Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mus_20spretus_20[genbank_20GCA_5F001624865.1_202016-04-26]
5,404 sequences; 2,625,587,472 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq17 149 7e-31
seq8 141 1e-28
seq15 140 4e-28
seq3 136 5e-27
seq12 131 2e-25
seq5 127 2e-24
seq18 120 3e-22
seq16 118 1e-21
seq10 118 1e-21
seq6 116 4e-21
seq14 113 5e-20
seq20 111 2e-19
seq11 102 9e-17
seq7 91.5 2e-13
seq3385 86.0 7e-12
>seq17
Length=136257712
Score = 149 bits (164), Expect = 7e-31
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||| ||| ||||| ||||| || || || || || || |||||||| |
Sbjct 39746310 ATGCAGATCTCTGTGAAGACCCTTACGGGGAAAACCATCACGCTAGAGGTTGAACCCTCG 39746369
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | |||| | ||||| || || ||||| ||||| ||||||||||| || |||
Sbjct 39746370 GACACTATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 39746429
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | || || |||||||||||||| || || |||| || || | | ||||| ||
Sbjct 39746430 CAGAGGCTGATCTTTGCTGGTAAGCAGCTGGAAGATGGCCGGACTTTGTCTGACTACAAC 39746489
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| |||||||| || || |||||||| || ||| | ||||| |||||
Sbjct 39746490 ATTCAAAAGGAGTCTACCCTTCATCTGGTGTTGAGACTTCGGGGTGG 39746536
>seq8
Length=97876770
Score = 141 bits (156), Expect = 1e-28
Identities = 170/230 (74%), Gaps = 1/230 (0%)
Strand=Plus/Plus
Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462
|| ||||| || ||||| ||||| |||| || ||||| || || || |||||||| |
Sbjct 13844309 ATGATGCAGATTTTTGTGAAGACCCTTATGGGGAAGACCATCACGCTCGAGGTTGAACCC 13844368
Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522
|| | ||| | |||| | ||||| || || ||||| ||||| ||||||||||| ||
Sbjct 13844369 CTGGACACCATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 13844428
Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582
|||||| | || | |||||||||||||| || || |||| | || | | |||||
Sbjct 13844429 CAGCAGAGGCTGGTCTTTGCTGGTAAGCAGCTGGAAGATGGCCATA-CTTGTTTGACTAC 13844487
Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|| | |||||||| ||||| |||||||| || ||| | |||| |||||
Sbjct 13844488 AACATTCAAAAGGAGTCCACCCTTCATCTTGTGTTGAGCCTTCTTGGTGG 13844537
Score = 86.0 bits (94), Expect = 7e-12
Identities = 117/162 (72%), Gaps = 1/162 (1%)
Strand=Plus/Plus
Query 27448 CTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAG 27507
|| |||||||| | || | ||| | |||| | ||| | || || ||||| |||||
Sbjct 13420358 CTCGAGGTTGAACCCCTGGACACCATAGAAAATGTAAAGTCCAAGATCCAGGATAAGGAA 13420417
Query 27508 GGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGT 27567
||| ||||||| || |||||| | || | |||||||||||||| || || |||| | |
Sbjct 13420418 GGACTTCCTCCTGATCAGCAGAGGCTGGTCTTTGCTGGTAAGCAGCTGGAAGATGGCCAT 13420477
Query 27568 ACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609
| | | ||||| || | |||||||| ||||| ||||||
Sbjct 13420478 A-CTTGTTTGACTACAACATTCAAAAGGAGTCCACCCTTCAT 13420518
>seq15
Length=152823684
Score = 140 bits (154), Expect = 4e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| || || | || || ||||| || || || ||||| ||| | ||
Sbjct 125085171 ATGCAGATCTTTGTGAAAACCTTAACTGGTAAGACCATCACCCTGGAGGTCGAGCCCAGT 125085112
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| ||| | ||||| || || |||||||||||||| || || || ||||||
Sbjct 125085111 GACACCATTGAGAATGTCAAGGCAAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 125085052
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | || || ||||| || ||||| || || |||| || ||||| |||| || ||
Sbjct 125085051 CAGAGGCTGATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCAGATTACAAC 125084992
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| || || ||||| || || || ||| | || || | |||||
Sbjct 125084991 ATCCAGAAAGAGTCCACCCTGCACCTGGTCCTTCGCCTCAGAGGTGG 125084945
>seq3
Length=125065471
Score = 136 bits (150), Expect = 5e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| ||||| || ||||| || ||||||||||| || || || ||||| ||| | |
Sbjct 62144446 AATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAG 62144505
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||| | ||| | || ||||||| || || ||||| || ||||| || || || |||||
Sbjct 62144506 TGACACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAAGAGGGCATCCCCCCTGACCA 62144565
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|||| | || || ||||| || ||||| || || |||| || ||||| | || || ||
Sbjct 62144566 GCAGAGGCTGATCTTTGCGGGCAAGCAGCTAGAAGATGGCCGCACCCTCTCTGATTACAA 62144625
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| || || || || || || || ||| | ||||| | |||||
Sbjct 62144626 CATCCAGAAAGAGTCGACCCTGCACCTGGTCCTCCGTCTGAGGGGTGG 62144673
Score = 134 bits (148), Expect = 2e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || ||||| || | |||||||| || ||||||||||| ||| | ||
Sbjct 98064818 ATGCAGATCTTCGTGAAGACCCTGATGGGCAAGACCATCACTCTTGAGGTAGAGCCCAGT 98064759
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | ||| | ||||| || || || ||||||||||| | || || ||||||
Sbjct 98064758 GACACCATCGAGAATGTAAAGGCCAAGATCCAAGACAAGGAGGGCCTCCCACCTGACCAG 98064699
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | || || || || || || || || ||||||| | ||||| | || || ||
Sbjct 98064698 CAGAGGCTGATATTCGCCGGCAAACAGCTAGAGGATGGCCACACCCTGTCTGATTACAAC 98064639
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| || || ||||| | || || || |||||||||| |||||
Sbjct 98064638 ATCCAGAAAGAGTCCACCTTGCACCTGGTGCTGCGTCTTCGAGGTGG 98064592
Score = 86.0 bits (94), Expect = 7e-12
Identities = 124/175 (71%), Gaps = 0/175 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || ||||| || || | |||||| || ||||||||||| || | ||
Sbjct 60138676 ATGCAGATCTTCGTGAAGACCCTGACAGACAAGACCATCACTCTTGAGGTCAAGCCCAGT 60138617
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| ||| | |||| || || || |||| || || || || || ||||||
Sbjct 60138616 GACACCATCAAGAATGTCAAGGACAAGATCCAAGACAGTGAAGGCATCCCACCTGACCAG 60138557
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACT 27580
||| | || | || | |||||| | || ||||||| | |||||| | ||||
Sbjct 60138556 CAGAGGCTGGTATTCGATGGTAAAAAGCTGGAGGATGGCTGCACCCTATCTGACT 60138502
>seq12
Length=182815943
Score = 131 bits (144), Expect = 2e-25
Identities = 167/230 (73%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462
|| ||||| || ||||| ||||| ||||| || || || || || || |||||||| |
Sbjct 146741782 ATGATGCAGATTTTTGTGAAGACCCTTACGGGGAAAACCATCACGCTGGAGGTTGAACCC 146741723
Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522
| || | || | |||| | |||| || | ||||| ||||| ||||||||||| ||
Sbjct 146741722 TGGGACACTATAGAAAATGTAAAGGTCAAGACCCAGGATAAGGAAGGAATTCCTCCTGAT 146741663
Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582
|||||| | || || ||||||||||||| | | |||| || || | |||||
Sbjct 146741662 CAGCAGAGGCTGATCTTTGCTGGTAAGCCTCCGAAAGATGGCCGGACTTT----GACTAC 146741607
Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|| | |||||||| ||||| |||||||| || ||| | ||||| |||||
Sbjct 146741606 AACATTCAAAAGGAGTCCACCCTTCATCTGGTGTTGAGACTTCGTGGTGG 146741557
