Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20spretus_20[genbank_20GCA_5F001624865.1_202016-04-26] 5,404 sequences; 2,625,587,472 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq17 95.1 1e-14 >seq17 Length=136257712 Score = 95.1 bits (104), Expect = 1e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 75896 TCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGT 75955 || ||||||||||| || || ||||| ||||| ||||| ||| | |||||| |||||| Sbjct 91852589 TCCCAGACGGAGACCGGCACCCCATACATGCTCTACAAAGATTCCTGTAACCGGAAGAGC 91852648 Query 75956 AACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTAC 76015 ||||| |||| ||||||| || || || || || || || ||||| |||||||| Sbjct 91852649 AACCAGCAGAACCTGGGAACCATTAAATGCAGCAACCTGTGTACAGAAATAGTAGAGTAC 91852708 Query 76016 ACAGATAAGGATGAG 76030 || ||| |||||| Sbjct 91852709 ACCAGTAAAGATGAG 91852723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596529301723520