Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mus_20spretus_20[genbank_20GCA_5F001624865.1_202016-04-26]
5,404 sequences; 2,625,587,472 total letters
Query= NC_028770.1
Length=59878
Score E
Sequences producing significant alignments: (Bits) Value
seq1874 118 4e-22
>seq1874
Length=4495
Score = 118 bits (130), Expect = 4e-22
Identities = 180/250 (72%), Gaps = 10/250 (4%)
Strand=Plus/Minus
Query 32682 GCGAAGCTCCTGATCGTGGACGAGTCCTCCATGGTGGACGAGCAGGTGGGAGAA-GACCT 32740
|| || ||||||||||| ||||| || ||||| ||||| ||| | || |||||
Sbjct 3444 GCCAAACTCCTGATCGTCGACGAAGTGTCGATGGTCGACGA-CAGTTTGGCTCGCGACCT 3386
Query 32741 GCTGTCCTTCGGGGTGCCGATCCTCGCCCTGGGCGACCCCGCCCAGCTGCCGCCCGTCAT 32800
|||||| || | || || ||||||| ||| ||||| || || |||||||| |||||||
Sbjct 3385 GCTGTCGTTTGACGTTCCTATCCTCGTCCTTGGCGATCCGGCGCAGCTGCCTCCCGTCAA 3326
Query 32801 GGGGGCCGGGTTCTTCACCAA-GCAGAAGGCCGACTTCCTCCTGACCGACATCCACCGAC 32859
|| | |||| |||| ||| || | | ||||| | || ||||| | || || |
Sbjct 3325 AGGCGAGGGGTATTTCATCAACGCTGCA-CCCGACACGATGCTTACCGAGGTTCATCGTC 3267
Query 32860 AGGCCCGCGACAACCCGATCATCGAGATGTCTCGCAT---CGTCCGCGAAGGCGGTGCCC 32916
|||| |||||||| ||||||||| ||| |||| ||||||||| |||||||| |
Sbjct 3266 AGGCGCGCGACAATCCGATCATCCGCATG---AGCATGGACGTCCGCGAGGGCGGTGCGC 3210
Query 32917 TGTCCCTGGG 32926
| ||| |||
Sbjct 3209 TAACCCGGGG 3200
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 191475711736320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |