Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20spretus_20[genbank_20GCA_5F001624865.1_202016-04-26] 5,404 sequences; 2,625,587,472 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq3385 338 9e-88 seq17 275 9e-69 seq14 255 8e-63 seq4 111 2e-19 seq7 107 3e-18 seq3 102 1e-16 >seq3385 Length=62036 Score = 338 bits (374), Expect = 9e-88 Identities = 612/891 (69%), Gaps = 12/891 (1%) Strand=Plus/Minus Query 39313 CATAACTCCCATTTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTC 39372 ||| ||| | | | | || || ||| ||| |||||||| || ||||| ||||| ||||| Sbjct 20963 CATGACTGCAAATCTCTGATACTCAGAAACTCGTTTCTCAAAGAAATTTGTTTTCCCTTC 20904 Query 39373 CAATGATATATTTTCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCC 39432 ||||| || || ||||| |||||||| ||||| ||| | | | | ||| ||||| Sbjct 20903 TAATGAAATGTTCTCCATAAAATCAAAGGGATTTTCTGCCTGAAAAATCTTTGAGAATCC 20844 Query 39433 TAATTCTGAAATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATT 39492 | |||| || ||||| || || ||||| || ||||| |||| ||| || | || Sbjct 20843 AAGTTCTATAAGTAATCTGTCAGCTACAAACTCAATGTACTGTTTCGTCAAAACATAGTT 20784 Query 39493 CATTCCTATGAGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGC 39552 ||||| ||||| ||| || | || || |||| |||||| | || || | || || Sbjct 20783 AATTCCAATGAGGCCAACAGGCAAGGCTTCTGTTAAAAACTCCTGCTCAATTTGAACAGC 20724 Query 39553 CTCTGTTATTATCGATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACAT 39612 || | || || | ||| || || || | || | || |||||| Sbjct 20723 ATCAGCAATGATTTCCCTCACTCTGTCTTC------TGAAGGCTTGTACTG---AAACAT 20673 Query 39613 TAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGT 39672 | |||||| |||||||| || || || ||||| || || || | ||| || ||||| || Sbjct 20672 CAGGCAGGCAAAGTCACAGTGAAGACCTTCATCCCTGCTGATCAGTTCATTTGAAAAAGT 20613 Query 39673 GAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAA 39732 ||| ||||||| || || | ||| || ||||| ||||| |||||||| |||||||| || Sbjct 20612 CAGTTCAGGCATGAGGCCTCTCTTCTTTAGCCAGAATATTGCAGCAAATGATCCAGAGAA 20553 Query 39733 GAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTG-TATCAT-TA 39790 | | || ||||| || || ||||| || || | ||| || || || | | | || | | Sbjct 20552 GGAAATTCCTTCCACAGCAGCAAAGGCCACCACTCTTTCCCCAAAAGTAGATTTCCTATC 20493 Query 39791 TG-TATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGC 39849 || |||||| | | ||||| || ||||| ||||| ||| | ||||||||||| || || Sbjct 20492 TGCTATCCAGCGCAGAGCCCAGTCCGCTTTTTTCTTAACATATGGCATTGTTTCAATTGC 20433 Query 39850 ATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATA 39909 ||||| | | | | ||| | |||| | | || || ||||||| | ||| || Sbjct 20432 GTTAAATAAAAATTCCCTTTTCTTTGGATCTCTGATGTAAGTGTCTATTAGTAAACTGTA 20373 Query 39910 CATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGT 39969 ||| ||||| || | || || || |||||||| || || || || | || | Sbjct 20372 CATCTCTGAGTGAACATTCTCGATGAGAATCTGAAAGCCATAGAAGCAGTGAGTCTCCGG 