Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20spretus_20[genbank_20GCA_5F001624865.1_202016-04-26] 5,404 sequences; 2,625,587,472 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq3385 370 1e-97 seq17 273 3e-68 seq14 235 8e-57 seq3 114 2e-20 seq4 107 3e-18 >seq3385 Length=62036 Score = 370 bits (410), Expect = 1e-97 Identities = 621/894 (69%), Gaps = 18/894 (2%) Strand=Plus/Minus Query 47837 CATAACTCCCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTC 47896 ||| ||| | | | | ||||| ||| || |||||||| || ||||| ||||| ||||| Sbjct 20963 CATGACTGCAAATCTCTGATACTCAGAAACTCGTTTCTCAAAGAAATTTGTTTTCCCTTC 20904 Query 47897 CAATGATATATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCC 47956 ||||| || || |||||||||||||| ||||| |||| | | |||| ||| ||||| Sbjct 20903 TAATGAAATGTTCTCCATAAAATCAAAGGGATTTTCTGCCTGAAAAATCTTTGAGAATCC 20844 Query 47957 TAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATT 48016 | |||| || | ||| || || || || || || || |||| ||| || | || Sbjct 20843 AAGTTCTATAAGTAATCTGTCAGCTACAAACTCAATGTACTGTTTCGTCAAAACATAGTT 20784 Query 48017 CATTCCTATAAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGC 48076 ||||| || || ||| || | || || || | |||||| || || || ||||| Sbjct 20783 AATTCCAATGAGGCCAACAGGCAAGGCTTCTGTTAAAAACTCCTGCTCAATTTGAACAGC 20724 Query 48077 ATCCACTATTATCGATGTTACCGTTTCCTCACTTGGTGGATACAACAAATGT--TTAAAC 48134 ||| | || || || ||||||| || || ||| | |||| Sbjct 20723 ATCAGCAATGAT-----------TTCCCTCACTCTGTCTTCTGAAGGCTTGTACTGAAAC 20675 Query 48135 ATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAAT 48194 || | || ||||| ||||| |||||||||||||| || || || | ||| || ||||| Sbjct 20674 ATCAGGCAGGCAAAGTCACAGTGAAGACCTTCATCCCTGCTGATCAGTTCATTTGAAAAA 20615 Query 48195 GTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAA 48254 || || | ||||| || || | || || ||||| |||||||| || || |||||||| Sbjct 20614 GTCAGTTCAGGCATGAGGCCTCTCTTCTTTAGCCAGAATATTGCAGCAAATGATCCAGAG 20555 Query 48255 AAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTT--CGT 48312 ||| | || ||||| || || ||||| || | ||| || || || | | || | Sbjct 20554 AAGGAAATTCCTTCCACAGCAGCAAAGGCCACCACTCTTTCCCCAAAAGTAGATTTCCTA 20495 Query 48313 TGTG-TATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATA 48371 | || |||||| || | ||||| || || || ||||| ||| | ||||||||||| || Sbjct 20494 TCTGCTATCCAGCGCAGAGCCCAGTCCGCTTTTTTCTTAACATATGGCATTGTTTCAATT 20435 Query 48372 GCATTAAAGAGAAAGttt-ttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACT 48430 || ||||| | ||| | ||||| ||| |||| | | |||||| ||||||| | ||| Sbjct 20434 GCGTTAAATAAAAATTCCCTTTTCTTTGG-ATCTCTGATGTAAGTGTCTATTAGTAAACT 20376 Query 48431 ATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTC 48490 ||||| || ||||||| ||| || || |||||||| || || || || | || Sbjct 20375 GTACATCTCTGAGTGAACATTCTCGATGAGAATCTGAAAGCCATAGAAGCAGTGAGTCTC 20316 Query 48491 TGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACT 48550 | | ||| |||||| || ||| || || |||| || |||||||| ||||||||||| Sbjct 20315 