Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20spretus_20[genbank_20GCA_5F001624865.1_202016-04-26] 5,404 sequences; 2,625,587,472 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq17 149 7e-31 seq8 141 1e-28 seq15 140 4e-28 seq3 136 5e-27 seq12 131 2e-25 seq5 127 2e-24 seq18 120 3e-22 seq16 118 1e-21 seq10 118 1e-21 seq6 116 4e-21 seq14 113 5e-20 seq20 111 2e-19 seq11 102 9e-17 seq7 91.5 2e-13 seq3385 86.0 7e-12 >seq17 Length=136257712 Score = 149 bits (164), Expect = 7e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||| ||| ||||| ||||| || || || || || || |||||||| | Sbjct 39746310 ATGCAGATCTCTGTGAAGACCCTTACGGGGAAAACCATCACGCTAGAGGTTGAACCCTCG 39746369 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | |||| | ||||| || || ||||| ||||| ||||||||||| || ||| Sbjct 39746370 GACACTATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 39746429 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || |||||||||||||| || || |||| || || | | ||||| || Sbjct 39746430 CAGAGGCTGATCTTTGCTGGTAAGCAGCTGGAAGATGGCCGGACTTTGTCTGACTACAAC 39746489 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||||||| || || |||||||| || ||| | ||||| ||||| Sbjct 39746490 ATTCAAAAGGAGTCTACCCTTCATCTGGTGTTGAGACTTCGGGGTGG 39746536 >seq8 Length=97876770 Score = 141 bits (156), Expect = 1e-28 Identities = 170/230 (74%), Gaps = 1/230 (0%) Strand=Plus/Plus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || ||||| || ||||| ||||| |||| || ||||| || || || |||||||| | Sbjct 13844309 ATGATGCAGATTTTTGTGAAGACCCTTATGGGGAAGACCATCACGCTCGAGGTTGAACCC 13844368 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 || | ||| | |||| | ||||| || || ||||| ||||| ||||||||||| || Sbjct 13844369 CTGGACACCATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 13844428 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 |||||| | || | |||||||||||||| || || |||| | || | | ||||| Sbjct 13844429 CAGCAGAGGCTGGTCTTTGCTGGTAAGCAGCTGGAAGATGGCCATA-CTTGTTTGACTAC 13844487 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || | |||||||| ||||| |||||||| || ||| | |||| ||||| Sbjct 13844488 AACATTCAAAAGGAGTCCACCCTTCATCTTGTGTTGAGCCTTCTTGGTGG 13844537 Score = 86.0 bits (94), Expect = 7e-12 Identities = 117/162 (72%), Gaps = 1/162 (1%) Strand=Plus/Plus Query 27448 CTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAG 27507 || |||||||| | || | ||| | |||| | ||| | || || ||||| ||||| Sbjct 13420358 CTCGAGGTTGAACCCCTGGACACCATAGAAAATGTAAAGTCCAAGATCCAGGATAAGGAA 13420417 Query 27508 GGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGT 27567 ||| ||||||| || |||||| | || | |||||||||||||| || || |||| | | Sbjct 13420418 GGACTTCCTCCTGATCAGCAGAGGCTGGTCTTTGCTGGTAAGCAGCTGGAAGATGGCCAT 13420477 Query 27568 ACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 | | | ||||| || | |||||||| ||||| |||||| Sbjct 13420478 A-CTTGTTTGACTACAACATTCAAAAGGAGTCCACCCTTCAT 13420518 >seq15 Length=152823684 Score = 140 bits (154), Expect = 4e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| || || | || || ||||| || || || ||||| ||| | || Sbjct 125085171 ATGCAGATCTTTGTGAAAACCTTAACTGGTAAGACCATCACCCTGGAGGTCGAGCCCAGT 125085112 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| ||| | ||||| || || |||||||||||||| || || || |||||| Sbjct 125085111 GACACCATTGAGAATGTCAAGGCAAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 125085052 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || ||||| || ||||| || || |||| || ||||| |||| || || Sbjct 125085051 CAGAGGCTGATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCAGATTACAAC 125084992 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || || ||||| || || || ||| | || || | ||||| Sbjct 125084991 ATCCAGAAAGAGTCCACCCTGCACCTGGTCCTTCGCCTCAGAGGTGG 125084945 >seq3 Length=125065471 Score = 136 bits (150), Expect = 5e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| ||||| || ||||| || ||||||||||| || || || ||||| ||| | | Sbjct 62144446 AATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAG 62144505 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | ||| | || ||||||| || || ||||| || ||||| || || || ||||| Sbjct 62144506 TGACACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAAGAGGGCATCCCCCCTGACCA 62144565 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 |||| | || || ||||| || ||||| || || |||| || ||||| | || || || Sbjct 62144566 GCAGAGGCTGATCTTTGCGGGCAAGCAGCTAGAAGATGGCCGCACCCTCTCTGATTACAA 62144625 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || || || || || || || ||| | ||||| | ||||| Sbjct 62144626 CATCCAGAAAGAGTCGACCCTGCACCTGGTCCTCCGTCTGAGGGGTGG 62144673 Score = 134 bits (148), Expect = 2e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| || | |||||||| || ||||||||||| ||| | || Sbjct 98064818 ATGCAGATCTTCGTGAAGACCCTGATGGGCAAGACCATCACTCTTGAGGTAGAGCCCAGT 98064759 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | ||||| || || || ||||||||||| | || || |||||| Sbjct 98064758 GACACCATCGAGAATGTAAAGGCCAAGATCCAAGACAAGGAGGGCCTCCCACCTGACCAG 98064699 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || || || || || || || ||||||| | ||||| | || || || Sbjct 98064698 CAGAGGCTGATATTCGCCGGCAAACAGCTAGAGGATGGCCACACCCTGTCTGATTACAAC 98064639 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || || ||||| | || || || |||||||||| ||||| Sbjct 98064638 ATCCAGAAAGAGTCCACCTTGCACCTGGTGCTGCGTCTTCGAGGTGG 98064592 Score = 86.0 bits (94), Expect = 7e-12 Identities = 124/175 (71%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| || || | |||||| || ||||||||||| || | || Sbjct 60138676 ATGCAGATCTTCGTGAAGACCCTGACAGACAAGACCATCACTCTTGAGGTCAAGCCCAGT 60138617 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| ||| | |||| || || || |||| || || || || || |||||| Sbjct 60138616 GACACCATCAAGAATGTCAAGGACAAGATCCAAGACAGTGAAGGCATCCCACCTGACCAG 60138557 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACT 27580 ||| | || | || | |||||| | || ||||||| | |||||| | |||| Sbjct 60138556 CAGAGGCTGGTATTCGATGGTAAAAAGCTGGAGGATGGCTGCACCCTATCTGACT 60138502 >seq12 Length=182815943 Score = 131 bits (144), Expect = 2e-25 Identities = 167/230 (73%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || ||||| || ||||| ||||| ||||| || || || || || || |||||||| | Sbjct 146741782 ATGATGCAGATTTTTGTGAAGACCCTTACGGGGAAAACCATCACGCTGGAGGTTGAACCC 146741723 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 | || | || | |||| | |||| || | ||||| ||||| ||||||||||| || Sbjct 146741722 TGGGACACTATAGAAAATGTAAAGGTCAAGACCCAGGATAAGGAAGGAATTCCTCCTGAT 146741663 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 |||||| | || || ||||||||||||| | | |||| || || | ||||| Sbjct 146741662 CAGCAGAGGCTGATCTTTGCTGGTAAGCCTCCGAAAGATGGCCGGACTTT----GACTAC 146741607 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || | |||||||| ||||| |||||||| || ||| | ||||| ||||| Sbjct 146741606 AACATTCAAAAGGAGTCCACCCTTCATCTGGTGTTGAGACTTCGTGGTGG 