Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20spretus_20[genbank_20GCA_5F001624865.1_202016-04-26] 5,404 sequences; 2,625,587,472 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq3385 304 1e-77 seq17 233 2e-56 seq18 223 3e-53 seq14 194 1e-44 seq15 105 5e-18 seq7 105 5e-18 seq4 105 5e-18 >seq3385 Length=62036 Score = 304 bits (336), Expect = 1e-77 Identities = 637/944 (67%), Gaps = 28/944 (3%) Strand=Plus/Plus Query 43697 AGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAG 43756 ||||||||| | |||||||| || |||| ||| || ||| |||||| || |||||| | Sbjct 20082 AGGTTTGTCATCTTTCCAATCCAGTATCCTGATATCTGGAGAATGTATAAGCAAGCACGG 20141 Query 43757 GCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATT--G 43814 || || || ||||||| |||||| ||||| ||| | || ||| | | || |||| | Sbjct 20142 GCATCTTTCTGGACAGAAGAAGAGGTTGACTTGTCAAAGGACCTCCCTCACTGGAACAAG 20201 Query 43815 CATTAAAACC-ACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGC 43873 | ||||| || || |||| || ||||| || | || || |||||||| || || Sbjct 20202 C-TTAAATCCGACGAGAAGTAC--TTTATCTCCCACATCTTAGCCTTTTTTGCAGCCAGT 20258 Query 43874 GACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAA 43933 || || || || |||||||| ||||| || ||| || || || || | || || Sbjct 20259 GATGGAATTGTAAATGAAAACTTGGTGGAGCGTTTTAGTCAGGAGGTGCAGGTTCCGGAG 20318 Query 43934 GCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGT 43993 | | || || ||||| ||||| ||| ||| || ||| |||| || || ||||||||| Sbjct 20319 ACTCACTGCTTCTATGGCTTTCAGATTCTCATCGAGAATGTTCACTCAGAGATGTACAGT 20378 Query 43994 CTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGCATCGATTGTTTAATGCGATA 44053 | || ||||| || ||||||| |||| | | | | | || ||||| || || Sbjct 20379 TTACTAATAGACACTTACATCAGAGATCCAAAGAAAAGGGAATTTTTATTTAACGCAATT 20438 Query 44054 GAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAA---ATTCA 44110 |||||| | || |||| | ||||| |||||||| || |||||| || Sbjct 20439 GAAACAATGCCATATGTTAAGAAAAAAGCGGACTGGGCTCTGCGCTGGATAGCAGATAGG 20498 Query 44111 AATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCA 44170 || | ||||||| ||| || | || || ||||| | ||||||||| |||| ||| || Sbjct 20499 AAATCTACTTTTGGGGAAAGAGTGGTGGCCTTTGCTGCTGTGGAAGGAATTTCCTTCTCT 20558 Query 44171 GGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTT 44230 ||||| ||||| || ||||| ||| ||||||| |||| | ||||||| |||| ||| Sbjct 20559 GGATCATTTGCTGCAATATTCTGGCTAAAGAAGAGAGGCCTCATGCCTGAACTGACTTTT 20618 Query 44231 TCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTT 44290 |||||||| | || || | |||||||| | || || || ||||| ||| || | || Sbjct 20619 TCAAATGAACTGATCAGCAGGGATGAAGGTCTTCACTGTGACTTTGCCTGCCTGATGTTT 20678 Query 44291 GGATATCTAGGAGACGATAAGCCTTCATGTAAGAC--AATTACAGATATTGTTGTAGAGG 44348 | | ||||||||| ||||| | | | || || ||| || | Sbjct 20679 ------------CAGTACAAGCCTTCA--GAAGACAGAGTGAGGGAAATCATTGCTGATG 20724 Query 44349 CAGTAAAGATAGAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATAGGAATGA 44408 | || | || || || || ||| | ||| ||| || ||||| | || ||||| | Sbjct 20725 CTGTTCAAATTGAGCAGGAGTTTTTAACAGAAGCCTTGCCTGTTGGCCTCATTGGAATTA 20784 Query 44409 ATGAACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACTGG 44468 | | |||||| ||| || || ||||| | | || || | |||||| | ||||| | Sbjct 20785 ACTATGTTTTGACGAAACAGTACATTGAGTTTGTAGCTGACAGATTACTTATAGAACTTG 20844 Query 44469 GTTGCGATAAACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTGG 44528 | | | || | | | | |||| || |||||||||||||| || ||||| || | Sbjct 20845 GATTCTCAAAGATTTTTCAGGCAGAAAATCCCTTTGATTTTATGGAGAACATTTCATTAG 20904 Query 44529 AAGGCAAAACAAACTTTTTTGAAAAACGCGTTGGAGAATATCAGCGAATGGGCGTCAT-- 44586 |||| |||||||| || ||||| ||||| ||| || |||||| || | | ||||| Sbjct 20905 AAGGGAAAACAAATTTCTTTGAGAAACGAGTTTCTGAGTATCAGAGATTTGCAGTCATGG 20964 Query 44587 -GATAACAAGTGACAATAAATTTACTACGGATGAAGATTTCTAA 44629 | ||| | || ||| || || ||||| |||||||||| Sbjct 20965 CGGAAACCACCGATAATGTCTTCACCTTGGATGCAGATTTCTAA 21008 Score = 116 bits (128), Expect = 3e-21 Identities = 305/464 (66%), Gaps = 20/464 (4%) Strand=Plus/Plus Query 44171 GGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTT 44230 ||||| | |||| ||||| ||| ||||||| |||| | ||||||| |||| ||| Sbjct 21102 GGATC-TCTGCGTNAATATTCTGGCTAAAGAAGAGAGGCCTCATGCCTGAACTGACTTTT 21160 Query 44231 TCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTT 44290 |||||||| | || || | |||||||| | || || || ||||| ||| || | || Sbjct 21161 TCAAATGAACTGATCAGCAGGGATGAAGGTCTTCACTGTGACTTTGCCTGCCTGATGTTT 21220 Query 44291 GGATATCTAGGAGACGATAAGCCTTCATGTAAGACAA--TTACAGATATTGTTGTAGAGG 44348 || ||||||||| |||||| | | || || ||| || | Sbjct 21221 CAGTAC------------AAGCCTTCAG--AAGACAGAGTGAGGGAAATCATTGCTGATG 21266 Query 44349 CAGTAAAGATAGAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATAGGAATGA 44408 | || | || || || || ||| | ||| ||| || ||||| | || ||||| | Sbjct 21267 CTGTTCAAATTGAGCAGGAGTTTTTAACAGAAGCCTTGCCTGTTGGCCTCATTGGAATTA 21326 Query 44409 ATGAACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACTGG 44468 | | |||||| ||| || || ||||| | | || || | |||||| | ||||| | Sbjct 21327 ACTATGTTTTGACGAAACAGTACATTGAGTTTGTAGCTGACAGATTACTTATAGAACTTG 21386 Query 44469 GTTGCGATAAACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTGG 44528 | | | || | | | | |||| || |||||||||||||| || ||||| || | Sbjct 21387 GATTCTCAAAGATTTTTCAGGCAGAAAATCCCTTTGATTTTATGGAGAACATTTCATTAG 21446 Query 44529 AAGGCAAAACAAACTTTTTTGAAAAACGCGTTGGAGAATATCAGCGAATGGGCGTCAT-- 44586 |||| |||||||| || ||||| ||||| ||| || |||||| || | | ||||| Sbjct 21447 AAGGGAAAACAAATTTCTTTGAGAAACGAGTTTCTGAGTATCAGAGATTTGCAGTCATGG 21506 Query 44587 -GATAACAAGTGACAATAAATTTACTACGGATGAAGATTTCTAA 44629 | ||| | || ||| || || ||||| |||||||||| Sbjct 21507 CGGAAACCACCGATAATGTCTTCACCTTGGATGCAGATTTCTAA 21550 >seq17 Length=136257712 Score = 233 bits (258), Expect = 2e-56 Identities = 615/920 (67%), Gaps = 39/920 (4%) Strand=Plus/Minus Query 43684 AGAAAATCCGTCTAGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTA 43743 ||||||||| | | ||||| || ||||| ||| |||| ||||| || ||||| ||||| Sbjct 93988292 AGAAAATCCCTGCCGCTTTGTTGTCTTTCCCATTGAATACCATGATATCTGGCAGATGTA 93988233 Query 43744 CAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTG-ATTTGACTAAAGACTTAG 43802 ||| ||||| |||| || |||||||| || |||||| || | | | || | | Sbjct 93988232 CAAGAAAGCTGAGGCCTCCTTTTGGACTGCC-AAGAAGGTGGACCTTTCCAAGGGTATTC 93988174 Query 43803 CACATTGGATTGCATTAAAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTT 43862 ||| ||| || | |||| | || | |||||||||| || || |||| || | Sbjct 93988173 AACACTGGGAAGCTCTGAAACTGGATGAGAGACATTTTATAGCTCACATTCTGGCTTTCT 93988114 Query 43863 TTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTC 43922 |||| ||||| || || |||||||||||||| ||||| || ||| |||||||||| Sbjct 93988113 TTGCAGCGAGTGATGGCATAGTCAATGAAAACTTGGTGGAGCGATTTAGCCAAGAAGTTC 93988054 Query 43923 AATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGG 43982 || | |||| || || ||||| ||||| || |||| |||||| ||||| || || || | Sbjct 93988053 AAGTTACAGAGGCCCGCTGTTTCTATGGCTTCCAAACTGCCATGGAAAACATACACTCTG 93987994 Query 43983 AAATGTACAGTCTTCTGATAGATACGTACATCAAAGAT----GGGCACGAGAAGCATCGA 44038 |||||||||||| || || || |||||||| |||||| || | ||||| ||| Sbjct 93987993 AAATGTACAGTCCCCTTATTGACACGTACATTAAAGATCCCAAGGAAAGAGAA-TATC-- 93987937 Query 44039 TTGTTTAATGCGATAGAAACAGTACC---TGCGATTAAACATAAAGCAGACTGGGCCCTT 44095 | || ||||| || ||||| | || || || || | || || ||||||||| | Sbjct 93987936 -TCTTCAATGCTATTTAAACAATGCCTTGTGTGAAGAAGAAGAAGGCTGACTGGGCCTTG 93987878 Query 44096 AAATGGA-TAAATTCAAATGAT--TCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTG 44152 |||| | |||| | || | ||||||| || |||| || ||||| | ||| Sbjct 93987877 CGTTGGACTGGGGACAAAGAGTCCTCATATGGAGAATGAGTTGTGGCCTTTGCTGCGGTG 93987818 Query 44153 GAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTG 44212 ||||| | |||||| | |||| ||||| ||| | ||||| || | || Sbjct 93987817 GAAGGAGTCTTCTTT---GCATCG---------ATATTCTGGCTCAAGAATCGCAGACTG 93987770 Query 44213 ATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGAT 44272 ||| || | || |||| |||||||| || || | || || || ||||| || || Sbjct 93987769 ATGTTGGGCCTTACACTTTCCAATGAGTTTATTAGCAGAGACGAGGGTTTACACTGGGAC 93987710 Query 44273 TTTGCTTGCTTGTTACTTGGATATCTAGGAGACGATAAGCC-TTCATGTAAGACAATTAC 44331 | ||| || || | | | || | | || ||||| || | || ||| | | Sbjct 93987709 TCTGCCTGGCTGATGTTCAAGCACCTGGTACAC---AAGCCATTGGAGCAA-ACAGTAAA 93987654 Query 44332 AGATAT-TGTTGTAGAGGCAGTAAAGATAGAACAAGAATTTATGACAACAGCATTACCTG 44390 ||| || | | || | ||||| || || ||| | || || || |||| Sbjct 93987653 