CGGAACCTGCACCTCCTGACTAAAACGCTCCACCAAGTTTTCATTTACAATTCCATCACT 20256 Query 48551 AGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATT 48610 || |||||||| ||||| | || ||||| || || |||| ||| | || || || Sbjct 20255 GGCTGCAAAAAAGGCTAAGATGTGGGAGATAAAGTACTTCTCGTCGGATTTAAGCTTGTT 20196 Query 48611 CCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGC 48670 ||||| | || || ||||| | || || ||||| ||||||| || |||||| ||| Sbjct 20195 CCAGTGAGGGAGGTCCTTTGACAAGTCAACCTCTTCTTCTGTCCAGAAAGATGCCCGTGC 20136 Query 48671 TTTTTTATACATATTCCATATATCACTGTATTGGATTGGGAAAATAACAAATCT 48724 || |||||||| |||| |||||| || |||||||| || || ||||| || Sbjct 20135 TTGCTTATACATTCTCCAGATATCAGGATACTGGATTGGAAAGATGACAAACCT 20082 Score = 149 bits (164), Expect = 9e-31 Identities = 283/417 (68%), Gaps = 14/417 (3%) Strand=Plus/Minus Query 47837 CATAACTCCCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTC 47896 ||| ||| | | | | ||||| ||| || |||||||| || ||||| ||||| ||||| Sbjct 21505 CATGACTGCAAATCTCTGATACTCAGAAACTCGTTTCTCAAAGAAATTTGTTTTCCCTTC 21446 Query 47897 CAATGATATATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCC 47956 ||||| || || |||||||||||||| ||||| |||| | | |||| ||| ||||| Sbjct 21445 TAATGAAATGTTCTCCATAAAATCAAAGGGATTTTCTGCCTGAAAAATCTTTGAGAATCC 21386 Query 47957 TAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATT 48016 | |||| || | ||| || || || || || || || |||| ||| || | || Sbjct 21385 AAGTTCTATAAGTAATCTGTCAGCTACAAACTCAATGTACTGTTTCGTCAAAACATAGTT 21326 Query 48017 CATTCCTATAAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGC 48076 ||||| || || ||| || | || || || | |||||| || || || ||||| Sbjct 21325 AATTCCAATGAGGCCAACAGGCAAGGCTTCTGTTAAAAACTCCTGCTCAATTTGAACAGC 21266 Query 48077 ATCCACTATTATCGATGTTACCGTTTCCTCACTTGGTGGATACAACAAATGT--TTAAAC 48134 ||| | || || || ||||||| || || ||| | |||| Sbjct 21265 ATCAGCAATGAT-----------TTCCCTCACTCTGTCTTCTGAAGGCTTGTACTGAAAC 21217 Query 48135 ATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAAT 48194 || | || ||||| ||||| |||||||||||||| || || || | ||| || ||||| Sbjct 21216 ATCAGGCAGGCAAAGTCACAGTGAAGACCTTCATCCCTGCTGATCAGTTCATTTGAAAAA 21157 Query 48195 GTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCA 48251 || || | ||||| || || | || || ||||| |||||| ||| | ||||||| Sbjct 21156 GTCAGTTCAGGCATGAGGCCTCTCTTCTTTAGCCAGAATATTNACGC-AGAGATCCA 21101 >seq17 Length=136257712 Score = 273 bits (302), Expect = 3e-68 Identities = 633/944 (67%), Gaps = 35/944 (4%) Strand=Plus/Plus Query 47795 TTAAAAGTCAACATCTAAAGAAAAATGATTATCT-TCT--TGAGACATAACTCCCATTTT 47851 ||| |||||| ||| || | |||| ||| ||| || | ||||| |||||||| | Sbjct 93987351 TTAGAAGTCAGCATGCAAGGTAAAAGAATTCTCTGTCAAATTCGACATGACTCCCATCCT 93987410 Query 47852 TTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTC 47911 ||||| || || || | ||||| || || | ||||| ||||| | ||| |||||||| Sbjct 93987411 CTGATACTCGCCTACTTGCTTCTCAAAGAAGTCTGTTTTTCCTTCTAGTGAAATATTTTC 93987470 Query 47912 CATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTC---TGAAAT 47968 ||| || ||||||||||| || | | |||| || |||| || | || || || Sbjct 93987471 CATGAAGTCAAATGGATTTTCTACTCTGAAAATCTTCTTAACACCCAGCTCCAGTGGAAG 93987530 Query 47969 CAGTCTATCTGC-AACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAA 48027 | || || || || ||||| || || ||||||| |||||| || | | Sbjct 93987531 C---CTGTCAGCCAAAAAATTCAATGTACTGCTTCATCAAAGTGCAATTCGCCCCGAAGA 93987587 Query 48028 GTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCAC-TATT 48086 | || || || | ||||||||| |||||||| || | || | |||| | | || Sbjct 93987588 GCTTCACAGGCAAAGCCTCCGTGAGAAACTCCTGCCCTATCCTAACAGTGTTGGTGTTTT 93987647 Query 48087 ATCGATGTTACCGTTTCCTCACTTGG--TGGATACAACAAATGTTTAAACATTAAACATG 48144 || | |||| |||| ||| ||| || ||| || || || ||||| | || | Sbjct 93987648 ATTTCTTTTACTGTTTGCTCCAATGGCTTGTGTAC--CAGGTGCTTGAACATCAGCCAGG 93987705 Query 48145 CAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGG 48204 || | || || || | ||| || ||||| ||||| || || || |||| ||| || || Sbjct 93987706 CAGAGTCCCAGTGTAAACCCTCGTCTCTGCTAATAAACTCATTGGAAAGTGTAAGGCCCA 93987765 Query 48205 GCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGC 48264 ||| |||| || || |||||||| ||||| | || |||||| | | Sbjct 93987766 ACATCAGTCTGCGATTCTTGAGCCAGAATATCGATGC------------AAAGAAGACTC 93987813 Query 48265 CTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGTA---TCC 48321 |||| || || ||||| || || || ||||| || || || |||| ||| Sbjct 93987814 CTTCCACCGCAGCAAAGGCCACAACTCATTCTCCATATGAGGACTCTTTGTCCCCAGTCC 93987873 Query 48322 ACCGTTGTGCCCAATCAGCCTTCTTCTTT---ACACAAGGCATTGTTTCTATAGCATTAA 48378 | || ||||| |||||||||||||| |||||||||||||||| |||||||| | Sbjct 93987874 AACGCAAGGCCCAGTCAGCCTTCTTCTTCTTCACACAAGGCATTGTTTAAATAGCATTGA 93987933 Query 48379 AGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTT 48438 ||||| | | | |||| ||| |||||||| ||| || || || | |||| ||||||| Sbjct 93987934 AGAGATATTCTCTTTCCTTGGGATCTTTAATGTACGTGTCAATAAGGGGACTGTACATTT 93987993 Query 48439 CGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCT 48498 | ||||| || ||||| || || | || || || || ||||| | || ||||| | | Sbjct 93987994 CAGAGTGTATGTTTTCCATGGCAGTTTGGAAGCCATAGAAACAGCGGGCCTCTGTAACTT 93988053 Query 48499 GTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAA 48558 | || || | |||||| || |||| || ||||| ||||| |||||||| || |||| Sbjct 93988054 GAACTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTGACTATGCCATCACTCGCTGCAA 93988113 Query 48559 AAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCAT 48618 | || || | | || ||||||| | | || | |||| | ||||| | Sbjct 93988114 AGAAAGCCAGAATGTGAGCTATAAAATGTCTCTCATCCAGTTTCAGAGCTTCCCAGTGTT 93988173 Query 48619 TGATATCTTTTGATATATCTA-CTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTA 48677 ||| | || || | || | |||||| || |||||||| || ||||| ||||| || Sbjct 93988174 GAATACCCTTGGAAAGGTCCACCTTCTT-GGCAGTCCAAAAGGAGGCCTCAGCTTTCTTG 93988232 Query 48678 TACATATTCCATATATCACTGTATTGGATTGGGAAAATAACAAA 48721 ||||| | ||| |||||| ||||| || || || | |||||| Sbjct 93988233 TACATCTGCCAGATATCATGGTATTCAATGGGAAAGACAACAAA 93988276 Score = 109 bits (120), Expect = 8e-19 Identities = 104/133 (78%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 77127 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 77186 |||||||| || ||||| ||||| |||||||| || ||||||||||| || || | || Sbjct 91856952 TGAAATTCCCCTGACAAGACTCTTCGAGTGTAGATGTTACTGGTATAAGGCTCAATGGAC 91856893 Query 77187 TCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTA 77246 ||||| || |||| ||| || ||||| |||||||| ||||| || || | | |||||| Sbjct 91856892 TCATTATTCCCCAGAATCTGGGCAGTTGAAGCAGTAGGCATTGGGGCAATAAGTAAACTG 91856833 Query 77247 TTTCTGAGACCAT 77259 || || | ||||| Sbjct 91856832 TTCCTTATACCAT 91856820 Score = 102 bits (112), Expect = 1e-16 Identities = 107/141 (76%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 78399 GTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTG 78458 || || ||||| || | || ||||| ||||| || ||||| || ||||||||||| ||| Sbjct 91844417 GTCCCAGCATTGAAGAGAGTAGGAGAGGCATGAGTGAACCACTTCTCAGAAAGTAGGTTG 91844358 Query 78459 TATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAAC 78518 || |||||||| || | || || || || ||||| || || | || | ||||||| Sbjct 91844357 TAGGTTTCAATTGCAGCATCAATATCTTCTTTGTGAATCCCCACAGAAACCCTCATCAAC 91844298 Query 78519 ATATGCTGAGGTCTTTCAACC 78539 |||||||| ||||||||| || Sbjct 91844297 ATATGCTGTGGTCTTTCAGCC 91844277 Score = 102 bits (112), Expect = 1e-16 Identities = 125/171 (73%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 76849 TCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATATGAATAT 76908 |||| |||||||| ||||| || || |||||| || | || || || ||||| || | Sbjct 91860047 TCCAACCGTAGAAGTGCATACTAGTGAGTTTGCCGTAGTTGGGCTCAGCAATATGGATGT 91859988 Query 76909 TCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCT 76968 | | ||||| || |||||||||||||| ||||| || || ||||| || | || |||| Sbjct 91859987 TTAAAGACTGGCTCTGATCGATGAAAGCACCTCTCTCGGCTGCCATCTTGAGAACAGTCT 91859928 Query 76969 TTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAA 77019 | |||| |||||||| | || || | | ||| || | ||||| |||| Sbjct 91859927 TCTGAGAGATTTCCCACACGGTCTTATAGAGTTGCTTCAGGTCATCAGGAA 91859877 Score = 98.7 bits (108), Expect = 1e-15 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 77355 GATCCATTATATGTTTCATAAGGTCCTT-CTGTTTCAGCTAGTTCACAACTCGCTTCCAA 77413 ||||| | ||| |||||||| || || | || || ||||||||||| || ||||||| Sbjct 91853968 GATCCCTCATACGTTTCATAGGGGCCATACTCCTTG-GCTAGTTCACAGCTGGCTTCCAG 91853910 Query 77414 TGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATC 77473 ||||| || ||||| ||||| || |||| |||||| | || ||||| || || Sbjct 91853909 GGCTCCATAGTAAATGGTTTCAAAGATCTGCTTATTTAATAACTGGGCTTCTGGGCTCTC 91853850 Query 77474 AAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGG 77533 ||| || || | || || || ||||||||||| || || || ||||| ||||| || Sbjct 91853849 AAAGGGGTATCTCATCAGGATGAAAGCATCTGCTAAACCTTGTACCCCAATTCCAATGGG 91853790 Query 77534 TCTATGTCTCTTATTGGA 77551 | ||| | ||||| || Sbjct 91853789 ACGATGGCGTTTATTTGA 91853772 >seq14 Length=152946536 Score = 235 bits (260), Expect = 8e-57 Identities = 622/931 (67%), Gaps = 34/931 (4%) Strand=Plus/Plus Query 47795 TTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGAG---ACATAACTCCCATTTT 47851 |||||||||| || | || | |||| ||| | || | || |||| || ||||| Sbjct 69609683 TTAAAAGTCAGCACCCAAGGTAAAAGAATTCT-TTGTGGAATTCACATGACGCCCATCCA 69609741 Query 47852 TTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTC 47911 ||||| || || || || ||||| || || || || || ||||| ||||| |||||||| Sbjct 69609742 CTGATACTCGCCTACTCGCTTCTCAAAGAAGTTTGTCTTTCCTTCTAATGAAATATTTTC 69609801 Query 47912 CATAAAATCAAATGGATTAACTGCATT-ATAAAtttttttAAATCCTAATTCTGAAATCA 47970 ||| || ||||||||||| || | | |||| || ||||| || | || || | Sbjct 69609802 CATGAAGTCAAATGGATTTCCTACTCCGAAAAATCTTGTTAAAACCCAGCTCCAGCATAA 69609861 Query 47971 GTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAGTT 48030 | ||||| || || ||||| || || ||||||| || ||||| | || || Sbjct 69609862 GCCTATCGGCCACAAATTCAATGTACTGCTTCATCAAAGTGCAGTTCATCTCGATGAGCA 69609921 Query 48031 TAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAG-TGACAGCATCCACTATTATC 48089 | || || | |||||| | || | | | || || || | || | | ||||| Sbjct 69609922 TCACAGGCAAGGCCTCCATGAGGATCCCCTGCTCTATCCCTAACCTCGTTGGTGATTATT 69609981 Query 48090 GATGTTACCGTTTCCTCACTTGG--TGGATACAACAAATGTTTAAACATTAAACATGCAA 48147 | |||| | | || ||| || ||| || || || ||||| | | ||| Sbjct 69609982 TCTTTTAC--TCTGCTTCGATGGCTTGTGTAC--CAGGTGCTTGAACATCAGGTAGACAA 69610037 Query 48148 AATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCA 48207 | || || || | ||| | ||||| ||||| | || || |||||||| | || |||| Sbjct 69610038 AGTCCCAGTGTAAACCCTAGTCTCTGCTAATAAGCTCATTGGAAAATGTAGGGCCCGGCA 69610097 Query 48208 TTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAA-GAATATGCCT 48266 | || || |||| |||||||| ||||| | || ||||| |||||||| ||| || || Sbjct 69610098 TCAGCCCCTGTTTCTTGAGCCAGAATATCGATGCAAAAGAACCAGAAAAAGAAGATTGCT 69610157 Query 48267 TCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGTA---TCCAC 48323 ||||| | ||||| || || || ||| | || | |||| |||| |||| Sbjct 69610158 TCTACCGTGGCAAAGGCCACAACTCGTTCTGCATATGTAACTTCTTTGTCCCCAGTCCAA 69610217 Query 48324 CGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGA 48383 | ||||| |||||||||| |||| ||||||||||| |||||||| || ||| Sbjct 69610218 TGCAAGGCCCAGTCAGCCTTCT------CACA-GGCATTGTTTCAATAGCATTGAAAAGA 69610270 Query 48384 AAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAG 48443 | | | |||| ||| |||||||| |||| | || || | ||||| ||||||| ||| Sbjct 69610271 TATTCTCTTTCTTTGGGATCTTTAATGTAAATGTCAATAAGGAGACTGTACATTTTAGAG 69610330 Query 48444 TGAATATTTTCAATTGCCA-TCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTAC 48502 || || |||| ||||| | | || || | |||||||| || ||||| | || || Sbjct 69610331 TGTATCCTTTC-CCTGCCAGTTTAGAAGCCAT-AAAACATCCAGCCTCTGTAACTTGAAC 69610388 Query 48503 CTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAA 48562 || | |||||| || |||| || | || | ||| |||||||| || ||||| || Sbjct 69610389 