146741557 Score = 87.8 bits (96), Expect = 2e-12 Identities = 113/156 (72%), Gaps = 4/156 (3%) Strand=Plus/Plus Query 27477 AAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAAT 27536 |||| | ||||| || || ||| | ||| | ||||||||||| || |||||| | | || Sbjct 92361832 AAATGTAAAGGCCAAGATCCAGAATAAGAAAGGAATTCCTCCTGATCAGCAGAGGTTGAT 92361891 Query 27537 TTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGA 27596 | |||||| ||||| || || |||| | ||| | ||||| || | |||||||| Sbjct 92361892 CTGTGCTGGCAAGCAGCTGGAAGATGGCCATACTTT----GACTACAACATTCAAAAGGA 92361947 Query 27597 ATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || || ||||| || || ||| | ||||| ||||| Sbjct 92361948 GTCTACCCTTCAACTCGTGTTGAGACTTCGTGGTGG 92361983 Score = 86.0 bits (94), Expect = 7e-12 Identities = 134/190 (71%), Gaps = 5/190 (3%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||||||||| | ||||| || ||| |||||| || || || || || ||| | | Sbjct 121887299 AATGCAAATCTTCGAGAAGACCCTGACCAACAAGACCATCACCCTAGATGTGGAGCCCAG 121887358 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGG----ACAAGGAGGGAATTCCTCCAG 27520 ||| | ||| | || ||||||| || || |||| | || ||||| ||||| || | Sbjct 121887359 TGACACCATCGAGAACGTGAAGGC-AAGATCCAGGATAAAGAAAGAGGGCATTCCCCCTG 121887417 Query 27521 ACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACT 27580 ||||||| | || || ||||| || ||||| || || |||| | ||||| | || | Sbjct 121887418 ACCAGCAAAGGCTCATCTTTGCAGGAAAGCAGCTAGAAGATGGCTGCACCCTCTCTGATT 121887477 Query 27581 ATAATGTCCA 27590 | || |||| Sbjct 121887478 ACAACATCCA 121887487 >seq5 Length=117181667 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 4/228 (2%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || ||||| ||||| ||||| || || ||| | || || |||||||| | | Sbjct 9091818 AATGCAGATTTTTGTGAAGACCCTTACAGGGAAAACTGTCACGCTCGAGGTTGAACCCTG 9091759 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | | | |||| | ||||| || | ||||| ||||| ||| ||||||| | || Sbjct 9091758 GGACACTACAGAAAATATAAAGGCCAAGACCCAGGATAAGGAAGGACTTCCTCCTCATCA 9091699 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 |||| | || | |||||||||||||| || || |||| || || | ||||| || Sbjct 9091698 GCAGAGGCTGGTCTTTGCTGGTAAGCAGCTGGAAGATGGCCGGACTTT----GACTACAA 9091643 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||| ||| ||||| |||||||| || ||| | ||||| ||||| Sbjct 9091642 CATTCAAAGGGAGTCCACCCTTCATCTGGTGTTGAGACTTCGGGGTGG 9091595 >seq18 Length=130317789 Score = 120 bits (132), Expect = 3e-22 Identities = 143/194 (74%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 27439 ACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAG 27498 || || || ||||||||||| | || | || | |||| | ||||| || || ||| Sbjct 111279852 ACCATCACGCTTGAGGTTGAACCCTCGGACACTATAGAAAATGTAAAGGCCAAGATCCAG 111279793 Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558 || ||||| ||||||||||| || |||||| | || | |||||||||||||| || || Sbjct 111279792 GATAAGGAAGGAATTCCTCCTGATCAGCAGAGGCTGGTCTTTGCTGGTAAGCAGCTGGAA 111279733 Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 |||| || || | | ||||| || | |||||||| ||||| |||||| | || ||| Sbjct 111279732 GATGGCCGGACTTTGTCTGACTACAACATTCAAAAGGAGTCCACCCTTCATTTGGTGTTG 111279673 Query 27619 CGTCTTCGCGGTGG 27632 | ||||| ||||| Sbjct 111279672 AGACTTCGGGGTGG 111279659 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| || || |||||||| || ||||||||||||||| | || Sbjct 68987849 ATGCAGATCTTCGTAAAGACCCTGACGGGCAAGACCATCACTCTTGAGGTTGAGCCCAGT 68987790 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509 || | ||| | ||| | ||||| || || || |||||||| || Sbjct 68987789 GACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAGGAAGG 68987746 >seq16 Length=150978388 Score = 118 bits (130), Expect = 1e-21 Identities = 121/158 (77%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| |||||| | ||||| || ||||||||||| || || || ||||| ||| | | Sbjct 58879552 AATGCAGATCTTTCTGAAGACCCTGACCGGCAAGACCATCACCCTAGAGGTGGAGCCCAG 58879493 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | ||| | || ||||||| || || ||||| || ||||| ||||| || |||| Sbjct 58879492 TGACACCATAGAGAACGTGAAGGCCAAGATCCAGGATAAAGAGGGCATTCCCCCTTACCA 58879433 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATG 27562 |||| | || || |||||||| ||||| || || |||| Sbjct 58879432 GCAGAGGCTGATCTTTGCTGGCAAGCAGCTAGAAGATG 58879395 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 5/227 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| ||||| ||||| || || || || || || ||||||| | Sbjct 3200247 ATGCAGATTTTTGTGAAGACCCTTACGGGGAAAACCATCACACTCCAGGTTGAACCCTCA 3200188 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || || | |||| | ||||| || || ||||| ||| | ||||||| || ||| Sbjct 3200187 GACTCTATAGAAAATGTAAAGGCCAAGATCCAGGATAAG-----ACTTCCTCCTGATCAG 3200133 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || | |||||||||||||| || || |||| || || | | ||||| || Sbjct 3200132 CAGAGGCTGGTCTTTGCTGGTAAGCAGCTGGAAGATGGACGGACTTTGTCTGACTACAAC 3200073 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||||||| ||||| |||||||| || ||| | ||||| ||||| Sbjct 3200072 ATTCAAAAGGAGTCCACCCTTCATCTGGTGTTGAGACTTCGGGGTGG 3200026 >seq10 Length=90668104 Score = 118 bits (130), Expect = 1e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 27421 AAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAAT 27480 ||||| || || |||||||| || ||||||||||| ||| | |||| | ||| | ||| Sbjct 33660661 AAGACCCTGACGGGCAAGACCATCACTCTTGAGGTCGAGCCCAGTGACACCATCGAGAAT 33660602 Query 27481 TTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTT 27540 | ||||| || || || |||||||| || || ||||| ||||||||| | || || || Sbjct 33660601 GTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCTGACCAGCAGAGGCTGATATTC 33660542 Query 27541 GCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCC 27600 | || || || || ||||||| || ||||| | ||||| || |||| || || ||| Sbjct 33660541 TCGGGCAAACAGCTGGAGGATGGCCGCACCCTGTCCGACTACAACATCCAGAAAGAGTCC 33660482 Query 27601 ACTCTTCATCTAGTCTTGCGTCT 27623 || | || || || |||| || Sbjct 33660481 ACCTTGCACCTGGTGCTGCGCCT 33660459 >seq6 Length=117542938 Score = 116 bits (128), Expect = 4e-21 Identities = 160/227 (70%), Gaps = 14/227 (6%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| ||||| ||||| || || || || || || | Sbjct 35538952 ATGCAGATTTTTGTGAAGACCCTTACAGGGAAAACCATCACCCTCG-------------- 35538907 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | |||| | ||||| || | ||||| ||||| | | ||||||| || ||| Sbjct 35538906 GACACTATAGAAAATGTAAAGGCCAAGACCCAGGATAAGGAAGAACTTCCTCCTGATCAG 35538847 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || |||||||||||||| || || |||| ||||| | | ||||| || Sbjct 35538846 CAGAGGCTGATCTTTGCTGGTAAGCAGCTGGAAGATGGCCGTACTTTGTCTGACTACAAC 35538787 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||||||| ||||| |||||||| || ||| | ||||| ||||| Sbjct 35538786 ATTCAAAAGGAGTCCACCCTTCATCTGGTGTTGAGACTTCGAGGTGG 