Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20spretus_20[genbank_20GCA_5F001624865.1_202016-04-26] 5,404 sequences; 2,625,587,472 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq3385 342 7e-89 seq17 271 1e-67 seq14 208 1e-48 seq3 87.8 3e-12 >seq3385 Length=62036 Score = 342 bits (378), Expect = 7e-89 Identities = 611/891 (69%), Gaps = 12/891 (1%) Strand=Plus/Minus Query 46326 CATAACTCCCATTTTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTC 46385 ||| ||| | | | | || || ||| || |||||||| || ||||| ||||| ||||| Sbjct 20963 CATGACTGCAAATCTCTGATACTCAGAAACTCGTTTCTCAAAGAAATTTGTTTTCCCTTC 20904 Query 46386 CAATGATATATTTTCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCC 46445 ||||| || || |||||||||||||| ||||| | | | |||| ||| ||||| Sbjct 20903 TAATGAAATGTTCTCCATAAAATCAAAGGGATTTTCTGCCTGAAAAATCTTTGAGAATCC 20844 Query 46446 TAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATT 46505 | |||| || | ||| || || || || || || ||| |||| ||| || | || Sbjct 20843 AAGTTCTATAAGTAATCTGTCAGCTACAAACTCAATGTACTGTTTCGTCAAAACATAGTT 20784 Query 46506 CATTCCTATGAGTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGC 46565 ||||| ||||| || || | || || || | |||||| || ||||| ||||| Sbjct 20783 AATTCCAATGAGGCCAACAGGCAAGGCTTCTGTTAAAAACTCCTGCTCAATTTGAACAGC 20724 Query 46566 ATCCGATATTATCGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACAT 46625 ||| | || || | ||| | || || || | || | | || |||||| Sbjct 20723 ATCAGCAATGATTTCCCTCACTCTGTCTTC------TGAAGGCTTGTACTG---AAACAT 20673 Query 46626 TAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGT 46685 | || ||||| ||||| ||||| |||||||| || || || | ||| || ||||| || Sbjct 20672 CAGGCAGGCAAAGTCACAGTGAAGACCTTCATCCCTGCTGATCAGTTCATTTGAAAAAGT 20613 Query 46686 GAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAA 46745 || ||||||| || || | ||| || ||||| ||||| || || || |||||||| || Sbjct 20612 CAGTTCAGGCATGAGGCCTCTCTTCTTTAGCCAGAATATTGCAGCAAATGATCCAGAGAA 20553 Query 46746 GAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATG 46805 | | || ||||| ||||| || || || || | ||| || || || | | | ||| Sbjct 20552 GGAAATTCCTTCCACAGCAGCAAAGGCCACCACTCTTTCCCCAAAAGTAGATTTCCTATC 20493 Query 46806 A---ATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGC 46862 ||||| | ||||||| || || |||||||| ||| | ||||||||||| || || Sbjct 20492 TGCTATCCAGCGCAGAGCCCAGTCCGCTTTTTTCTTAACATATGGCATTGTTTCAATTGC 20433 Query 46863 ATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATA 46922 ||||| | ||| | ||| | |||| | | || || ||||||| | ||| || Sbjct 20432 GTTAAATAAAAATTCCCTTTTCTTTGGATCTCTGATGTAAGTGTCTATTAGTAAACTGTA 20373 Query 46923 CATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGT 46982 ||| ||||| |||| || || || |||||||| || || || || | || | Sbjct 20372 CATCTCTGAGTGAACATTCTCGATGAGAATCTGAAAGCCATAGAAGCAGTGAGTCTCCGG 20313 Query 46983 AATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGC 47042 || ||| ||||| || ||| || || ||| || ||||| || ||||||||||| || Sbjct 20312 AACCTGCACCTCCTGACTAAAACGCTCCACCAAGTTTTCATTTACAATTCCATCACTGGC 20253 Query 47043 AGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATTCCA 47102 |||||||| || || | || ||||| || || || |||| | || || ||||| Sbjct 20252 TGCAAAAAAGGCTAAGATGTGGGAGATAAAGTACTTCTCGTCGGATTTAAGCTTGTTCCA 20193 Query 47103 GTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTT 47162 || | || || ||||| | || || ||||| |||||||||| || ||| ||||| Sbjct 20192 GTGAGGGAGGTCCTTTGACAAGTCAACCTCTTCTTCTGTCCAGAAAGATGCCCGTGCTTG 20133 Query 47163 TTTATACATATTCCATATATCACGATATTGGATCGGAAAAATAACAAATCT 47213 |||||||| |||| |||||| |||| ||||| ||||| || ||||| || Sbjct 20132 CTTATACATTCTCCAGATATCAGGATACTGGATTGGAAAGATGACAAACCT 20082 Score = 145 bits (160), Expect = 1e-29 Identities = 282/415 (68%), Gaps = 10/415 (2%) Strand=Plus/Minus Query 46326 CATAACTCCCATTTTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTC 46385 ||| ||| | | | | || || ||| || |||||||| || ||||| ||||| ||||| Sbjct 21505 CATGACTGCAAATCTCTGATACTCAGAAACTCGTTTCTCAAAGAAATTTGTTTTCCCTTC 21446 Query 46386 CAATGATATATTTTCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCC 46445 ||||| || || |||||||||||||| ||||| | | | |||| ||| ||||| Sbjct 21445 TAATGAAATGTTCTCCATAAAATCAAAGGGATTTTCTGCCTGAAAAATCTTTGAGAATCC 21386 Query 46446 TAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATT 46505 | |||| || | ||| || || || || || || ||| |||| ||| || | || Sbjct 21385 AAGTTCTATAAGTAATCTGTCAGCTACAAACTCAATGTACTGTTTCGTCAAAACATAGTT 21326 Query 46506 CATTCCTATGAGTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGC 46565 ||||| ||||| || || | || || || | |||||| || ||||| ||||| Sbjct 21325 AATTCCAATGAGGCCAACAGGCAAGGCTTCTGTTAAAAACTCCTGCTCAATTTGAACAGC 21266 Query 46566 ATCCGATATTATCGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACAT 46625 ||| | || || | ||| | || || || | || | | || |||||| Sbjct 21265 ATCAGCAATGATTTCCCTCACTCTGTCTTC------TGAAGGCTTGTACTG---AAACAT 21215 Query 46626 TAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGT 46685 | || ||||| ||||| ||||| |||||||| || || || | ||| || ||||| || Sbjct 21214 CAGGCAGGCAAAGTCACAGTGAAGACCTTCATCCCTGCTGATCAGTTCATTTGAAAAAGT 21155 Query 46686 GAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCA 46740 || ||||||| || || | ||| || ||||| ||||| ||| | ||||||| Sbjct 21154 CAGTTCAGGCATGAGGCCTCTCTTCTTTAGCCAGAATATTNACGC-AGAGATCCA 21101 >seq17 Length=136257712 Score = 271 bits (300), Expect = 1e-67 Identities = 603/899 (67%), Gaps = 28/899 (3%) Strand=Plus/Plus Query 46324 GACATAACTCCCATTTTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCT 46383 ||||| |||||||| | || || || ||||| | ||||| || || | ||||| ||| Sbjct 93987394 GACATGACTCCCATCCTCTGATACTCGCCTACTTGCTTCTCAAAGAAGTCTGTTTTTCCT 93987453 Query 46384 TCCAATGATATATTTTCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAAT 46443 || | ||| ||||||||||| || ||||| ||||| || | |||| || |||| Sbjct 93987454 TCTAGTGAAATATTTTCCATGAAGTCAAATGGATTTTCTACTCTGAAAATCTTCTTAACA 93987513 Query 46444 CCTAATTC---TGAAATCAGTCTATCTGC-AACGAATTCTATATACGTTTTCATCATTTC 46499 || | || || || | || || || || ||||| || ||| ||||||| Sbjct 93987514 CCCAGCTCCAGTGGAAGC---CTGTCAGCCAAAAAATTCAATGTACTGCTTCATCAAAGT 93987570 Query 46500 ACAATTCATTCCTATGAGTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGT 46559 |||||| || | ||| || || || | ||||||||| |||||||| || | || | Sbjct 93987571 GCAATTCGCCCCGAAGAGCTTCACAGGCAAAGCCTCCGTGAGAAACTCCTGCCCTATCCT 93987630 Query 46560 GACAGCATCCGA-TATTATCGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTT 46618 |||| | | | |||| | ||||||||| ||| ||| || | || || | Sbjct 93987631 