AGAAATAAAACACCAACACTGTTAGGATAGGGCAGGAGTTTCTCACGGAGGCTTTGCCTG 93987594 Query 44391 TAAATTTAATAGGAATGAA-TGAACTTTTGATGAACCAATATATTGAATACATT-GCAGA 44448 | || | | || ||| || || ||||||||| || || ||||||| || || || Sbjct 93987593 TGAAGCTCTTCGGGGCGAATTGCAC-TTTGATGAAGCAGTACATTGAATTTTTTGGCTGA 93987535 Query 44449 TCGTTTACTTTTGGAACTGGGTTGCGATAAACACTAT-ATTGTACAAAACCCGTTTGATT 44507 | | | |||| ||||| || | || | | | | ||| |||| || ||||| | Sbjct 93987534 CAGGCTTCCACTGGAGCTGGG-TGTTAAGAAGATTTTCAGAGTAGAAAATCCATTTGACT 93987476 Query 44508 TTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAAAACGCGTTGGAGAAT 44567 | |||||||||||||| | ||||| |||||| |||| ||||| || | || || || | Sbjct 93987475 TCATGGAAAATATTTCACTAGAAGGAAAAACAGACTTCTTTGAGAAGCAAGTAGGCGAGT 93987416 Query 44568 ATCAGCGAATGGGCGTCATG 44587 ||||| | ||||| |||||| Sbjct 93987415 ATCAGAGGATGGGAGTCATG 93987396 >seq18 Length=130317789 Score = 223 bits (246), Expect = 3e-53 Identities = 439/647 (68%), Gaps = 2/647 (0%) Strand=Plus/Plus Query 40672 GATACAATTTGAGAAATCAGTTTCCGTTGCTAACTACaaaaaaaaTGTTTTGGAAAGGCA 40731 |||||| ||||| || | ||||| |||| || || ||| | |||| ||||| || Sbjct 85150928 GATACAGCCTGAGAGATGAATTTCCTCTGCTCACAACCAAACGAGTGTTCTGGAAGGGTG 85150987 Query 40732 TTGCAGAAGAACTGTTATGGTTTATCAAAGGTTGTACTAATGCTAAGAAATTATCAGAAA 40791 || || || |||| ||||||||||| || | || |||||||| |||| || | Sbjct 85150988 TTTTGGAGGAGTTGTTGTGGTTTATCAAGGGATCCACAAATGCTAAAGAATTGTCCTCCA 85151047 Query 40792 GAGGAGTGCACATTTGGAATGCGCACAGTTCTAAAACATATTTGTCTAGCATAGGATTAC 40851 |||||| || ||| |||| | | || | | | || ||| | ||||| Sbjct 85151048 AGGGAGTGAGAATCTGGGATGCCAATGGATCCCGAGACTTTCTGGACAGCTTGGGATTTT 85151107 Query 40852 AAGATAGGGATGAAGGTGATCTTGGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAG 40911 | | | |||| || || || || |||||||| || || | | | |||||||||| Sbjct 85151108 CTGCCCGACAGAAAGGGGACCTGGGCCCAGTTTATGGTTTCCAATGGAGGCATTTTGGAG 85151167 Query 40912 CAAAATATGACACTATGTACTCTGATTATACCAATAAAGGAATGGATCAATTACAGTGCG 40971 || | || | |||| | || ||||| | ||||| | || || | || Sbjct 85151168 CAGAGTACAAAGATATGGATTCAGATTACCCGGGACAAGGAGTAGACCAGCTGCAAAAAA 85151227 Query 40972 TTATAGATACGATTAAATCCGATCCCGATAGCCGACGTATAATATTGTGCGCGTGGAACC 41031 | || || || || ||| || | || ||| | || | || || |||| || ||||||| Sbjct 85151228 TGATTGACACCATCAAAACCAACCCTGATGACAGAAGAATCATCATGTGTGCCTGGAACC 85151287 Query 41032 CAACGGACGTACATTTGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTT 41091 ||| || | | |||||||| |||| ||||| ||| | |||||||| || || Sbjct 85151288 CAAAAGATCTTCCCCTGATGGCACTGCCTCCTTGCCATGCCCTCTGTCAGTTCTATGTGG 85151347 Query 41092 GCAATGGTGAACTGTCATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCC 41151 ||||| || ||||| || ||| | || || || ||||| || ||||| || || || | Sbjct 85151348 TGAATGGGGAGCTGTCTTGCCAACTTTACCAGAGGTCAGGAGATATGGGTCTGGGCGTGC 85151407 Query 41152 CGTTTAACATAGCGAGTTATGCTCTGCTCACGTATATGATTGCACACGTTACCAATTTAA 41211 | || ||||| || || |||||||||||||| || ||||||||||| | || | | Sbjct 85151408 CTTTCAACATTGCCAGCTATGCTCTGCTCACCTACATGATTGCACATATCACAGGTCTGC 85151467 Query 41212 AACCTGGTGAATTTGTTCACACGTTAGGAGATGGACATATTTACATTAATCACATAGAGC 41271 | || ||||| ||||| ||||| || ||||||| |||||||||| | ||||| ||||||| Sbjct 85151468 AGCCAGGTGATTTTGTCCACACTTTGGGAGATGCACATATTTACCTGAATCATATAGAGC 85151527 Query 41272 CGTTAACAGAACAACTGACA-CGAAAACCTAGACCATTTCCAACGCT 41317 || | | | || || ||| ||| |||| ||||| || |||| ||| Sbjct 85151528 CGCTGAAAATTCAGCT-ACAGCGAGAACCAAGACCTTTCCCAAAGCT 85151573 >seq14 Length=152946536 Score = 194 bits (214), Expect = 1e-44 Identities = 591/895 (66%), Gaps = 40/895 (4%) Strand=Plus/Minus Query 43706 GTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTT 43765 || ||||| || | || ||||| || ||||| |||||||| ||||| |||| | ||| Sbjct 69610594 GTCTTTCCCATCTAGTACCATGATATCTGGCAGATGTACAAGAAAGCTGAGGCCACCTTT 69610535 Query 43766 TGGACAGCAGAAGAAGTTGATTTGACTAAAGACTT-AGCACATTGGATTGCATTAAAACC 43824 ||||| | || || || || | | || || | ||||| ||| || | || Sbjct 69610534 TGGACTGATGAGGAGGTGGACCTTTCCAAGGAGATCAGCAC--TGGGAAGCTCTGAATG- 69610478 Query 43825 ACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGT 43884 ||| |||| ||||||| || ||| |||| || ||||| ||||| || || ||| | Sbjct 69610477 ACA-GAAA----TTTTATAGCTCATGTTCTGGCTTTCTTTGCAGCGAGTGATGGCATACT 69610423 Query 43885 CAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTT 43944 ||| | ||| ||||| || ||| |||||||||||| | |||| || |||| || Sbjct 69610422 CAACGCAAACTTGGTGGAGCGATTTAGCCAAGAAGTTCAAGTTACAGAGGCTGGATG-TT 69610364 Query 43945 TTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGA 44004 |||||| || ||| || || |||| || || || ||||||||||||| || || || Sbjct 69610363 TTATGGCTTCTAAACTGGCAGGGAAAGGATACACTCTAAAATGTACAGTCTCCTTATTGA 69610304 Query 44005 TACGTACATCAAAGATGGGCACGAGA-AGCATCGATTGTTTAATGCGATAGAAACAGTAC 44063 | ||||| |||||| | || | || || || || ||||| || |||||| | | Sbjct 69610303 CATTTACATTAAAGATCCCAAAGAAAGAGAATATCTT-TTCAATGCTATTGAAACAATGC 69610245 Query 44064 CTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGA-TAAATTCAA--ATGATTCTT 44120 ||| | | || || ||||||||| | | |||| | ||| | | | | | Sbjct 69610244 CTGTG-------AGAAGGCTGACTGGGCCTTGCATTGGACTGGGGACAAAGAAGTTACAT 69610192 Query 44121 TTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTC-TTTTCAGGATCGTTT 44179 || ||||||| |||| || ||||| || |||| || ||| ||||| || || ||| Sbjct 69610191 ATGCAGAACGAGTTGTGGCCTTTGCCACGGTAGAAGCAATCTTCTTTTTCTGGTTCTTTT 69610132 Query 44180 GCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAG 44239 || | ||||| ||| | ||||||| || ||||||| || || ||||| |||||| Sbjct 69610131 GCATCGATATTCTGGCTCAAGAAACAGGGGCTGATGCCGGGCCCTACATTTTCCAATGAG 69610072 Query 44240 TTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTTGGATATCTA 44299 | || || | || | || ||||| || || |||| | | || | | | || Sbjct 69610071 CTTATTAGCAGAGACTAGGGTTTACACTGGGACTTTGTCTACCTGATGTTCAAGCACCTG 69610012 Query 44300 GGAGACGATAAGCCTTCATGTAAGACAATTACAGATATTGTTGTA-GAGGCAGTAAAGAT 44358 | | || ||||| || ||| | | | ||| | | |||| || ||| Sbjct 69610011 GTACAC---AAGCCATCGAAGCAGAGTAAAAGAAATAATCACCAACGAGG--TTAGGGAT 69609957 Query 44359 AGAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATAGGAATGAA-TGAACTTT 44417 ||| || | | | | || || ||||| | | || | ||||| || || || Sbjct 69609956 AGAGCAGGGGATCCTCATGGAGGCCTTGCCTGTGATGCTCATCGAGATGAACTGCAC-TT 69609898 Query 44418 TGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACTGGGTTGCGATA 44477 ||||||| || || ||||||| | || ||| | | | |||| ||||||| | Sbjct 69609897 TGATGAAGCAGTACATTGAATTTGTGGCCGATAGGCTTATGCTGGAGCTGGGTT----TT 69609842 Query 44478 AACACTATATT-----GTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGG 44532 |||| || || ||| ||| || ||||| || |||||||||||||| || ||||| Sbjct 69609841 AACAAGATTTTTCGGAGTAGGAAATCCATTTGACTTCATGGAAAATATTTCATTAGAAGG 69609782 Query 44533 CAAAACAAACTTTTTTGAAAAACGCGTTGGAGAATATCAGCGAATGGGCGTCATG 44587 || |||||||| ||||| || || || || || |||||| | |||||||||||| Sbjct 69609781 AAAGACAAACTTCTTTGAGAAGCGAGTAGGCGAGTATCAGTGGATGGGCGTCATG 69609727 >seq15 Length=152823684 Score = 105 bits (116), Expect = 5e-18 Identities = 114/151 (75%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 41047 TGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCAATGGTGAACTGT 41106 |||||||| |||| ||||| ||| | |||||||| || || ||||| || |||| Sbjct 27100267 TGATGGCACTGCCTCCTTGCCATGCCCTCTGTCAGTTCTATGTGGTGAATGGGGAGCTGT 27100208 Query 41107 CATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAGCGA 41166 | || || | || || || ||||| || ||||| || || || || || ||||| || | Sbjct 27100207 CTTGCCAGCTTTACCAGAGGTCAGGAGATATGGGTCTGGGCGTGCCTTTCAACATTGCCA 27100148 Query 41167 GTTATGCTCTGCTCACGTATATGATTGCACA 41197 | |||||||||||||| || ||||||||||| Sbjct 27100147 GCTATGCTCTGCTCACCTACATGATTGCACA 27100117 >seq7 Length=104786220 Score = 105 bits (116), Expect = 5e-18 Identities = 105/136 (77%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 44123 GGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCG 44182 || ||| || | || || ||||| | ||||||||| |||||||| || ||||| ||||| Sbjct 35874064 GGGGAAAGAGTGGTGGCCTTTGCTGCTGTGGAAGGAATTTTCTTCTCTGGATCATTTGCT 35874005 Query 44183 GCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTA 44242 || ||||| ||| ||||||| |||| | |||||||| |||| ||||||||||| | Sbjct 35874004 GCAATATTCTGGCTAAAGAAGAGAGGCCTCATGCCTGGACTGACTTTTTCAAATGAACTG 35873945 Query 44243 ATAAGTCGTGATGAAG 44258 || || | ||||||| Sbjct 35873944 ATCAGCAGGGATGAAG 35873929 Score = 89.7 bits (98), Expect = 4e-13 Identities = 104/140 (74%), Gaps = 3/140 (2%) Strand=Plus/Minus Query 44493 AAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAA 44552 |||| || |||||||||||||| || ||||| || ||||| |||||||| || ||||| | Sbjct 35863497 AAAATCCCTTTGATTTTATGGAGAACATTTCATTAGAAGGGAAAACAAATTTCTTTGAGA 35863438 Query 44553 AACGCGTTGGAGAATATCAGCGAATGGGCGTCATG---ATAACAAGTGACAATAAATTTA 44609 |||| ||| || ||||||||| | | |||||| ||| | || ||| || | Sbjct 35863437 AACGAGTTTCTGAGTATCAGCGATTTGCAGTCATGGCCGAAACCACAGATAATGTCTTCA 35863378 Query 44610 CTACGGATGAAGATTTCTAA 44629 | ||||| |||||||||| Sbjct 35863377 CCTTGGATGCAGATTTCTAA 35863358 Score = 89.7 bits (98), Expect = 4e-13 Identities = 104/140 (74%), Gaps = 3/140 (2%) Strand=Plus/Minus Query 44493 AAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAA 44552 |||| || |||||||||||||| || ||||| || ||||| |||||||| || ||||| | Sbjct 35863829 AAAATCCCTTTGATTTTATGGAGAACATTTCATTAGAAGGGAAAACAAATTTCTTTGAGA 35863770 Query 44553 AACGCGTTGGAGAATATCAGCGAATGGGCGTCATG---ATAACAAGTGACAATAAATTTA 44609 |||| ||| || ||||||||| | | |||||| ||| | || ||| || | Sbjct 35863769 AACGAGTTTCTGAGTATCAGCGATTTGCAGTCATGGCCGAAACCACAGATAATGTCTTCA 35863710 Query 44610 CTACGGATGAAGATTTCTAA 44629 | ||||| |||||||||| Sbjct 35863709 CCTTGGATGCAGATTTCTAA 35863690 >seq4 Length=114123490 Score = 105 bits (116), Expect = 5e-18 Identities = 88/108 (81%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 43913 CAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAAT 43972 |||||||||||| | |||| || || ||||| ||||| || ||||||||||| ||||| Sbjct 16581536 CAAGAAGTTCAAGTTACAGAGGCCCGCTGTTTCTATGGCTTCCAAATTGCCATGGAAAAC 16581595 Query 43973 ATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGAT 44020 || || || |||||||||||||| || || || || ||||| |||||| Sbjct 16581596 ATACACTCTGAAATGTACAGTCTCCTTATTGACACTTACATTAAAGAT 16581643 Score = 89.7 bits (98), Expect = 4e-13 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 44489 GTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTT 44548 ||| |||| |||||||| || ||||||||||| || | ||||| || |||||||| ||| Sbjct 16584193 GTAGAAAATCCGTTTGACTTCATGGAAAATATCTCACTAGAAGGAAAGACAAACTTCTTT 16584252 Query 44549 GAAAAACGCGTTGGAGAATATCAGCGAATGGGCGTCATG 44587 || || || || || || |||||| | ||||| |||||| Sbjct 16584253 GAGAAGCGAGTAGGCGAGTATCAGAGGATGGGAGTCATG 16584291 Score = 89.7 bits (98), Expect = 4e-13 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 44489 GTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTT 44548 ||| |||| |||||||| || ||||||||||| || | ||||| || |||||||| ||| Sbjct 16585006 GTAGAAAATCCGTTTGACTTCATGGAAAATATCTCACTAGAAGGAAAGACAAACTTCTTT 16585065 Query 44549 GAAAAACGCGTTGGAGAATATCAGCGAATGGGCGTCATG 44587 || || || || || || |||||| | ||||| |||||| Sbjct 16585066 GAGAAGCGAGTAGGCGAGTATCAGAGGATGGGAGTCATG 16585104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397429823051020