20313 Query 39970 AATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGC 40029 || || ||||| || ||| | ||| |||| |||||||| || ||||||||||| || Sbjct 20312 AACCTGCACCTCCTGACTAAAACGCTCCACCAAGTTTTCATTTACAATTCCATCACTGGC 20253 Query 40030 GGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCA 40089 |||||||| || || | || ||||| || || || |||| | | | || ||||| Sbjct 20252 TGCAAAAAAGGCTAAGATGTGGGAGATAAAGTACTTCTCGTCGGATTTAAGCTTGTTCCA 20193 Query 40090 GTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTT 40149 || | || || ||||| | || || ||||| ||||||| || || ||| ||| | Sbjct 20192 GTGAGGGAGGTCCTTTGACAAGTCAACCTCTTCTTCTGTCCAGAAAGATGCCCGTGCTTG 20133 Query 40150 TTTGTACATGTTCCATATATCACGATATTGTATTGGAAAAATAACAAATCT 40200 || ||||| |||| |||||| |||| || |||||||| || ||||| || Sbjct 20132 CTTATACATTCTCCAGATATCAGGATACTGGATTGGAAAGATGACAAACCT 20082 >seq17 Length=136257712 Score = 275 bits (304), Expect = 9e-69 Identities = 633/943 (67%), Gaps = 33/943 (3%) Strand=Plus/Plus Query 39271 TTAAAAGTCAACATCTAAAGAAAAATGATTATCT-TCTTGT--GACATAACTCCCATTTT 39327 ||| |||||| ||| || | |||| ||| ||| || | ||||| |||||||| | Sbjct 93987351 TTAGAAGTCAGCATGCAAGGTAAAAGAATTCTCTGTCAAATTCGACATGACTCCCATCCT 93987410 Query 39328 TTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTC 39387 || || || || || | ||||| || || | ||||| ||||| | ||| |||||||| Sbjct 93987411 CTGATACTCGCCTACTTGCTTCTCAAAGAAGTCTGTTTTTCCTTCTAGTGAAATATTTTC 93987470 Query 39388 CATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTC---TGAAAT 39444 |||||| ||||| ||||| | | | | | || |||| || | || || || Sbjct 93987471 CATGAAGTCAAATGGATTTTCTACTCTGAAAATCTTCTTAACACCCAGCTCCAGTGGAAG 93987530 Query 39445 CAATCTATCTGC-AACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGA 39503 | || || || || |||||| ||||| ||||||| |||||| || | || Sbjct 93987531 C---CTGTCAGCCAAAAAATTCAATGTACTGCTTCATCAAAGTGCAATTCGCCCCGAAGA 93987587 Query 39504 GTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGT-TATT 39562 | || || || | ||||||||| |||||||| | | || || | | || | || Sbjct 93987588 GCTTCACAGGCAAAGCCTCCGTGAGAAACTCCTGCCCTATCCTAACAGTGTTGGTGTTTT 93987647 Query 39563 ATCGATGTTACTACCTCATC-ACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGC 39621 || | ||||| | || | | | | | || | | || || ||||| | ||||| Sbjct 93987648 ATTTCTTTTACTGTTTGCTCCAATGGCTTG-TGTACCAGGTGCTTGAACATCAGCCAGGC 93987706 Query 39622 GAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGG 39681 |||| || |||| ||||| ||||| ||||| || || || |||| ||| || || Sbjct 93987707 AGAGTCCCAGTGTAAACCCTCGTCTCTGCTAATAAACTCATTGGAAAGTGTAAGGCCCAA 93987766 Query 39682 CATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCC 39741 ||| || | || || |||||||| ||||| | ||||| ||||| || Sbjct 93987767 CATCAGTCTGCGATTCTTGAGCCAGAATATCGATGCAAA------------GAAGACTCC 93987814 Query 39742 TTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATGTA---TCCA 39798 ||| || || ||||| || |||| || ||||| || | || || | |||| Sbjct 93987815 TTCCACCGCAGCAAAGGCCACAACTCATTCTCCATATGAGGACTCTTTGTCCCCAGTCCA 93987874 Query 39799 CTTCTGTGCCCAATCAGCTTTCTTCTTT---ACACAAGGCATTGTTTCTATAGCATTAAA 39855 | ||||| ||||| |||||||| |||||||||||||||| |||||||| || Sbjct 93987875 ACGCAAGGCCCAGTCAGCCTTCTTCTTCTTCACACAAGGCATTGTTTAAATAGCATTGAA 93987934 Query 39856 GAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTC 39915 |||||| | | |||| | |||||||| || || || || | |||| |||||||| Sbjct 93987935 GAGATATTCTCTTTCCTTGGGATCTTTAATGTACGTGTCAATAAGGGGACTGTACATTTC 93987994 Query 39916 TGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTG 39975 || || |||||||| || || | || || || || ||||| | || || |||| ||| Sbjct 93987995 AGAGTGTATGTTTTCCATGGCAGTTTGGAAGCCATAGAAACAGCGGGCCTCTGTAACTTG 93988054 Query 39976 TACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAA 40035 || ||| | ||||| ||| |||| |||||||| ||||| |||||||| || ||||| Sbjct 93988055 AACTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTGACTATGCCATCACTCGCTGCAAA 93988114 Query 40036 AAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCATT 40095 || |||| | || ||||||| | | ||||| || ||| | ||||| | Sbjct 93988115 GAAAGCCAGAATGTGAGCTATAAAATGTCTCTCATCCAGTTTCAGAGCTTCCCAGTGTTG 93988174 Query 40096 GATATCTTTTGATATATCTA-CTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGT 40154 ||| | || || | || | |||||| || |||||||| || ||||| || || |||| Sbjct 93988175 AATACCCTTGGAAAGGTCCACCTTCTT-GGCAGTCCAAAAGGAGGCCTCAGCTTTCTTGT 93988233 Query 40155 ACATGTTCCATATATCACGATATTGTATTGGAAAAATAACAAA 40197 |||| | ||| |||||| | |||| || ||||| | |||||| Sbjct 93988234 ACATCTGCCAGATATCATGGTATTCAATGGGAAAGACAACAAA 93988276 Score = 118 bits (130), Expect = 1e-21 Identities = 106/133 (80%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 68719 TGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 68778 ||||||||||| || || ||||| |||||||| || ||||||||||| || || | || Sbjct 91856952 TGAAATTCCCCTGACAAGACTCTTCGAGTGTAGATGTTACTGGTATAAGGCTCAATGGAC 91856893 Query 68779 TCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTA 68838 |||||||| |||||||| || |||||||| ||||| ||||| || || | | |||||| Sbjct 91856892 TCATTATTCCCCAGAATCTGGGCAGTTGAAGCAGTAGGCATTGGGGCAATAAGTAAACTG 91856833 Query 68839 TTTCTAAGACCAT 68851 || || | ||||| Sbjct 91856832 TTCCTTATACCAT 91856820 Score = 105 bits (116), Expect = 9e-18 Identities = 126/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 68441 TCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATAT 68500 |||| |||||||| |||||||| || |||||| || | || || || ||||| || | Sbjct 91860047 TCCAACCGTAGAAGTGCATACTAGTGAGTTTGCCGTAGTTGGGCTCAGCAATATGGATGT 91859988 Query 68501 TCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCT 68560 | | || || || |||||||||||||| ||||| || || ||||| || | || | ||| Sbjct 