Score = 87.8 bits (96), Expect = 2e-12
Identities = 113/156 (72%), Gaps = 4/156 (3%)
Strand=Plus/Plus
Query 27477 AAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAAT 27536
|||| | ||||| || || ||| | ||| | ||||||||||| || |||||| | | ||
Sbjct 92361832 AAATGTAAAGGCCAAGATCCAGAATAAGAAAGGAATTCCTCCTGATCAGCAGAGGTTGAT 92361891
Query 27537 TTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGA 27596
| |||||| ||||| || || |||| | ||| | ||||| || | ||||||||
Sbjct 92361892 CTGTGCTGGCAAGCAGCTGGAAGATGGCCATACTTT----GACTACAACATTCAAAAGGA 92361947
Query 27597 ATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|| || ||||| || || ||| | ||||| |||||
Sbjct 92361948 GTCTACCCTTCAACTCGTGTTGAGACTTCGTGGTGG 92361983
Score = 86.0 bits (94), Expect = 7e-12
Identities = 134/190 (71%), Gaps = 5/190 (3%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||||||||| | ||||| || ||| |||||| || || || || || ||| | |
Sbjct 121887299 AATGCAAATCTTCGAGAAGACCCTGACCAACAAGACCATCACCCTAGATGTGGAGCCCAG 121887358
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGG----ACAAGGAGGGAATTCCTCCAG 27520
||| | ||| | || ||||||| || || |||| | || ||||| ||||| || |
Sbjct 121887359 TGACACCATCGAGAACGTGAAGGC-AAGATCCAGGATAAAGAAAGAGGGCATTCCCCCTG 121887417
Query 27521 ACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACT 27580
||||||| | || || ||||| || ||||| || || |||| | ||||| | || |
Sbjct 121887418 ACCAGCAAAGGCTCATCTTTGCAGGAAAGCAGCTAGAAGATGGCTGCACCCTCTCTGATT 121887477
Query 27581 ATAATGTCCA 27590
| || ||||
Sbjct 121887478 ACAACATCCA 121887487
>seq5
Length=117181667
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 4/228 (2%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| || ||||| ||||| ||||| || || ||| | || || |||||||| | |
Sbjct 9091818 AATGCAGATTTTTGTGAAGACCCTTACAGGGAAAACTGTCACGCTCGAGGTTGAACCCTG 9091759
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|| | | | |||| | ||||| || | ||||| ||||| ||| ||||||| | ||
Sbjct 9091758 GGACACTACAGAAAATATAAAGGCCAAGACCCAGGATAAGGAAGGACTTCCTCCTCATCA 9091699
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|||| | || | |||||||||||||| || || |||| || || | ||||| ||
Sbjct 9091698 GCAGAGGCTGGTCTTTGCTGGTAAGCAGCTGGAAGATGGCCGGACTTT----GACTACAA 9091643
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| |||| ||| ||||| |||||||| || ||| | ||||| |||||
Sbjct 9091642 CATTCAAAGGGAGTCCACCCTTCATCTGGTGTTGAGACTTCGGGGTGG 9091595
>seq18
Length=130317789
Score = 120 bits (132), Expect = 3e-22
Identities = 143/194 (74%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 27439 ACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAG 27498
|| || || ||||||||||| | || | || | |||| | ||||| || || |||
Sbjct 111279852 ACCATCACGCTTGAGGTTGAACCCTCGGACACTATAGAAAATGTAAAGGCCAAGATCCAG 111279793
Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558
|| ||||| ||||||||||| || |||||| | || | |||||||||||||| || ||
Sbjct 111279792 GATAAGGAAGGAATTCCTCCTGATCAGCAGAGGCTGGTCTTTGCTGGTAAGCAGCTGGAA 111279733
Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
|||| || || | | ||||| || | |||||||| ||||| |||||| | || |||
Sbjct 111279732 GATGGCCGGACTTTGTCTGACTACAACATTCAAAAGGAGTCCACCCTTCATTTGGTGTTG 111279673
Query 27619 CGTCTTCGCGGTGG 27632
| ||||| |||||
Sbjct 111279672 AGACTTCGGGGTGG 111279659
Score = 84.2 bits (92), Expect = 2e-11
Identities = 81/104 (78%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || ||||| || || |||||||| || ||||||||||||||| | ||
Sbjct 68987849 ATGCAGATCTTCGTAAAGACCCTGACGGGCAAGACCATCACTCTTGAGGTTGAGCCCAGT 68987790