TTCTTGGCTAAATCGCTCCACCAAGTTTGCGTTGAGTATGCCATCACTCGCTGCAAAGAA 69610448 Query 48563 TGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGAT 48622 || | ||||| |||||| |||| || | |||| | ||||| |||| Sbjct 69610449 AGCCAGAACATGAGCTATAAAA----TTTC--TGTCATTCAGAGCTTCCCAGT-GCTGAT 69610501 Query 48623 ATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACAT 48682 || || || | || || || ||| | |||||||| | ||||| ||||| || ||||| Sbjct 69610502 CTCCTTGGAAAGGTCCACCTCCTCATCAGTCCAAAAGGTGGCCTCAGCTTTCTTGTACAT 69610561 Query 48683 ATTCCATATATCACTGTATTGGATTGGGAAA 48713 | ||| |||||| ||| | || ||||||| Sbjct 69610562 CTGCCAGATATCATGGTACTAGA-TGGGAAA 69610591 >seq3 Length=125065471 Score = 114 bits (126), Expect = 2e-20 Identities = 280/420 (67%), Gaps = 12/420 (3%) Strand=Plus/Plus Query 180918 TTGGCTGATGAATTGTTCAACAGGGCATCACTTCAGTTAAATGAAACATTCAACTTTACT 180977 ||||||| || |||||| ||||||||| | |||||| | ||||| ||| |||||| Sbjct 83413381 TTGGCTGCTGCATTGTTTAACAGGGCAGAATTTCAGTACGAGGAAACTTTCCCCTTTACC 83413440 Query 180978 AGATCTGTCAATGTTAAAGTTACA--GCTAGTTCAGGTAAACAACTAAGAACACGTCTTA 181035 ||||| ||||| |||||||| ||| ||||| |||| || ||| ||| | | Sbjct 83413441 AGATCCAGATATGTTGAAGTTACATTGCT--TTCAGCGAAACGCCTGCGAAAACGCATCA 83413498 Query 181036 AGCAACAACTTCCTTCTACAGTAGCATCTTTTGCCAATACAGATGGTGGATATTTGTTCA 181095 | | | || ||| || || | ||||||| || || ||||| |||| |||||||| Sbjct 83413499 AAGAGCTCCTCCCTCAAACTGTTTCTGCTTTTGCAAACACGGATGGGGGATTTTTGTTCA 83413558 Query 181096 TTGGGTTGGATGGTAAGACGAATAAAGTAATTGGATTCAATGCTAGTCAAGA-ATACATT 181154 |||| |||||||| || || | || | ||||| || | || || |||| | | Sbjct 83413559 TTGGTTTGGATGGCAAAACCCAGCAAATTATTGGTTTTGAAGC-AGAGAAGAGCGATCTC 83413617 Query 181155 GATATGATAGGCTATGAGATAGAAAAGCGTATTAAAAGACTTCATGTAGTACACTTTTGT 181214 | | ||| ||| |||||||||| || || | ||| ||||| ||| Sbjct 83413618 GTGCTTCTAGAGAGTGAAATAGAAAAGCACATCCGGCAGCTGCCTGTCACTCACTTCTGT 83413677 Query 181215 GAGAAAAAAGAGGATATCAAGTACGCATGTAAATTCATAAAGGTATATAGACCAGATGAT 181274 ||| | || ||| | ||||||||| | || |||||||| | || | | | | | | | Sbjct 83413678 GAGGAGAAGGAGAAGATCAAGTACACGTGCAAATTCATCGAAGTGCACAAATCCGGAGCT 83413737 Query 181275 GAGAATACATCGACATATGTATGTGCTATCAAAGTGGAGAGATGTTGTTGTGCTGTGTTC 181334 | | | ||||||| ||||| ||| ||||||||||| || ||||| || ||| Sbjct 83413738 GTG------TGTGCATATGTGTGTGCGCTCAGAGTGGAGAGATTCTGCTGTGCAGTATTC 83413791 >seq4 Length=114123490 Score = 107 bits (118), Expect = 3e-18 Identities = 95/119 (80%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 48165 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTG 48224 || ||||| ||||| | || || |||||||| || || ||||| || || ||||| ||| Sbjct 16582947 TCGTCTCTGCTAATAAGCTCATTGGAAAATGTAAGGCCCGGCATCAGCCCCCGTTTCTTG 16582888 Query 48225 AGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGC 48283 ||||| ||||||| || ||||| || |||||||| || ||||||||||| ||||| || Sbjct 16582887 AGCCAGAATATTGATGCAAAAGAACCGGAAAAGAAGATTCCTTCTACGGCGGCAAAGGC 16582829 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694621875122560