91859987 TTAAAGACTGGCTCTGATCGATGAAAGCACCTCTCTCGGCTGCCATCTTGAGAACAGTCT 91859928 Query 68561 TTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAA 68611 | |||| |||||||| | |||||| | | || || | ||||| |||| Sbjct 91859927 TCTGAGAGATTTCCCACACGGTCTTATAGAGTTGCTTCAGGTCATCAGGAA 91859877 Score = 100 bits (110), Expect = 4e-16 Identities = 123/168 (73%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 70334 CACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAA 70393 |||| || | ||| |||||||| ||||| || || || | |||||| || ||||| || | Sbjct 91840174 CACTGAACACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACGGCTATCCTTGCTGCCAGGA 91840115 Query 70394 TAGCATAGTCAGGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCAGCTAACGTATCTA 70453 | ||||||||||| || | || || | || || ||| | || ||||| | || || | Sbjct 91840114 TGGCATAGTCAGGGTGCTTCGTGGTCAAGGTCGCGGCTGTCTCAGCAGCCAGGGTGTCCA 91840055 Query 70454 ATTCTATAGTTGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGG 70501 ||| | || || || || ||||||| ||||| || |||||||||| Sbjct 91840054 GTTCCACTGTGGTGACCCCACTATATAGGCCTTGGATTACTTTCATGG 91840007 Score = 95.1 bits (104), Expect = 2e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 69991 GTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTG 70050 || || ||||| || | |||||||| || ||||||||||| || |||||||| || ||| Sbjct 91844417 GTCCCAGCATTGAAGAGAGTAGGAGAGGCATGAGTGAACCACTTCTCAGAAAGTAGGTTG 91844358 Query 70051 TATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAAC 70110 || |||||||| || | || ||||| | ||||| || | | || | ||||||| Sbjct 91844357 TAGGTTTCAATTGCAGCATCAATATCTTCTTTGTGAATCCCCACAGAAACCCTCATCAAC 91844298 Query 70111 ATATGCTGAGGTCGTTC 70127 |||||||| |||| ||| Sbjct 91844297 ATATGCTGTGGTCTTTC 91844281 Score = 95.1 bits (104), Expect = 2e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 68947 GATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAAT 69006 ||||| | ||| |||||||| || || | || | ||||||||||| || || || | Sbjct 91853968 GATCCCTCATACGTTTCATAGGGGCCATACTCCTTGGCTAGTTCACAGCTGGCTTCCAGG 91853909 Query 69007 GCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCG 69066 || || || ||||| ||||| || |||| |||||| | || |||||| | || || Sbjct 91853908 GCTCCATAGTAAATGGTTTCAAAGATCTGCTTATTTAATAACTGGGCTTCTGGGCTCTCA 91853849 Query 69067 AATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGT 69126 || || || | || || || |||||||| || || || |||||||| || || || Sbjct 91853848 AAGGGGTATCTCATCAGGATGAAAGCATCTGCTAAACCTTGTACCCCAATTCCAATGGGA 91853789 Query 69127 CTATGTCTCTTATTTGA 69143 | ||| | |||||||| Sbjct 91853788 CGATGGCGTTTATTTGA 91853772 >seq14 Length=152946536 Score = 255 bits (282), Expect = 8e-63 Identities = 625/931 (67%), Gaps = 35/931 (4%) Strand=Plus/Plus Query 39271 TTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTG---TGACATAACTCCCATTTT 39327 |||||||||| || | || | |||| ||| | || | | | |||| || ||||| Sbjct 69609683 TTAAAAGTCAGCACCCAAGGTAAAAGAATTCT-TTGTGGAATTCACATGACGCCCATCCA 69609741 Query 39328 TTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTC 39387 || || || || || || ||||| || || || || || ||||| ||||| |||||||| Sbjct 69609742 CTGATACTCGCCTACTCGCTTCTCAAAGAAGTTTGTCTTTCCTTCTAATGAAATATTTTC 69609801 Query 39388 CATGAAATCAAACGGATTAGTTGCATT-ATAtttttttttAAATCCTAATTCTGAAATCA 39446 |||||| ||||| ||||| | | | | | || ||||| || | || || | Sbjct 69609802 CATGAAGTCAAATGGATTTCCTACTCCGAAAAATCTTGTTAAAACCCAGCTCCAGCATAA 69609861 Query 39447 ATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGTT 39506 ||||| || |||||||| ||||| ||||||| || ||||| | ||||| Sbjct 69609862 GCCTATCGGCCACAAATTCAATGTACTGCTTCATCAAAGTGCAGTTCATCTCGATGAGCA 69609921 Query 39507 TAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTA-CGGCCTCTGTTATTATC 39565 | || || | |||||| | || | | | | || || ||| | | | || ||||| Sbjct 69609922 TCACAGGCAAGGCCTCCATGAGGATCCCCTGCTCTATCCCTAACCTCGTTGGTGATTATT 69609981 Query 39566 GATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGAAG 39625 | ||||| | | || | | | | || | | || || ||||| | | || | ||| Sbjct 69609982 TCTTTTACT-CTGCTTCGATGGCTTG-TGTACCAGGTGCTTGAACATCAGGTAGACAAAG 69610039 Query 39626 TCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATT 39685 || || |||| |||| ||||| ||||| | || || |||||||| | || ||||| Sbjct 69610040 TCCCAGTGTAAACCCTAGTCTCTGCTAATAAGCTCATTGGAAAATGTAGGGCCCGGCATC 69610099 Query 39686 AGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAA-GAAGATGCCTTC 39744 || || | || |||||||| ||||| | |||||||| |||||||| |||||| |||| Sbjct 69610100 AGCCCCTGTTTCTTGAGCCAGAATATCGATGCAAAAGAACCAGAAAAAGAAGATTGCTTC 69610159 Query 39745 TACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCAT-TATGTATCCACTTCT 39803 ||| | ||||| || |||| || ||| | || |||| | | | ||| ||| | | Sbjct 69610160 TACCGTGGCAAAGGCCACAACTCGTTCTGCATA---TGTAACTTCTTTGTCCCCAGTCCA 69610216 Query 39804 GTGC-----CCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAG 39858 ||| ||| ||||| |||| |||| ||||||||||| |||||||| || || Sbjct 69610217 ATGCAAGGCCCAGTCAGCCTTCT------CACA-GGCATTGTTTCAATAGCATTGAAAAG 69610269 Query 39859 ATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGA 39918 ||| | | |||| | |||||||| || | || || | ||||| ||||||| || Sbjct 69610270 ATATTCTCTTTCTTTGGGATCTTTAATGTAAATGTCAATAAGGAGACTGTACATTTTAGA 69610329 Query 39919 ATGGATGTTTTCAATCGCCA-TCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTA 39977 || || |||| | |||| | | || || | |||||||| || || |||| ||| | Sbjct 69610330 GTGTATCCTTTCCCT-GCCAGTTTAGAAGCCAT-AAAACATCCAGCCTCTGTAACTTGAA 69610387 Query 39978 CCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAA 40037 | ||| | ||||| ||| |||| ||| | || | ||| |||||||| || ||||| | Sbjct 69610388 CTTCTTGGCTAAATCGCTCCACCAAGTTTGCGTTGAGTATGCCATCACTCGCTGCAAAGA 