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509
|| | ||| | ||| | ||||| || || || |||||||| ||
Sbjct 68987789 GACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAGGAAGG 68987746
>seq16
Length=150978388
Score = 118 bits (130), Expect = 1e-21
Identities = 121/158 (77%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| |||||| | ||||| || ||||||||||| || || || ||||| ||| | |
Sbjct 58879552 AATGCAGATCTTTCTGAAGACCCTGACCGGCAAGACCATCACCCTAGAGGTGGAGCCCAG 58879493
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||| | ||| | || ||||||| || || ||||| || ||||| ||||| || ||||
Sbjct 58879492 TGACACCATAGAGAACGTGAAGGCCAAGATCCAGGATAAAGAGGGCATTCCCCCTTACCA 58879433
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATG 27562
|||| | || || |||||||| ||||| || || ||||
Sbjct 58879432 GCAGAGGCTGATCTTTGCTGGCAAGCAGCTAGAAGATG 58879395
Score = 116 bits (128), Expect = 4e-21
Identities = 162/227 (71%), Gaps = 5/227 (2%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || ||||| ||||| ||||| || || || || || || ||||||| |
Sbjct 3200247 ATGCAGATTTTTGTGAAGACCCTTACGGGGAAAACCATCACACTCCAGGTTGAACCCTCA 3200188
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| || | |||| | ||||| || || ||||| ||| | ||||||| || |||
Sbjct 3200187 GACTCTATAGAAAATGTAAAGGCCAAGATCCAGGATAAG-----ACTTCCTCCTGATCAG 3200133
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | || | |||||||||||||| || || |||| || || | | ||||| ||
Sbjct 3200132 CAGAGGCTGGTCTTTGCTGGTAAGCAGCTGGAAGATGGACGGACTTTGTCTGACTACAAC 3200073
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| |||||||| ||||| |||||||| || ||| | ||||| |||||
Sbjct 3200072 ATTCAAAAGGAGTCCACCCTTCATCTGGTGTTGAGACTTCGGGGTGG 3200026
>seq10
Length=90668104
Score = 118 bits (130), Expect = 1e-21
Identities = 148/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 27421 AAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAAT 27480
||||| || || |||||||| || ||||||||||| ||| | |||| | ||| | |||
Sbjct 33660661 AAGACCCTGACGGGCAAGACCATCACTCTTGAGGTCGAGCCCAGTGACACCATCGAGAAT 33660602
Query 27481 TTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTT 27540
| ||||| || || || |||||||| || || ||||| ||||||||| | || || ||
Sbjct 33660601 GTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCTGACCAGCAGAGGCTGATATTC 33660542
Query 27541 GCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCC 27600
| || || || || ||||||| || ||||| | ||||| || |||| || || |||
Sbjct 33660541 TCGGGCAAACAGCTGGAGGATGGCCGCACCCTGTCCGACTACAACATCCAGAAAGAGTCC 33660482
Query 27601 ACTCTTCATCTAGTCTTGCGTCT 27623
|| | || || || |||| ||
Sbjct 33660481 ACCTTGCACCTGGTGCTGCGCCT 33660459
>seq6
Length=117542938
Score = 116 bits (128), Expect = 4e-21
Identities = 160/227 (70%), Gaps = 14/227 (6%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || ||||| ||||| ||||| || || || || || || |
Sbjct 35538952 ATGCAGATTTTTGTGAAGACCCTTACAGGGAAAACCATCACCCTCG-------------- 35538907
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | |||| | ||||| || | ||||| ||||| | | ||||||| || |||
Sbjct 35538906 GACACTATAGAAAATGTAAAGGCCAAGACCCAGGATAAGGAAGAACTTCCTCCTGATCAG 35538847
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | || || |||||||||||||| || || |||| ||||| | | ||||| ||
Sbjct 35538846 CAGAGGCTGATCTTTGCTGGTAAGCAGCTGGAAGATGGCCGTACTTTGTCTGACTACAAC 35538787
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| |||||||| ||||| |||||||| || ||| | ||||| |||||
Sbjct 35538786 ATTCAAAAGGAGTCCACCCTTCATCTGGTGTTGAGACTTCGAGGTGG 35538740
