Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mus_20spretus_20[genbank_20GCA_5F001624865.1_202016-04-26]
5,404 sequences; 2,625,587,472 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq3385 370 1e-97
seq17 273 3e-68
seq14 235 8e-57
seq3 114 2e-20
seq4 107 3e-18
>seq3385
Length=62036
Score = 370 bits (410), Expect = 1e-97
Identities = 621/894 (69%), Gaps = 18/894 (2%)
Strand=Plus/Minus
Query 47837 CATAACTCCCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTC 47896
||| ||| | | | | ||||| ||| || |||||||| || ||||| ||||| |||||
Sbjct 20963 CATGACTGCAAATCTCTGATACTCAGAAACTCGTTTCTCAAAGAAATTTGTTTTCCCTTC 20904
Query 47897 CAATGATATATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCC 47956
||||| || || |||||||||||||| ||||| |||| | | |||| ||| |||||
Sbjct 20903 TAATGAAATGTTCTCCATAAAATCAAAGGGATTTTCTGCCTGAAAAATCTTTGAGAATCC 20844
Query 47957 TAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATT 48016
| |||| || | ||| || || || || || || || |||| ||| || | ||
Sbjct 20843 AAGTTCTATAAGTAATCTGTCAGCTACAAACTCAATGTACTGTTTCGTCAAAACATAGTT 20784
Query 48017 CATTCCTATAAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGC 48076
||||| || || ||| || | || || || | |||||| || || || |||||
Sbjct 20783 AATTCCAATGAGGCCAACAGGCAAGGCTTCTGTTAAAAACTCCTGCTCAATTTGAACAGC 20724
Query 48077 ATCCACTATTATCGATGTTACCGTTTCCTCACTTGGTGGATACAACAAATGT--TTAAAC 48134
||| | || || || ||||||| || || ||| | ||||
Sbjct 20723 ATCAGCAATGAT-----------TTCCCTCACTCTGTCTTCTGAAGGCTTGTACTGAAAC 20675
Query 48135 ATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAAT 48194
|| | || ||||| ||||| |||||||||||||| || || || | ||| || |||||
Sbjct 20674 ATCAGGCAGGCAAAGTCACAGTGAAGACCTTCATCCCTGCTGATCAGTTCATTTGAAAAA 20615
Query 48195 GTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAA 48254
|| || | ||||| || || | || || ||||| |||||||| || || ||||||||
Sbjct 20614 GTCAGTTCAGGCATGAGGCCTCTCTTCTTTAGCCAGAATATTGCAGCAAATGATCCAGAG 20555
Query 48255 AAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTT--CGT 48312
||| | || ||||| || || ||||| || | ||| || || || | | || |
Sbjct 20554 AAGGAAATTCCTTCCACAGCAGCAAAGGCCACCACTCTTTCCCCAAAAGTAGATTTCCTA 20495
Query 48313 TGTG-TATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATA 48371
| || |||||| || | ||||| || || || ||||| ||| | ||||||||||| ||
Sbjct 20494 TCTGCTATCCAGCGCAGAGCCCAGTCCGCTTTTTTCTTAACATATGGCATTGTTTCAATT 20435
Query 48372 GCATTAAAGAGAAAGttt-ttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACT 48430
|| ||||| | ||| | ||||| ||| |||| | | |||||| ||||||| | |||
Sbjct 20434 GCGTTAAATAAAAATTCCCTTTTCTTTGG-ATCTCTGATGTAAGTGTCTATTAGTAAACT 20376
Query 48431 ATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTC 48490
||||| || ||||||| ||| || || |||||||| || || || || | ||
Sbjct 20375 GTACATCTCTGAGTGAACATTCTCGATGAGAATCTGAAAGCCATAGAAGCAGTGAGTCTC 20316
Query 48491 TGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACT 48550
| | ||| |||||| || ||| || || |||| || |||||||| |||||||||||
Sbjct 20315 CGGAACCTGCACCTCCTGACTAAAACGCTCCACCAAGTTTTCATTTACAATTCCATCACT 20256
Query 48551 AGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATT 48610
|| |||||||| ||||| | || ||||| || || |||| ||| | || || ||
Sbjct 20255 GGCTGCAAAAAAGGCTAAGATGTGGGAGATAAAGTACTTCTCGTCGGATTTAAGCTTGTT 20196
Query 48611 CCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGC 48670
||||| | || || ||||| | || || ||||| ||||||| || |||||| |||
Sbjct 20195 CCAGTGAGGGAGGTCCTTTGACAAGTCAACCTCTTCTTCTGTCCAGAAAGATGCCCGTGC 20136
Query 48671 TTTTTTATACATATTCCATATATCACTGTATTGGATTGGGAAAATAACAAATCT 48724
|| |||||||| |||| |||||| || |||||||| || || ||||| ||
Sbjct 20135 TTGCTTATACATTCTCCAGATATCAGGATACTGGATTGGAAAGATGACAAACCT 20082
Score = 149 bits (164), Expect = 9e-31
Identities = 283/417 (68%), Gaps = 14/417 (3%)
Strand=Plus/Minus
Query 47837 CATAACTCCCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTC 47896
||| ||| | | | | ||||| ||| || |||||||| || ||||| ||||| |||||
Sbjct 21505 CATGACTGCAAATCTCTGATACTCAGAAACTCGTTTCTCAAAGAAATTTGTTTTCCCTTC 21446
Query 47897 CAATGATATATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCC 47956
||||| || || |||||||||||||| ||||| |||| | | |||| ||| |||||
Sbjct 21445 TAATGAAATGTTCTCCATAAAATCAAAGGGATTTTCTGCCTGAAAAATCTTTGAGAATCC 21386
Query 47957 TAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATT 48016
| |||| || | ||| || || || || || || || |||| ||| || | ||
Sbjct 21385 AAGTTCTATAAGTAATCTGTCAGCTACAAACTCAATGTACTGTTTCGTCAAAACATAGTT 21326
Query 48017 CATTCCTATAAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGC 48076
||||| || || ||| || | || || || | |||||| || || || |||||
Sbjct 21325 AATTCCAATGAGGCCAACAGGCAAGGCTTCTGTTAAAAACTCCTGCTCAATTTGAACAGC 21266
Query 48077 ATCCACTATTATCGATGTTACCGTTTCCTCACTTGGTGGATACAACAAATGT--TTAAAC 48134
||| | || || || ||||||| || || ||| | ||||
Sbjct 21265 ATCAGCAATGAT-----------TTCCCTCACTCTGTCTTCTGAAGGCTTGTACTGAAAC 21217
Query 48135 ATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAAT 48194
|| | || ||||| ||||| |||||||||||||| || || || | ||| || |||||
Sbjct 21216 ATCAGGCAGGCAAAGTCACAGTGAAGACCTTCATCCCTGCTGATCAGTTCATTTGAAAAA 21157
Query 48195 GTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCA 48251
|| || | ||||| || || | || || ||||| |||||| ||| | |||||||
Sbjct 21156 GTCAGTTCAGGCATGAGGCCTCTCTTCTTTAGCCAGAATATTNACGC-AGAGATCCA 21101
>seq17
Length=136257712
Score = 273 bits (302), Expect = 3e-68
Identities = 633/944 (67%), Gaps = 35/944 (4%)
Strand=Plus/Plus
Query 47795 TTAAAAGTCAACATCTAAAGAAAAATGATTATCT-TCT--TGAGACATAACTCCCATTTT 47851
||| |||||| ||| || | |||| ||| ||| || | ||||| |||||||| |
Sbjct 93987351 TTAGAAGTCAGCATGCAAGGTAAAAGAATTCTCTGTCAAATTCGACATGACTCCCATCCT 93987410
Query 47852 TTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTC 47911
||||| || || || | ||||| || || | ||||| ||||| | ||| ||||||||
Sbjct 93987411 CTGATACTCGCCTACTTGCTTCTCAAAGAAGTCTGTTTTTCCTTCTAGTGAAATATTTTC 93987470
Query 47912 CATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTC---TGAAAT 47968
||| || ||||||||||| || | | |||| || |||| || | || || ||
Sbjct 93987471 CATGAAGTCAAATGGATTTTCTACTCTGAAAATCTTCTTAACACCCAGCTCCAGTGGAAG 93987530
Query 47969 CAGTCTATCTGC-AACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAA 48027
| || || || || ||||| || || ||||||| |||||| || | |
Sbjct 93987531 C---CTGTCAGCCAAAAAATTCAATGTACTGCTTCATCAAAGTGCAATTCGCCCCGAAGA 93987587
Query 48028 GTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCAC-TATT 48086
| || || || | ||||||||| |||||||| || | || | |||| | | ||
Sbjct 93987588 GCTTCACAGGCAAAGCCTCCGTGAGAAACTCCTGCCCTATCCTAACAGTGTTGGTGTTTT 93987647
Query 48087 ATCGATGTTACCGTTTCCTCACTTGG--TGGATACAACAAATGTTTAAACATTAAACATG 48144
|| | |||| |||| ||| ||| || ||| || || || ||||| | || |
Sbjct 93987648 ATTTCTTTTACTGTTTGCTCCAATGGCTTGTGTAC--CAGGTGCTTGAACATCAGCCAGG 93987705
Query 48145 CAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGG 48204
|| | || || || | ||| || ||||| ||||| || || || |||| ||| || ||
Sbjct 93987706 CAGAGTCCCAGTGTAAACCCTCGTCTCTGCTAATAAACTCATTGGAAAGTGTAAGGCCCA 93987765
Query 48205 GCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGC 48264
||| |||| || || |||||||| ||||| | || |||||| | |
Sbjct 93987766 ACATCAGTCTGCGATTCTTGAGCCAGAATATCGATGC------------AAAGAAGACTC 93987813
Query 48265 CTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGTA---TCC 48321
|||| || || ||||| || || || ||||| || || || |||| |||
Sbjct 93987814 CTTCCACCGCAGCAAAGGCCACAACTCATTCTCCATATGAGGACTCTTTGTCCCCAGTCC 93987873
Query 48322 ACCGTTGTGCCCAATCAGCCTTCTTCTTT---ACACAAGGCATTGTTTCTATAGCATTAA 48378
| || ||||| |||||||||||||| |||||||||||||||| |||||||| |
Sbjct 93987874 AACGCAAGGCCCAGTCAGCCTTCTTCTTCTTCACACAAGGCATTGTTTAAATAGCATTGA 93987933
Query 48379 AGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTT 48438
||||| | | | |||| ||| |||||||| ||| || || || | |||| |||||||
Sbjct 93987934 AGAGATATTCTCTTTCCTTGGGATCTTTAATGTACGTGTCAATAAGGGGACTGTACATTT 93987993
Query 48439 CGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCT 48498
| ||||| || ||||| || || | || || || || ||||| | || ||||| | |
Sbjct 93987994 CAGAGTGTATGTTTTCCATGGCAGTTTGGAAGCCATAGAAACAGCGGGCCTCTGTAACTT 93988053
Query 48499 GTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAA 48558
| || || | |||||| || |||| || ||||| ||||| |||||||| || ||||
Sbjct 93988054 GAACTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTGACTATGCCATCACTCGCTGCAA 93988113
Query 48559 AAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCAT 48618
| || || | | || ||||||| | | || | |||| | ||||| |
Sbjct 93988114 AGAAAGCCAGAATGTGAGCTATAAAATGTCTCTCATCCAGTTTCAGAGCTTCCCAGTGTT 93988173
Query 48619 TGATATCTTTTGATATATCTA-CTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTA 48677
||| | || || | || | |||||| || |||||||| || ||||| ||||| ||
Sbjct 93988174 GAATACCCTTGGAAAGGTCCACCTTCTT-GGCAGTCCAAAAGGAGGCCTCAGCTTTCTTG 93988232
Query 48678 TACATATTCCATATATCACTGTATTGGATTGGGAAAATAACAAA 48721
||||| | ||| |||||| ||||| || || || | ||||||
Sbjct 93988233 TACATCTGCCAGATATCATGGTATTCAATGGGAAAGACAACAAA 93988276
Score = 109 bits (120), Expect = 8e-19
Identities = 104/133 (78%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 77127 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 77186
|||||||| || ||||| ||||| |||||||| || ||||||||||| || || | ||
Sbjct 91856952 TGAAATTCCCCTGACAAGACTCTTCGAGTGTAGATGTTACTGGTATAAGGCTCAATGGAC 91856893
Query 77187 TCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTA 77246
||||| || |||| ||| || ||||| |||||||| ||||| || || | | ||||||
Sbjct 91856892 TCATTATTCCCCAGAATCTGGGCAGTTGAAGCAGTAGGCATTGGGGCAATAAGTAAACTG 91856833
Query 77247 TTTCTGAGACCAT 77259
|| || | |||||
Sbjct 91856832 TTCCTTATACCAT 91856820
Score = 102 bits (112), Expect = 1e-16
Identities = 107/141 (76%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 78399 GTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTG 78458
|| || ||||| || | || ||||| ||||| || ||||| || ||||||||||| |||
Sbjct 91844417 GTCCCAGCATTGAAGAGAGTAGGAGAGGCATGAGTGAACCACTTCTCAGAAAGTAGGTTG 91844358
Query 78459 TATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAAC 78518
|| |||||||| || | || || || || ||||| || || | || | |||||||
Sbjct 91844357 TAGGTTTCAATTGCAGCATCAATATCTTCTTTGTGAATCCCCACAGAAACCCTCATCAAC 91844298
Query 78519 ATATGCTGAGGTCTTTCAACC 78539
|||||||| ||||||||| ||
Sbjct 91844297 ATATGCTGTGGTCTTTCAGCC 91844277
Score = 102 bits (112), Expect = 1e-16
Identities = 125/171 (73%), Gaps = 0/171 (0%)
Strand=Plus/Minus
Query 76849 TCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATATGAATAT 76908
|||| |||||||| ||||| || || |||||| || | || || || ||||| || |
Sbjct 91860047 TCCAACCGTAGAAGTGCATACTAGTGAGTTTGCCGTAGTTGGGCTCAGCAATATGGATGT 91859988
Query 76909 TCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCT 76968
| | ||||| || |||||||||||||| ||||| || || ||||| || | || ||||
Sbjct 91859987 TTAAAGACTGGCTCTGATCGATGAAAGCACCTCTCTCGGCTGCCATCTTGAGAACAGTCT 91859928
Query 76969 TTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAA 77019
| |||| |||||||| | || || | | ||| || | ||||| ||||
Sbjct 91859927 TCTGAGAGATTTCCCACACGGTCTTATAGAGTTGCTTCAGGTCATCAGGAA 91859877
Score = 98.7 bits (108), Expect = 1e-15
Identities = 142/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 77355 GATCCATTATATGTTTCATAAGGTCCTT-CTGTTTCAGCTAGTTCACAACTCGCTTCCAA 77413
||||| | ||| |||||||| || || | || || ||||||||||| || |||||||
Sbjct 91853968 GATCCCTCATACGTTTCATAGGGGCCATACTCCTTG-GCTAGTTCACAGCTGGCTTCCAG 91853910
Query 77414 TGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATC 77473
||||| || ||||| ||||| || |||| |||||| | || ||||| || ||
Sbjct 91853909 GGCTCCATAGTAAATGGTTTCAAAGATCTGCTTATTTAATAACTGGGCTTCTGGGCTCTC 91853850
Query 77474 AAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGG 77533
||| || || | || || || ||||||||||| || || || ||||| ||||| ||
Sbjct 91853849 AAAGGGGTATCTCATCAGGATGAAAGCATCTGCTAAACCTTGTACCCCAATTCCAATGGG 91853790
Query 77534 TCTATGTCTCTTATTGGA 77551
| ||| | ||||| ||
Sbjct 91853789 ACGATGGCGTTTATTTGA 91853772
>seq14
Length=152946536
Score = 235 bits (260), Expect = 8e-57
Identities = 622/931 (67%), Gaps = 34/931 (4%)
Strand=Plus/Plus
Query 47795 TTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGAG---ACATAACTCCCATTTT 47851
|||||||||| || | || | |||| ||| | || | || |||| || |||||
Sbjct 69609683 TTAAAAGTCAGCACCCAAGGTAAAAGAATTCT-TTGTGGAATTCACATGACGCCCATCCA 69609741
Query 47852 TTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTC 47911
||||| || || || || ||||| || || || || || ||||| ||||| ||||||||
Sbjct 69609742 CTGATACTCGCCTACTCGCTTCTCAAAGAAGTTTGTCTTTCCTTCTAATGAAATATTTTC 69609801
Query 47912 CATAAAATCAAATGGATTAACTGCATT-ATAAAtttttttAAATCCTAATTCTGAAATCA 47970
||| || ||||||||||| || | | |||| || ||||| || | || || |
Sbjct 69609802 CATGAAGTCAAATGGATTTCCTACTCCGAAAAATCTTGTTAAAACCCAGCTCCAGCATAA 69609861
Query 47971 GTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAGTT 48030
| ||||| || || ||||| || || ||||||| || ||||| | || ||
Sbjct 69609862 GCCTATCGGCCACAAATTCAATGTACTGCTTCATCAAAGTGCAGTTCATCTCGATGAGCA 69609921
Query 48031 TAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAG-TGACAGCATCCACTATTATC 48089
| || || | |||||| | || | | | || || || | || | | |||||
Sbjct 69609922 TCACAGGCAAGGCCTCCATGAGGATCCCCTGCTCTATCCCTAACCTCGTTGGTGATTATT 69609981
Query 48090 GATGTTACCGTTTCCTCACTTGG--TGGATACAACAAATGTTTAAACATTAAACATGCAA 48147
| |||| | | || ||| || ||| || || || ||||| | | |||
Sbjct 69609982 TCTTTTAC--TCTGCTTCGATGGCTTGTGTAC--CAGGTGCTTGAACATCAGGTAGACAA 69610037
Query 48148 AATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCA 48207
| || || || | ||| | ||||| ||||| | || || |||||||| | || ||||
Sbjct 69610038 AGTCCCAGTGTAAACCCTAGTCTCTGCTAATAAGCTCATTGGAAAATGTAGGGCCCGGCA 69610097
Query 48208 TTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAA-GAATATGCCT 48266
| || || |||| |||||||| ||||| | || ||||| |||||||| ||| || ||
Sbjct 69610098 TCAGCCCCTGTTTCTTGAGCCAGAATATCGATGCAAAAGAACCAGAAAAAGAAGATTGCT 69610157
Query 48267 TCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGTA---TCCAC 48323
||||| | ||||| || || || ||| | || | |||| |||| ||||
Sbjct 69610158 TCTACCGTGGCAAAGGCCACAACTCGTTCTGCATATGTAACTTCTTTGTCCCCAGTCCAA 69610217
Query 48324 CGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGA 48383
| ||||| |||||||||| |||| ||||||||||| |||||||| || |||
Sbjct 69610218 TGCAAGGCCCAGTCAGCCTTCT------CACA-GGCATTGTTTCAATAGCATTGAAAAGA 69610270
Query 48384 AAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAG 48443
| | | |||| ||| |||||||| |||| | || || | ||||| ||||||| |||
Sbjct 69610271 TATTCTCTTTCTTTGGGATCTTTAATGTAAATGTCAATAAGGAGACTGTACATTTTAGAG 69610330
Query 48444 TGAATATTTTCAATTGCCA-TCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTAC 48502
|| || |||| ||||| | | || || | |||||||| || ||||| | || ||
Sbjct 69610331 TGTATCCTTTC-CCTGCCAGTTTAGAAGCCAT-AAAACATCCAGCCTCTGTAACTTGAAC 69610388
Query 48503 CTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAA 48562
|| | |||||| || |||| || | || | ||| |||||||| || ||||| ||
Sbjct 69610389 TTCTTGGCTAAATCGCTCCACCAAGTTTGCGTTGAGTATGCCATCACTCGCTGCAAAGAA 69610448
Query 48563 TGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGAT 48622
|| | ||||| |||||| |||| || | |||| | ||||| ||||
Sbjct 69610449 AGCCAGAACATGAGCTATAAAA----TTTC--TGTCATTCAGAGCTTCCCAGT-GCTGAT 69610501
Query 48623 ATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACAT 48682
|| || || | || || || ||| | |||||||| | ||||| ||||| || |||||
Sbjct 69610502 CTCCTTGGAAAGGTCCACCTCCTCATCAGTCCAAAAGGTGGCCTCAGCTTTCTTGTACAT 69610561
Query 48683 ATTCCATATATCACTGTATTGGATTGGGAAA 48713
| ||| |||||| ||| | || |||||||
Sbjct 69610562 CTGCCAGATATCATGGTACTAGA-TGGGAAA 69610591
>seq3
Length=125065471
Score = 114 bits (126), Expect = 2e-20
Identities = 280/420 (67%), Gaps = 12/420 (3%)
Strand=Plus/Plus
Query 180918 TTGGCTGATGAATTGTTCAACAGGGCATCACTTCAGTTAAATGAAACATTCAACTTTACT 180977
||||||| || |||||| ||||||||| | |||||| | ||||| ||| ||||||
Sbjct 83413381 TTGGCTGCTGCATTGTTTAACAGGGCAGAATTTCAGTACGAGGAAACTTTCCCCTTTACC 83413440
Query 180978 AGATCTGTCAATGTTAAAGTTACA--GCTAGTTCAGGTAAACAACTAAGAACACGTCTTA 181035
||||| ||||| |||||||| ||| ||||| |||| || ||| ||| | |
Sbjct 83413441 AGATCCAGATATGTTGAAGTTACATTGCT--TTCAGCGAAACGCCTGCGAAAACGCATCA 83413498
Query 181036 AGCAACAACTTCCTTCTACAGTAGCATCTTTTGCCAATACAGATGGTGGATATTTGTTCA 181095
| | | || ||| || || | ||||||| || || ||||| |||| ||||||||
Sbjct 83413499 AAGAGCTCCTCCCTCAAACTGTTTCTGCTTTTGCAAACACGGATGGGGGATTTTTGTTCA 83413558
Query 181096 TTGGGTTGGATGGTAAGACGAATAAAGTAATTGGATTCAATGCTAGTCAAGA-ATACATT 181154
|||| |||||||| || || | || | ||||| || | || || |||| | |
Sbjct 83413559 TTGGTTTGGATGGCAAAACCCAGCAAATTATTGGTTTTGAAGC-AGAGAAGAGCGATCTC 83413617
Query 181155 GATATGATAGGCTATGAGATAGAAAAGCGTATTAAAAGACTTCATGTAGTACACTTTTGT 181214
| | ||| ||| |||||||||| || || | ||| ||||| |||
Sbjct 83413618 GTGCTTCTAGAGAGTGAAATAGAAAAGCACATCCGGCAGCTGCCTGTCACTCACTTCTGT 83413677
Query 181215 GAGAAAAAAGAGGATATCAAGTACGCATGTAAATTCATAAAGGTATATAGACCAGATGAT 181274
||| | || ||| | ||||||||| | || |||||||| | || | | | | | | |
Sbjct 83413678 GAGGAGAAGGAGAAGATCAAGTACACGTGCAAATTCATCGAAGTGCACAAATCCGGAGCT 83413737
Query 181275 GAGAATACATCGACATATGTATGTGCTATCAAAGTGGAGAGATGTTGTTGTGCTGTGTTC 181334
| | | ||||||| ||||| ||| ||||||||||| || ||||| || |||
Sbjct 83413738 GTG------TGTGCATATGTGTGTGCGCTCAGAGTGGAGAGATTCTGCTGTGCAGTATTC 83413791
>seq4
Length=114123490
Score = 107 bits (118), Expect = 3e-18
Identities = 95/119 (80%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 48165 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTG 48224
|| ||||| ||||| | || || |||||||| || || ||||| || || ||||| |||
Sbjct 16582947 TCGTCTCTGCTAATAAGCTCATTGGAAAATGTAAGGCCCGGCATCAGCCCCCGTTTCTTG 16582888
Query 48225 AGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGC 48283
||||| ||||||| || ||||| || |||||||| || ||||||||||| ||||| ||
Sbjct 16582887 AGCCAGAATATTGATGCAAAAGAACCGGAAAAGAAGATTCCTTCTACGGCGGCAAAGGC 16582829
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694621875122560
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