69610447 Query 40038 ATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCATTGA 40097 | |||| ||||| ||||||| | | |||| ||| | ||||| ||| Sbjct 69610448 AAGCCAGAACATGAGCTATAAAATTTCTGTCAT------TCAGAGCTTCCCAGT-GCTGA 69610500 Query 40098 TATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACA 40157 | || || || | || || || ||| | |||||||| | ||||| || || ||||||| Sbjct 69610501 TCTCCTTGGAAAGGTCCACCTCCTCATCAGTCCAAAAGGTGGCCTCAGCTTTCTTGTACA 69610560 Query 40158 TGTTCCATATATCACGATATTGTATTGGAAA 40188 | | ||| |||||| | || | || ||||| Sbjct 69610561 TCTGCCAGATATCATGGTACTAGATGGGAAA 69610591 >seq4 Length=114123490 Score = 111 bits (122), Expect = 2e-19 Identities = 100/126 (79%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 39639 CCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTT 39698 |||| ||||| ||||| | || || |||||||| || || ||||| || || || || | Sbjct 16582949 CCTCGTCTCTGCTAATAAGCTCATTGGAAAATGTAAGGCCCGGCATCAGCCCCCGTTTCT 16582890 Query 39699 TGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATG 39758 ||||||| ||||| | |||||||| || ||||||||||| |||||||| || ||||| | Sbjct 16582889 TGAGCCAGAATATTGATGCAAAAGAACCGGAAAAGAAGATTCCTTCTACGGCGGCAAAGG 16582830 Query 39759 CAACAA 39764 | |||| Sbjct 16582829 CCACAA 16582824 Score = 86.0 bits (94), Expect = 9e-12 Identities = 103/138 (75%), Gaps = 3/138 (2%) Strand=Plus/Minus Query 39271 TTAAAAGTCAACATCTAAAGAAAAATGATTATCT-TCTTGT--GACATAACTCCCATTTT 39327 ||| |||||| |||| || | |||| || ||| || | ||||| |||||||| | Sbjct 16584336 TTAGAAGTCAGCATCCAAGGTAAAAGAGTTCTCTGTCGAATTCGACATGACTCCCATCCT 16584277 Query 39328 TTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTC 39387 || || || || || || ||||| || || || || || ||||| | ||| |||||||| Sbjct 16584276 CTGATACTCGCCTACTCGCTTCTCAAAGAAGTTTGTCTTTCCTTCTAGTGAGATATTTTC 16584217 Query 39388 CATGAAATCAAACGGATT 39405 |||||| ||||||||||| Sbjct 16584216 CATGAAGTCAAACGGATT 16584199 Score = 86.0 bits (94), Expect = 9e-12 Identities = 103/138 (75%), Gaps = 3/138 (2%) Strand=Plus/Minus Query 39271 TTAAAAGTCAACATCTAAAGAAAAATGATTATCT-TCTTGT--GACATAACTCCCATTTT 39327 ||| |||||| |||| || | |||| || ||| || | ||||| |||||||| | Sbjct 16585149 TTAGAAGTCAGCATCCAAGGTAAAAGAGTTCTCTGTCGAATTCGACATGACTCCCATCCT 16585090 Query 39328 TTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTC 39387 || || || || || || ||||| || || || || || ||||| | ||| |||||||| Sbjct 16585089 CTGATACTCGCCTACTCGCTTCTCAAAGAAGTTTGTCTTTCCTTCTAGTGAGATATTTTC 16585030 Query 39388 CATGAAATCAAACGGATT 39405 |||||| ||||||||||| Sbjct 16585029 CATGAAGTCAAACGGATT 16585012 >seq7 Length=104786220 Score = 107 bits (118), Expect = 3e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 39641 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTG 39700 ||||| || || || | ||| || ||||| || ||||||||||| || || | ||| || Sbjct 35873931 TCATCCCTGCTGATCAGTTCATTTGAAAAAGTCAGTCCAGGCATGAGGCCTCTCTTCTTT 35873990 Query 39701 AGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCA 39760 ||||| ||||| |||||||| |||||||| ||||| || ||||| || || ||||| || Sbjct 35873991 AGCCAGAATATTGCAGCAAATGATCCAGAGAAGAAAATTCCTTCCACAGCAGCAAAGGCC 35874050 Query 39761 ACAAGTCTCTCTCC 39774 || | ||| || || Sbjct 35874051 ACCACTCTTTCCCC 35874064 >seq3 Length=125065471 Score = 102 bits (112), Expect = 1e-16 Identities = 190/277 (69%), Gaps = 8/277 (3%) Strand=Plus/Plus Query 172165 CTTTTGCTAATACAGAGGGTGGATTTTTGTTCATTGGGCTGGATGGAAATACACGTAAAG 172224 ||||| | || || || || |||| |||||||||||| ||||||| || || | || Sbjct 83590141 CTTTTACCAACACTGAAGGGGGATATTTGTTCATTGGTTTGGATGGCAAAACCCAGCAAA 83590200 Query 172225 TAATTGGATTCGATGCTGGACAAGAA-TATCTCGATATTATAGGTCGTGAGATAGAAAAG 172283 | ||||| || || || || ||||| |||||| || ||| |||| ||||||||| Sbjct 83590201 TTATTGGTTTTGAAGC-AGAGAAGAACGATCTCGTGCTTCTAGAGAGTGAAATAGAAAAG 83590259 Query 172284 CGTGTTAAAAGACTTCATGTTGTGCACTTTTGTGAGAAAAAAGAGGATATCAAATATGCA 172343 | | || || | ||| ||||| |||| ||| || ||| | || ||||| || Sbjct 83590260 TGCATCCAACAGCTGCCTGTCACTCACTTCTGTGGGAAGAAGGAGAAGATAAAATACACA 83590319 Query 172344 TATAGATTCATCAAGGTATATAAACCTGGTGATGAAAATACATCAACATATGTATGTGCT 172403 | | ||||||| | || | ||| | || | || | ||||||| ||||| Sbjct 83590320 TGCAAATTCATCGAAGTGCACAAATCCGGAGCTG------TGTGTGCATATGTGTGTGCG 83590373 Query 172404 ATCAAAGTGGAGAGATTTTGTTGTGCCGTGTTCACTG 172440 ||| |||||||||||| || ||||| |||||| ||| Sbjct 83590374 CTCAGAGTGGAGAGATTCTGCTGTGCAGTGTTCGCTG 83590410 Score = 87.8 bits (96), Expect = 2e-12 Identities = 196/292 (67%), Gaps = 8/292 (3%) Strand=Plus/Plus Query 172167 TTTGCTAATACAGAGGGTGGATTTTTGTTCATTGGGCTGGATGGAAATACACGTAAAGTA 172226 ||||| || || || || |||| |||||||||||| ||||||| || || | || | Sbjct 83528706 TTTGCAAACACTGATGGGGGATATTTGTTCATTGGCTTGGATGGCAAAACGCAGCAAATT 83528765 Query 172227 ATTGGATTCGATGCTGGACAAGA-ATATCTCGATATTATAGGTCGTGAGATAGAAAAGCG 172285 ||||| || || || || |||| |||||| || ||| |||| ||||||||| | Sbjct 83528766 ATTGGTTTTGAAGC-AGAGAAGAGCGATCTCGTGCTTCTAGAGAGTGAAATAGAAAAGTG 83528824 Query 172286 TGTTAAAAGACTTCATGTTGTGCACTTTTGTGAGAAAAAAGAGGATATCAAATATGCATA 172345 | || || | ||| ||||| |||||| | || ||| | ||||| || | | Sbjct 83528825 CATCCAACAGCTGCCTGTCACTCACTTCTGTGAGGAGAAGGAGAAGATCAAGTACACGTG 83528884 Query 172346 TAGATTCATCAAGGTATATAAACCTGGTGATGAAAATACATCAACATATGTATGTGCTAT 172405 | ||||||| | || | ||| | || | || | ||||||| || || || Sbjct 83528885 CAAATTCATCGAAGTGCACAAATCCGGAGCTG------TGTGTGCATATGTGTGCGCGAT 83528938 Query 172406 CAAAGTGGAGAGATTTTGTTGTGCCGTGTTCACTGATTATCCTGAATCGTGG 172457 || |||||||| || || ||||| |||||| ||| | ||||| || ||| Sbjct 83528939 CAGAGTGGAGAAGTTCTGCTGTGCAGTGTTCGCTGCAGAGCCTGAGTCCTGG 83528990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686862399310560