>seq14
Length=152946536
Score = 113 bits (124), Expect = 5e-20
Identities = 165/233 (71%), Gaps = 3/233 (1%)
Strand=Plus/Minus
Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462
|| ||||| || ||||| ||||| |||| || ||| | || || || |||||||| |
Sbjct 131977214 ATGATGCAGATTTTTGTGAAGACCCTTATGGGGAAGGCCATCACGCTCGAGGTTGAACCC 131977155
Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522
|| | || | |||| | ||||| || | ||||| ||||| ||| ||||||| ||
Sbjct 131977154 TCGGACACTATAGTAAATGTAAAGGCCAAGACCCAGGATAAGGAAGGACTTCCTCCTGAT 131977095
Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582
|||||| | | | ||||||||||||| || || |||| || || | | |||||
Sbjct 131977094 CAGCAGAGGTTGACCTTTGCTGGTAAGCCGCTGGAAGATGGCCGGACTTTGTCTGACTAC 131977035
Query 27583 AATGTCCAAAAGGAATCCAC---TCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|| | |||| ||||||||| |||||| || || ||| | |||| |||||
Sbjct 131977034 AACATTCAAAGGGAATCCACCCTTCTTCACCTTGTGTTGAGACTTCATGGTGG 131976982
Score = 111 bits (122), Expect = 2e-19
Identities = 165/232 (71%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGC-AAGACTATTACTCTTGAGGTTGAGTCAG 27463
|||||| |||||||| ||||| |||| || || || || || || |||||||| |
Sbjct 128583840 AATGCAGATCTTTGTGAAGACCCTTATGGGGGAAAACCATCACGCTCGAGGTTGAACCCT 128583781
Query 27464 GTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523
|| | || | |||| | ||||| || | ||||| ||||| | | ||||||| || |
Sbjct 128583780 CGGACACTATAGAAAATGTAAAGGCCAAGACCCAGGATAAGGAAGAACTTCCTCCTGATC 128583721
Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583
||||| | | | |||||||||||||| || || |||| || || | | ||||| |
Sbjct 128583720 AGCAGAGGTTGACCTTTGCTGGTAAGCAGCTGGAAGATGGCCGGACTTTGTCTGACTACA 128583661
Query 27584 ATGTCCAAAAGGAATCCAC---TCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| | |||| ||| ||||| |||||| || || ||| | ||||| |||||
Sbjct 128583660 ACATTCAAAGGGAGTCCACCCTTCTTCACCTTGTGTTGAGACTTCGTGGTGG 128583609
>seq20
Length=148322235
Score = 111 bits (122), Expect = 2e-19
Identities = 152/211 (72%), Gaps = 1/211 (0%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||||||||| | ||||| || || |||||||| || || || ||| | ||| | |
Sbjct 135500554 AATGCAAATCTTCGAGAAGACCCTGACTGGCAAGACCATCACCCTAGAGATGGAGCCCAG 135500495
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||| | ||| | ||| ||||||| || || ||||| || ||||| | || || |||||
Sbjct 135500494 TGAAACCATCGAGAATGTGAAGGCCAAGATCCAGGATAAAGAGGGCA-TCACCCCGACCA 135500436
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|||| | || || ||||| || |||||||| || |||| || ||| | | || || ||
Sbjct 135500435 GCAGAGGCTCATCTTTGCAGGCAAGCAACTGGAAGATGGCCGCACCTTCTCTGATTACAA 135500376
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTC 27615
|||| || || | || || || || |||
Sbjct 135500375 CATCCAGAAAGAGTTGACCCTGCACCTGGTC 135500345
Score = 104 bits (114), Expect = 3e-17
Identities = 139/192 (72%), Gaps = 1/192 (1%)
Strand=Plus/Plus
Query 27400 ACTATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAG 27459
|||| ||||| ||||| | |||| || || |||||||| |||| |||||||||||||
Sbjct 130962508 ACTAACATGCAGATCTTCATGAAGAGCCTGACAGGCAAGACCATTAGTCTTGAGGTTGAG 130962567
Query 27460 TCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCA 27519
|||| | ||| | ||| | ||||| || ||||| ||| |||| || || | |
Sbjct 130962568 CACAGTGACACCATCGAGAATGTCAAGGCCAAGATTCAAGACTAGGAAGGCATCTCACAT 130962627
Query 27520 GACCAGCAGCGTCTAAT-TTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGA 27578