35538740 >seq14 Length=152946536 Score = 113 bits (124), Expect = 5e-20 Identities = 165/233 (71%), Gaps = 3/233 (1%) Strand=Plus/Minus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || ||||| || ||||| ||||| |||| || ||| | || || || |||||||| | Sbjct 131977214 ATGATGCAGATTTTTGTGAAGACCCTTATGGGGAAGGCCATCACGCTCGAGGTTGAACCC 131977155 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 || | || | |||| | ||||| || | ||||| ||||| ||| ||||||| || Sbjct 131977154 TCGGACACTATAGTAAATGTAAAGGCCAAGACCCAGGATAAGGAAGGACTTCCTCCTGAT 131977095 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 |||||| | | | ||||||||||||| || || |||| || || | | ||||| Sbjct 131977094 CAGCAGAGGTTGACCTTTGCTGGTAAGCCGCTGGAAGATGGCCGGACTTTGTCTGACTAC 131977035 Query 27583 AATGTCCAAAAGGAATCCAC---TCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || | |||| ||||||||| |||||| || || ||| | |||| ||||| Sbjct 131977034 AACATTCAAAGGGAATCCACCCTTCTTCACCTTGTGTTGAGACTTCATGGTGG 131976982 Score = 111 bits (122), Expect = 2e-19 Identities = 165/232 (71%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGC-AAGACTATTACTCTTGAGGTTGAGTCAG 27463 |||||| |||||||| ||||| |||| || || || || || || |||||||| | Sbjct 128583840 AATGCAGATCTTTGTGAAGACCCTTATGGGGGAAAACCATCACGCTCGAGGTTGAACCCT 128583781 Query 27464 GTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | || | |||| | ||||| || | ||||| ||||| | | ||||||| || | Sbjct 128583780 CGGACACTATAGAAAATGTAAAGGCCAAGACCCAGGATAAGGAAGAACTTCCTCCTGATC 128583721 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||| | | | |||||||||||||| || || |||| || || | | ||||| | Sbjct 128583720 AGCAGAGGTTGACCTTTGCTGGTAAGCAGCTGGAAGATGGCCGGACTTTGTCTGACTACA 128583661 Query 27584 ATGTCCAAAAGGAATCCAC---TCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | | |||| ||| ||||| |||||| || || ||| | ||||| ||||| Sbjct 128583660 ACATTCAAAGGGAGTCCACCCTTCTTCACCTTGTGTTGAGACTTCGTGGTGG 128583609 >seq20 Length=148322235 Score = 111 bits (122), Expect = 2e-19 Identities = 152/211 (72%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||||||||| | ||||| || || |||||||| || || || ||| | ||| | | Sbjct 135500554 AATGCAAATCTTCGAGAAGACCCTGACTGGCAAGACCATCACCCTAGAGATGGAGCCCAG 135500495 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | ||| | ||| ||||||| || || ||||| || ||||| | || || ||||| Sbjct 135500494 TGAAACCATCGAGAATGTGAAGGCCAAGATCCAGGATAAAGAGGGCA-TCACCCCGACCA 135500436 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 |||| | || || ||||| || |||||||| || |||| || ||| | | || || || Sbjct 135500435 GCAGAGGCTCATCTTTGCAGGCAAGCAACTGGAAGATGGCCGCACCTTCTCTGATTACAA 135500376 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTC 27615 |||| || || | || || || || ||| Sbjct 135500375 CATCCAGAAAGAGTTGACCCTGCACCTGGTC 135500345 Score = 104 bits (114), Expect = 3e-17 Identities = 139/192 (72%), Gaps = 1/192 (1%) Strand=Plus/Plus Query 27400 ACTATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAG 27459 |||| ||||| ||||| | |||| || || |||||||| |||| ||||||||||||| Sbjct 130962508 ACTAACATGCAGATCTTCATGAAGAGCCTGACAGGCAAGACCATTAGTCTTGAGGTTGAG 130962567 Query 27460 TCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCA 27519 |||| | ||| | ||| | ||||| || ||||| ||| |||| || || | | Sbjct 130962568 CACAGTGACACCATCGAGAATGTCAAGGCCAAGATTCAAGACTAGGAAGGCATCTCACAT 130962627 Query 27520 GACCAGCAGCGTCTAAT-TTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGA 27578 ||| ||||| | || || |||||| | || |||| ||||||| ||| |||||| | | Sbjct 130962628 GACTAGCAGAGGCTGATAATTTGCTAGCTAGAAACTGGAGGATGGTCGCACCCTATCCAA 130962687 Query 27579 CTATAATGTCCA 27590 ||| || |||| Sbjct 130962688 CTACAACATCCA 130962699 >seq11 Length=59623150 Score = 102 bits (112), Expect = 9e-17 Identities = 156/221 (71%), Gaps = 1/221 (0%) Strand=Plus/Plus Query 27412 ATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGC 27471 || |||| ||||| || | || || || || || || |||||||| | || | Sbjct 13412068 ATTTTTGAGAAGACCCTAATGGGGAAAACCATCACGCTCGAGGTTGAACCCTCGGACACT 13412127 Query 27472 ATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGT 27531 || | |||| | |||| || | ||||||||||| ||||||| ||| | |||||| | Sbjct 13412128 ATAGAAAATGTAAAGGTCAAGACCCAGGACAAGGAAGGAATTCTTCCTCATCAGCAGAGG 13412187 Query 27532 CTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAA 27591 || | |||||||||||| | || || |||| || || | | ||||| || | ||| Sbjct 13412188 CTGGTCTTTGCTGGTAAG-AGCTGGAAGATGGCCGGACTTTGTCTGACTACAACATTCAA 13412246 Query 27592 AAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||| || || |||||||| || ||| | ||||| ||||| Sbjct 13412247 AAGGAGTCTACCCTTCATCTGGTGTTGAGACTTCGGGGTGG 13412287 Score = 102 bits (112), Expect = 9e-17 Identities = 156/221 (71%), Gaps = 1/221 (0%) Strand=Plus/Plus Query 27412 ATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGC 27471 || |||| ||||| || | || || || || || || |||||||| | || | Sbjct 13413019 ATTTTTGAGAAGACCCTAATGGGGAAAACCATCACGCTCGAGGTTGAACCCTCGGACACT 13413078 Query 27472 ATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGT 27531 || | |||| | |||| || | ||||||||||| ||||||| ||| | |||||| | Sbjct 13413079 ATAGAAAATGTAAAGGTCAAGACCCAGGACAAGGAAGGAATTCTTCCTCATCAGCAGAGG 13413138 Query 27532 CTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAA 27591 || | |||||||||||| | || || |||| || || | | ||||| || | ||| Sbjct 13413139 CTGGTCTTTGCTGGTAAG-AGCTGGAAGATGGCCGGACTTTGTCTGACTACAACATTCAA 13413197 Query 27592 AAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||| || || |||||||| || ||| | ||||| ||||| Sbjct 13413198 AAGGAGTCTACCCTTCATCTGGTGTTGAGACTTCGGGGTGG 13413238 >seq7 Length=104786220 Score = 91.5 bits (100), Expect = 2e-13 Identities = 85/108 (79%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 64726 GCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTA 64785 || ||||| |||||||||||||||||| ||||| ||||| | | || ||||||||| Sbjct 35874049 GCCTTTGCTGCTGTGGAAGGAATTTTCTTCTCTGGATCATTTGCTGCAATATTCTGGCTA 35873990 Query 64786 AAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATC 64833 || ||| | ||||| ||||| || ||| | ||||| || || |||||| Sbjct 35873989 AAGAAGAGAGGCCTCATGCCTGGACTGACTTTTTCAAATGAACTGATC 35873942 >seq3385 Length=62036 Score = 86.0 bits (94), Expect = 7e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 64726 GCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTA 64785 || ||||| |||||||||||||| ||| ||||| ||||| | | || ||||||||| Sbjct 20526 GCCTTTGCTGCTGTGGAAGGAATTTCCTTCTCTGGATCATTTGCTGCAATATTCTGGCTA 20585 Query 64786 AAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAG 64845 || ||| | ||||| ||||| | ||| | ||||| || || |||||| |||| || Sbjct 20586 AAGAAGAGAGGCCTCATGCCTGAACTGACTTTTTCAAATGAACTGATCAGCAGGGATGAA 20645 Query 64846 GGGCTCCACCAAGAATTTGC 64865 || || ||| || ||||| Sbjct 20646 GGTCTTCACTGTGACTTTGC 20665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570271875532480