AACAGTGTTGGTGTTTTATTTCTTTTACTGTTTGCTCCAATGGCTTGTGTACCAGGTGCT 93987690 Query 46619 TAAACATTAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAG 46678 | ||||| | || ||| | || || || | || || ||||| ||||| || || || | Sbjct 93987691 TGAACATCAGCCAGGCAGAGTCCCAGTGTAAACCCTCGTCTCTGCTAATAAACTCATTGG 93987750 Query 46679 AAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATC 46738 ||| ||| || || ||| |||| || || |||||||| ||||| | || Sbjct 93987751 AAAGTGTAAGGCCCAACATCAGTCTGCGATTCTTGAGCCAGAATATCGATGC-------- 93987802 Query 46739 CAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCAT 46798 |||||| | ||||| || || || || || |||| || ||||| || || | Sbjct 93987803 ----AAAGAAGACTCCTTCCACCGCAGCAAAGGCCACAACTCATTCTCCATATGAGGACT 93987858 Query 46799 CATTATG---AATCCACCTTTGAGCCCAATCAGCCTTTTTCTTT---ACACAAGGCATTG 46852 | || | | |||| | ||||| |||||||| ||||| ||||||||||||| Sbjct 93987859 CTTTGTCCCCAGTCCAACGCAAGGCCCAGTCAGCCTTCTTCTTCTTCACACAAGGCATTG 93987918 Query 46853 TTTCTATAGCATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTA 46912 ||| |||||||| |||||| | | | |||| | |||||||| || || || || | Sbjct 93987919 TTTAAATAGCATTGAAGAGATATTCTCTTTCCTTGGGATCTTTAATGTACGTGTCAATAA 93987978 Query 46913 AAAGACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATC 46972 |||| |||||||| || || |||||||| || || | || || || || ||||| | Sbjct 93987979 GGGGACTGTACATTTCAGAGTGTATGTTTTCCATGGCAGTTTGGAAGCCATAGAAACAGC 93988038 Query 46973 TTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTC 47032 || || |||| || || ||| | |||||| || ||| || ||||| ||||| | Sbjct 93988039 GGGCCTCTGTAACTTGAACTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTGACTATGC 93988098 Query 47033 CATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCA 47092 ||||||| || ||||| || |||| | || ||||||| | | ||||| ||| Sbjct 93988099 CATCACTCGCTGCAAAGAAAGCCAGAATGTGAGCTATAAAATGTCTCTCATCCAGTTTCA 93988158 Query 47093 GTTTATTCCAGTCATTGATATCTTTTGATATATCTA-CTTCTTCAGCTGTCCAGAATGAC 47151 | | ||||| | ||| | || || | || | |||||| || ||||| || || Sbjct 93988159 GAGCTTCCCAGTGTTGAATACCCTTGGAAAGGTCCACCTTCTT-GGCAGTCCAAAAGGAG 93988217 Query 47152 GCCTCTGCTTTTTTATACATATTCCATATATCACGATATTGGATCGGAAAAATAACAAA 47210 ||||| ||||| || ||||| | ||| |||||| | |||| || ||||| | |||||| Sbjct 93988218 GCCTCAGCTTTCTTGTACATCTGCCAGATATCATGGTATTCAATGGGAAAGACAACAAA 93988276 Score = 118 bits (130), Expect = 2e-21 Identities = 106/133 (80%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 75722 TGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 75781 |||||||| || ||||| |||||||||||||| || ||||||||||| || || | || Sbjct 91856952 TGAAATTCCCCTGACAAGACTCTTCGAGTGTAGATGTTACTGGTATAAGGCTCAATGGAC 91856893 Query 75782 TCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTA 75841 ||||| || |||| ||| || |||||||||||||| ||||| || || | | |||||| Sbjct 91856892 TCATTATTCCCCAGAATCTGGGCAGTTGAAGCAGTAGGCATTGGGGCAATAAGTAAACTG 91856833 Query 75842 TTTCTGAGACCAT 75854 || || | ||||| Sbjct 91856832 TTCCTTATACCAT 91856820 Score = 116 bits (128), Expect = 5e-21 Identities = 108/137 (79%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 76994 GTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTG 77053 || || ||||| || | |||||||| |||||||||||||| || ||||||||||| ||| Sbjct 91844417 