||| ||||| | || || |||||| | || |||| ||||||| ||| |||||| | |
Sbjct 130962628 GACTAGCAGAGGCTGATAATTTGCTAGCTAGAAACTGGAGGATGGTCGCACCCTATCCAA 130962687
Query 27579 CTATAATGTCCA 27590
||| || ||||
Sbjct 130962688 CTACAACATCCA 130962699
>seq11
Length=59623150
Score = 102 bits (112), Expect = 9e-17
Identities = 156/221 (71%), Gaps = 1/221 (0%)
Strand=Plus/Plus
Query 27412 ATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGC 27471
|| |||| ||||| || | || || || || || || |||||||| | || |
Sbjct 13412068 ATTTTTGAGAAGACCCTAATGGGGAAAACCATCACGCTCGAGGTTGAACCCTCGGACACT 13412127
Query 27472 ATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGT 27531
|| | |||| | |||| || | ||||||||||| ||||||| ||| | |||||| |
Sbjct 13412128 ATAGAAAATGTAAAGGTCAAGACCCAGGACAAGGAAGGAATTCTTCCTCATCAGCAGAGG 13412187
Query 27532 CTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAA 27591
|| | |||||||||||| | || || |||| || || | | ||||| || | |||
Sbjct 13412188 CTGGTCTTTGCTGGTAAG-AGCTGGAAGATGGCCGGACTTTGTCTGACTACAACATTCAA 13412246
Query 27592 AAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
||||| || || |||||||| || ||| | ||||| |||||
Sbjct 13412247 AAGGAGTCTACCCTTCATCTGGTGTTGAGACTTCGGGGTGG 13412287
Score = 102 bits (112), Expect = 9e-17
Identities = 156/221 (71%), Gaps = 1/221 (0%)
Strand=Plus/Plus
Query 27412 ATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGC 27471
|| |||| ||||| || | || || || || || || |||||||| | || |
Sbjct 13413019 ATTTTTGAGAAGACCCTAATGGGGAAAACCATCACGCTCGAGGTTGAACCCTCGGACACT 13413078
Query 27472 ATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGT 27531
|| | |||| | |||| || | ||||||||||| ||||||| ||| | |||||| |
Sbjct 13413079 ATAGAAAATGTAAAGGTCAAGACCCAGGACAAGGAAGGAATTCTTCCTCATCAGCAGAGG 13413138
Query 27532 CTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAA 27591
|| | |||||||||||| | || || |||| || || | | ||||| || | |||
Sbjct 13413139 CTGGTCTTTGCTGGTAAG-AGCTGGAAGATGGCCGGACTTTGTCTGACTACAACATTCAA 13413197
Query 27592 AAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
||||| || || |||||||| || ||| | ||||| |||||
Sbjct 13413198 AAGGAGTCTACCCTTCATCTGGTGTTGAGACTTCGGGGTGG 13413238
>seq7
Length=104786220
Score = 91.5 bits (100), Expect = 2e-13
Identities = 85/108 (79%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 64726 GCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTA 64785
|| ||||| |||||||||||||||||| ||||| ||||| | | || |||||||||
Sbjct 35874049 GCCTTTGCTGCTGTGGAAGGAATTTTCTTCTCTGGATCATTTGCTGCAATATTCTGGCTA 35873990
Query 64786 AAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATC 64833
|| ||| | ||||| ||||| || ||| | ||||| || || ||||||
Sbjct 35873989 AAGAAGAGAGGCCTCATGCCTGGACTGACTTTTTCAAATGAACTGATC 35873942
>seq3385
Length=62036
Score = 86.0 bits (94), Expect = 7e-12
Identities = 103/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 64726 GCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTA 64785
|| ||||| |||||||||||||| ||| ||||| ||||| | | || |||||||||
Sbjct 20526 GCCTTTGCTGCTGTGGAAGGAATTTCCTTCTCTGGATCATTTGCTGCAATATTCTGGCTA 20585
Query 64786 AAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAG 64845
|| ||| | ||||| ||||| | ||| | ||||| || || |||||| |||| ||
Sbjct 20586 AAGAAGAGAGGCCTCATGCCTGAACTGACTTTTTCAAATGAACTGATCAGCAGGGATGAA 20645
Query 64846 GGGCTCCACCAAGAATTTGC 64865
|| || ||| || |||||
Sbjct 20646 GGTCTTCACTGTGACTTTGC 20665
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570271875532480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |