 39746458 AGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCTGG 39746399 Query 563386 ATTTT 563390 || || Sbjct 39746398 ATCTT 39746394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029010212107960