GTCCCAGCATTGAAGAGAGTAGGAGAGGCATGAGTGAACCACTTCTCAGAAAGTAGGTTG 91844358 Query 77054 TATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAAC 77113 || |||||||| | || || ||||| || ||||| || |||| || | ||||||| Sbjct 91844357 TAGGTTTCAATTGCAGCATCAATATCTTCTTTGTGAATCCCCACAGAAACCCTCATCAAC 91844298 Query 77114 ATATGCTGAGGTCGTTC 77130 |||||||| |||| ||| Sbjct 91844297 ATATGCTGTGGTCTTTC 91844281 Score = 102 bits (112), Expect = 1e-16 Identities = 125/171 (73%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 75444 TCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATAT 75503 |||| |||||||| ||||| || || |||||| || | || || || ||||| || | Sbjct 91860047 TCCAACCGTAGAAGTGCATACTAGTGAGTTTGCCGTAGTTGGGCTCAGCAATATGGATGT 91859988 Query 75504 TCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCT 75563 | | ||||| || |||||||||||||| ||||| || || ||||| || | || |||| Sbjct 91859987 TTAAAGACTGGCTCTGATCGATGAAAGCACCTCTCTCGGCTGCCATCTTGAGAACAGTCT 91859928 Query 75564 TTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAA 75614 | |||| |||||||| | || || | | ||| || | ||||| |||| Sbjct 91859927 TCTGAGAGATTTCCCACACGGTCTTATAGAGTTGCTTCAGGTCATCAGGAA 91859877 Score = 93.3 bits (102), Expect = 6e-14 Identities = 120/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 77339 CTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATT 77398 || || | ||| |||||||| ||||| | || || |||||||| || || || || || Sbjct 91840172 CTGAACACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACGGCTATCCTTGCTGCCAGGATG 91840113 Query 77399 GCATAGTCAGGATGTTGTGTAGTGCAGGTGGCTGCTATTTCTGCCGCTAAAGTATCTAAT 77458 ||||||||||| || | || || |||| || ||| | || || || | || || | | Sbjct 91840112 GCATAGTCAGGGTGCTTCGTGGTCAAGGTCGCGGCTGTCTCAGCAGCCAGGGTGTCCAGT 91840053 Query 77459 TCTATAGTAGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGG 77504 || | || || || || ||||||| ||||| || |||||||||| Sbjct 91840052 TCCACTGTGGTGACCCCACTATATAGGCCTTGGATTACTTTCATGG 91840007 >seq14 Length=152946536 Score = 208 bits (230), Expect = 1e-48 Identities = 612/928 (66%), Gaps = 29/928 (3%) Strand=Plus/Plus Query 46284 TTAAAAGTCGACATCTAAAGAAAAATGATTATCTTCTTG---TGACATAACTCCCATTTT 46340 ||||||||| || | || | |||| ||| | || | | | |||| || ||||| Sbjct 69609683 TTAAAAGTCAGCACCCAAGGTAAAAGAATTCT-TTGTGGAATTCACATGACGCCCATCCA 69609741 Query 46341 TTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTC 46400 || || || ||||| || ||||| || || || || || ||||| ||||| |||||||| Sbjct 69609742 CTGATACTCGCCTACTCGCTTCTCAAAGAAGTTTGTCTTTCCTTCTAATGAAATATTTTC 69609801 Query 46401 CATAAAATCAAACGGATTAGTAACATT-ATAAAtttttttAAATCCTAATTCTGAAATCA 46459 ||| || ||||| ||||| || | |||| || ||||| || | || || | Sbjct 69609802 CATGAAGTCAAATGGATTTCCTACTCCGAAAAATCTTGTTAAAACCCAGCTCCAGCATAA 69609861 Query 46460 GTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGTT 46519 | ||||| || || ||||| || ||| ||||||| || ||||| | ||||| Sbjct 69609862 GCCTATCGGCCACAAATTCAATGTACTGCTTCATCAAAGTGCAGTTCATCTCGATGAGCA 69609921 Query 46520 TGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAG-TGACAGCATCCGATATTATC 46578 | || || | |||||| | || | | | || || || | || | | | ||||| Sbjct 69609922 TCACAGGCAAGGCCTCCATGAGGATCCCCTGCTCTATCCCTAACCTCGTTGGTGATTATT 69609981 Query 46579 GATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAAA 46638 | ||||| | | || | | | | || | || || || ||||| | | |||| Sbjct 69609982 TCTTTTACTCTG-CTTCGATGGCTTG-TGTACCAGGTGCTTGAACATCAGGTAGACAAAG 69610039 Query 46639 TCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATT 46698 || || || | || | ||||| ||||| | || || |||||||| | || ||||| Sbjct 69610040 TCCCAGTGTAAACCCTAGTCTCTGCTAATAAGCTCATTGGAAAATGTAGGGCCCGGCATC 69610099 Query 46699 AGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAA-GAATATGCCTTC 46757 || || | || |||||||| ||||| | || ||||| |||||||| ||| || |||| Sbjct 69610100 AGCCCCTGTTTCTTGAGCCAGAATATCGATGCAAAAGAACCAGAAAAAGAAGATTGCTTC 69610159 Query 46758 TACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATG---AATCCACCT 46814 ||| | || || || |||| || ||| | || | | || || | | |||| Sbjct 69610160 TACCGTGGCAAAGGCCACAACTCGTTCTGCATATGTAACTTCTTTGTCCCCAGTCCAATG 69610219 Query 46815 TTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAA 46874 ||||| |||||||| | |||| ||||||||||| |||||||| || ||| | Sbjct 69610220 CAAGGCCCAGTCAGCCTTCT------CACA-GGCATTGTTTCAATAGCATTGAAAAGATA 69610272 Query 46875 GtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATG 46934 | | |||| | |||||||| || | || || | ||||| ||||||| || || Sbjct 69610273 TTCTCTTTCTTTGGGATCTTTAATGTAAATGTCAATAAGGAGACTGTACATTTTAGAGTG 69610332 Query 46935 AATGTTTTCAATAGCCA-TCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCT 46993 || |||| | |||| | | || || | |||||||| || || |||| || || | Sbjct 69610333 TATCCTTTCCCT-GCCAGTTTAGAAGCCAT-AAAACATCCAGCCTCTGTAACTTGAACTT 69610390 Query 46994 CTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATG 47053 || | |||||| || ||| || | || | ||| |||||||| || ||||| || | Sbjct 69610391 CTTGGCTAAATCGCTCCACCAAGTTTGCGTTGAGTATGCCATCACTCGCTGCAAAGAAAG 69610450 Query 47054 CCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGATAT 47113 ||| ||||| ||||||| | | |||| |||| | ||||| |||| | Sbjct 69610451 CCAGAACATGAGCTATAAAATTTCTGTCAT------TCAGAGCTTCCCAGT-GCTGATCT 69610503 Query 47114 CTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATAT 47173 | || || | || || || ||| | ||||| || | ||||| ||||| || ||||| | Sbjct 69610504 CCTTGGAAAGGTCCACCTCCTCATCAGTCCAAAAGGTGGCCTCAGCTTTCTTGTACATCT 69610563 Query 47174 TCCATATATCACGATATTGGATCGGAAA 47201 ||| |||||| | || | ||| ||||| Sbjct 69610564 GCCAGATATCATGGTACTAGATGGGAAA 69610591 >seq3 Length=125065471 Score = 87.8 bits (96), Expect = 3e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 179048 TTGTTCAACAGGGCATCACTTCAGGCTAATGAATCATTCAACTTTACTAGATCTGTCAAT 179107 ||||| ||||||||| | ||||| | ||| | ||| |||||| ||||| || Sbjct 83413393 TTGTTTAACAGGGCAGAATTTCAGTACGAGGAAACTTTCCCCTTTACCAGATCCAGATAT 83413452 Query 179108 GTTAAAGTTACATCTATTTCGGGTAAACAACTAAGAACACGTCTAAAGCAACAACTTCCT 179167 ||| ||||||||| |||| | |||| || ||| ||| | || | | || ||| Sbjct 83413453 GTTGAAGTTACATTGCTTTCAGCGAAACGCCTGCGAAAACGCATCAAAGAGCTCCTCCCT 83413512 Query 179168 TCTACAGTCGCATCTTTTGCTAACACAGATGGTGGGTATTTGTTCATTGGATTGGATGGA 179227 || || | ||||||| ||||| ||||| || | |||||||||||| |||||||| Sbjct 83413513 CAAACTGTTTCTGCTTTTGCAAACACGGATGGGGGATTTTTGTTCATTGGTTTGGATGGC 83413572 Query 179228 AAAACAAATAAAGTAATTGGATT 179250 ||||| | || | ||||| || Sbjct 83413573 AAAACCCAGCAAATTATTGGTTT 83413595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712886241281280