Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20spretus_20[genbank_20GCA_5F001624865.1_202016-04-26] 5,404 sequences; 2,625,587,472 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq3 167 5e-36 seq15 149 1e-30 seq10 145 2e-29 seq17 132 1e-25 seq16 122 2e-22 seq8 118 2e-21 seq14 113 9e-20 seq12 113 9e-20 seq18 109 1e-18 seq20 102 2e-16 seq2 98.7 2e-15 seq11 96.9 7e-15 seq5 96.9 7e-15 seq6 93.3 9e-14 seq1 89.7 1e-12 >seq3 Length=125065471 Score = 167 bits (184), Expect = 5e-36 Identities = 175/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| || || || || ||||| || || ||| ||||| ||||||||||| |||| Sbjct 98064592 CCACCTCGAAGACGCAGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAATCAGAC 98064651 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||| ||||||||||||| ||||| ||||| || |||| | || |||||| || Sbjct 98064652 AGGGTGTGGCCATCCTCTAGCTGTTTGCCGGCGAATATCAGCCTCTGCTGGTCAGGTGGG 98064711 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 | |||||||||||||||||||| || ||||| | ||||| ||||| | || || Sbjct 98064712 AGGCCCTCCTTGTCTTGGATCTTGGCCTTTACATTCTCGATGGTGTCACTGGGCTCTACC 98064771 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || |||||||| ||||| ||| ||| ||||| ||||| |||||||| || Sbjct 98064772 TCAAGAGTGATGGTCTTGCCCATCAGGGTCTTCACGAAGATCTGCATGTT 98064821 Score = 149 bits (164), Expect = 1e-30 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| | ||| || || ||||| || | || ||||| ||||||||||| |||| Sbjct 62144673 CCACCCCTCAGACGGAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAG 62144614 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||||||||| ||||| || || || |||||||||| | || |||||| || Sbjct 62144613 AGGGTGCGGCCATCTTCTAGCTGCTTGCCCGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 62144554 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||| || || |||||||| || || ||| | ||||| ||||| | || || Sbjct 62144553 ATGCCCTCTTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACC 62144494 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || || ||||| ||||| || |||| ||||| ||||| ||||||||||| Sbjct 62144493 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATTTT 62144444 Score = 143 bits (158), Expect = 6e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| | ||| || || ||||| || | || ||||| ||||||||||| |||| Sbjct 62144901 CCACCCCTCAGACGGAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAG 62144842 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||||||||| ||||| || || ||||||||||||| | || |||||| || Sbjct 62144841 AGAGTGCGGCCATCTTCTAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 62144782 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||| || || |||||||| || || || | ||||| ||||| | || || Sbjct 62144781 ATGCCCTCTTTATCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCACC 62144722 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||| || |||| ||||| ||||| |||||||| Sbjct 62144721 TCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 62144675 Score = 96.9 bits (106), Expect = 7e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || ||||||| | |||||| || |||| ||||||||| || | ||| || | || | | Sbjct 60138489 TTCTGGATGTAGCAGTCAGATAGGGTGCAGCCATCCTCCAGCTTTTTACCATCGAATACC 60138548 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 | | || |||||| || || || || ||||||||||||| | || || | | | Sbjct 60138549 AGCCTCTGCTGGTCAGGTGGGATGCCTTCACTGTCTTGGATCTTGTCCTTGACATTCTTG 60138608 Query 283032 ATAGTGTC-CGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || ||||| | |||| ||| || |||||||| ||||| | |||| ||||| ||||| Sbjct 60138609 ATGGTGTCACTGGGCTT-GACCTCAAGAGTGATGGTCTTGTCTGTCAGGGTCTTCACGAA 60138667 Query 283091 TATCTGCATTTT 283102 |||||||| || Sbjct 60138668 GATCTGCATGTT 60138679 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 68910695 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 68910753 >seq15 Length=152823684 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| | |||||||| ||||| || | ||| ||||| ||||||||||| || | Sbjct 125084945 CCACCTCTGAGGCGAAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAATCTGAC 125085004 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||||||||| || || || || || |||||||||| | || |||||| || Sbjct 125085005 AGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 125085064 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| ||||||||||| || || | || || ||||| | ||||| Sbjct 125085065 ATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTCTCAATGGTGTCACTGGGCTCGACC 125085124 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| |||||||| || || || || || || |||||||| Sbjct 125085125 TCCAGGGTGATGGTCTTACCAGTTAAGGTTTTCACAAAGATCTGCAT 125085171 Score = 127 bits (140), Expect = 4e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||||| ||| || || ||||| | || ||| | || ||||||| |||||| | | Sbjct 26701577 CCACCACACAGTCGCAGCACCAGGTACAAGGTGGAATGGTTCTGGATGTAGTAGTCGGAA 26701636 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||| |||||||||| ||| |||| || || || |||| | || |||||| || Sbjct 26701637 AGGGTGTGGCCATCCTCCAGTGGTTTGCCTGCGAATATCAGCCTCTGCTGGTCAAGTGGG 26701696 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || ||||||||||||||||| | || || | | ||| ||||| | | ||| Sbjct 26701697 ATGCCTTCCTTGTCTTGGATCTTGACCTTGACATTCTTGATGGTGTCACTGGGCTGGACC 26701756 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || | |||||| ||||| || |||| ||||| | ||| |||||||| || Sbjct 26701757 TCAAAAGTGATGGTCTTGCCTGTCAGGGTCTTCATGAAGATCTGCATGTT 26701806 Score = 127 bits (140), Expect = 4e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||||| ||| || || ||||| | || ||| | || ||||||| |||||| | | Sbjct 26702782 CCACCACACAGTCGCAGCACCAGGTACAAGGTGGAATGGTTCTGGATGTAGTAGTCGGAA 26702841 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||| |||||||||| ||| |||| || || || |||| | || |||||| || Sbjct 26702842 AGGGTGTGGCCATCCTCCAGTGGTTTGCCTGCGAATATCAGCCTCTGCTGGTCAAGTGGG 26702901 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || ||||||||||||||||| | || || | | ||| ||||| | | ||| Sbjct 26702902 ATGCCTTCCTTGTCTTGGATCTTGACCTTGACATTCTTGATGGTGTCACTGGGCTGGACC 26702961 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || | |||||| ||||| || |||| ||||| | ||| |||||||| || Sbjct 26702962 TCAAAAGTGATGGTCTTGCCTGTCAGGGTCTTCATGAAGATCTGCATGTT 26703011 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 125103678 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 125103620 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 125107148 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 125107090 >seq10 Length=90668104 Score = 145 bits (160), Expect = 2e-29 Identities = 155/205 (76%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 282880 GCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGC 282939 ||||||| || ||||| || || ||| ||||| |||||||||||||| | || |||| Sbjct 33660457 GCAGGCGCAGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGC 33660516 Query 282940 GGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCT 282999 |||||||||| || ||||| || | || |||| | || |||||| || || || | Sbjct 33660517 GGCCATCCTCCAGCTGTTTGCCCGAGAATATCAGCCTCTGCTGGTCAGGAGGGATGCCTT 33660576 Query 283000 CCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAG 283059 |||||||||||||||| || || || | ||||| ||||| | ||||| || |||| Sbjct 33660577 CCTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCGACCTCAAGAG 33660636 Query 283060 TGATCGTCTTACCCGTCAAAGTCTT 283084 |||| ||||| ||||||| ||||| Sbjct 33660637 TGATGGTCTTGCCCGTCAGGGTCTT 33660661 >seq17 Length=136257712 Score = 132 bits (146), Expect = 1e-25 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || || | | |||||||| | || || ||||| ||||||||||||| Sbjct 39746537 ACCACCCCGAAGTCTCAACACCAGATGAAGGGTAGACTCCTTTTGAATGTTGTAGTCAGA 39746478 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | || |||||||| || || || || || |||||||||| | || || ||| || Sbjct 39746477 CAAAGTCCGGCCATCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCAGGAGG 39746418 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || ||||| || |||||||| || ||||| | || ||||||||||| | ||| || Sbjct 39746417 AATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAAC 39746358 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| || || ||||| | ||||| || | |||||||| Sbjct 39746357 CTCTAGCGTGATGGTTTTCCCCGTAAGGGTCTTCACAGAGATCTGCAT 39746310 >seq16 Length=150978388 Score = 122 bits (134), Expect = 2e-22 Identities = 139/187 (74%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 282916 GGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAAC 282975 |||||||||| |||| || ||||||||||| ||||| || || || |||||||||| | Sbjct 58879368 GGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCTAGCTGCTTGCCAGCAAAGATCAGCC 58879427 Query 282976 GTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAG 283035 || |||| | ||||| ||||| || || |||||||| || || ||| | || || | Sbjct 58879428 TCTGCTGGTAAGGGGGAATGCCCTCTTTATCCTGGATCTTGGCCTTCACGTTCTCTATGG 58879487 Query 283036 TGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCT 283095 |||| | || || || || ||||| ||||| || |||| ||||| | || |||| Sbjct 58879488 TGTCACTGGGCTCCACCTCTAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAGAAAGATCT 58879547 Query 283096 GCATTTT 283102 ||||||| Sbjct 58879548 GCATTTT 58879554 Score = 100 bits (110), Expect = 6e-16 Identities = 159/228 (70%), Gaps = 5/228 (2%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || || | | |||||||| | ||| || ||||| ||||||||||||| Sbjct 3200025 ACCACCCCGAAGTCTCAACACCAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGA 3200084 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | || || ||||| || || || || || ||||||| || | || || ||| || Sbjct 3200085 CAAAGTCCGTCCATCTTCCAGCTGCTTACCAGCAAAGACCAGCCTCTGCTGATCAGGAGG 3200144 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||| || |||||||| || ||||| | || |||| ||| || | ||| || Sbjct 3200145 AA-----GTCTTATCCTGGATCTTGGCCTTTACATTTTCTATAGAGTCTGAGGGTTCAAC 3200199 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | ||| ||||| || || ||||| | ||||| || || |||||||| Sbjct 3200200 CTGGAGTGTGATGGTTTTCCCCGTAAGGGTCTTCACAAAAATCTGCAT 3200247 >seq8 Length=97876770 Score = 118 bits (130), Expect = 2e-21 Identities = 165/229 (72%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTC-AG 282930 ||||||| | |||| | || ||||| | ||| || ||||| ||||||||||| | Sbjct 13844538 ACCACCAAGAAGGCTCAACACAAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAAA 13844479 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 ||| || ||||||| || || || || || ||||||| || | || || ||| | Sbjct 13844478 CAA--GTATGGCCATCTTCCAGCTGCTTACCAGCAAAGACCAGCCTCTGCTGATCAGGAG 13844421 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 |||| || ||||| || |||||||| || ||||| | || || |||||| | ||| | Sbjct 13844420 GAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATGGTGTCCAGGGGTTCAA 13844361 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | ||||| ||||| ||||| ||| | | ||||| || || |||||||| Sbjct 13844360 CCTCGAGCGTGATGGTCTTCCCCATAAGGGTCTTCACAAAAATCTGCAT 13844312 >seq14 Length=152946536 Score = 113 bits (124), Expect = 9e-20 Identities = 139/189 (74%), Gaps = 1/189 (1%) Strand=Plus/Plus Query 282913 TTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCA 282972 |||| ||||||||||||| | || |||||||| || || || || || |||||| ||| Sbjct 128583652 TTTGAATGTTGTAGTCAGACAAAGTCCGGCCATCTTCCAGCTGCTTACCAGCAAAGGTCA 128583711 Query 282973 AACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGA 283032 | | || || ||| |||| | ||||| || ||| |||| || ||||| | || | Sbjct 128583712 ACCTCTGCTGATCAGGAGGAAGTTCTTCCTTATCCTGGGTCTTGGCCTTTACATTTTCTA 128583771 Query 283033 TAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT-ACCCGTCAAAGTCTTAACGAAT 283091 |||||||||| | ||| || ||||| ||||| || || ||| | | ||||| || || Sbjct 128583772 TAGTGTCCGAGGGTTCAACCTCGAGCGTGATGGTTTTCCCCCATAAGGGTCTTCACAAAG 128583831 Query 283092 ATCTGCATT 283100 ||||||||| Sbjct 128583832 ATCTGCATT 128583840 Score = 113 bits (124), Expect = 9e-20 Identities = 137/187 (73%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 282913 TTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCA 282972 |||| ||||||||||||| | || |||||||| || || | || || |||||| ||| Sbjct 131977025 TTTGAATGTTGTAGTCAGACAAAGTCCGGCCATCTTCCAGCGGCTTACCAGCAAAGGTCA 131977084 Query 282973 AACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGA 283032 | | || || ||| |||| || ||||| || ||| |||| || ||||| | | | Sbjct 131977085 ACCTCTGCTGATCAGGAGGAAGTCCTTCCTTATCCTGGGTCTTGGCCTTTACATTTACTA 131977144 Query 283033 TAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATA 283092 |||||||||| | ||| || ||||| ||||| | ||| ||| | | ||||| || || | Sbjct 131977145 TAGTGTCCGAGGGTTCAACCTCGAGCGTGATGGCCTTCCCCATAAGGGTCTTCACAAAAA 131977204 Query 283093 TCTGCAT 283099 ||||||| Sbjct 131977205 TCTGCAT 131977211 Score = 95.1 bits (104), Expect = 3e-14 Identities = 132/184 (72%), Gaps = 1/184 (1%) Strand=Plus/Plus Query 282914 TTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAA 282973 ||| ||||||||||||| | || | |||||| || || || || || |||| |||||| Sbjct 31522162 TTGAATGTTGTAGTCAGACAAAGTACAGCCATCTTCCAGCTGCTTACCAGCAATGATCAA 31522221 Query 282974 ACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGAT 283033 | || || ||| | || || ||||| || |||||||| || ||| | | | || Sbjct 31522222 -CTCTGCTGATCAGGCAGATGTCCTTCCTTATCCTGGATCTTGGCCTTTGCATTTTTTAT 31522280 Query 283034 AGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATAT 283093 ||||||||||| ||| | ||||| |||| ||||| ||| | |||||| || || || Sbjct 31522281 AGTGTCCGAAGGTTCAGCCTCGAGCATGATGGTCTTCCCCACAAGAGTCTTCACAAAAAT 31522340 Query 283094 CTGC 283097 | || Sbjct 31522341 CAGC 31522344 >seq12 Length=182815943 Score = 113 bits (124), Expect = 9e-20 Identities = 163/228 (71%), Gaps = 4/228 (2%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || | | |||||||| | ||| || ||||| |||||||||||| Sbjct 146741556 ACCACCACGAAGTCTCAACACCAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCA-- 146741613 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || |||||||| | | | || || |||||||||| | || || ||| || Sbjct 146741614 AA--GTCCGGCCATCTTTCGGAGGCTTACCAGCAAAGATCAGCCTCTGCTGATCAGGAGG 146741671 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || ||||| || ||| |||| | ||||| | || ||||||||| | | ||| || Sbjct 146741672 AATTCCTTCCTTATCCTGGGTCTTGACCTTTACATTTTCTATAGTGTCCCAGGGTTCAAC 146741731 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| || || ||||| | ||||| || || |||||||| Sbjct 146741732 CTCCAGCGTGATGGTTTTCCCCGTAAGGGTCTTCACAAAAATCTGCAT 146741779 Score = 104 bits (114), Expect = 5e-17 Identities = 139/192 (72%), Gaps = 5/192 (3%) Strand=Plus/Minus Query 282915 TGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAA 282974 ||||||||||| |||| || |||| |||||| ||||| || || || |||||||| | Sbjct 121887487 TGGATGTTGTAATCAGAGAGGGTGCAGCCATCTTCTAGCTGCTTTCCTGCAAAGATGAGC 121887428 Query 282975 CGTTGTTGGTCACCCGGAATACCC----TCCTTGTCTTGGATCTTTGCTTTTACGGTATC 283030 | ||| |||||| ||||| ||| || || || |||||| |||| || ||| | || Sbjct 121887427 CTTTGCTGGTCAGGGGGAATGCCCTCTTTCTTTATCCTGGATC-TTGCCTTCACGTTCTC 121887369 Query 283031 GATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 ||| ||||| | || || || || ||||| ||||| |||| ||||| |||| Sbjct 121887368 GATGGTGTCACTGGGCTCCACATCTAGGGTGATGGTCTTGTTGGTCAGGGTCTTCTCGAA 121887309 Query 283091 TATCTGCATTTT 283102 || |||||||| Sbjct 121887308 GATTTGCATTTT 121887297 >seq18 Length=130317789 Score = 109 bits (120), Expect = 1e-18 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || || | | |||| ||| | ||| || ||||| ||||||||||||| Sbjct 111279658 ACCACCCCGAAGTCTCAACACCAAATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGA 111279717 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | || |||||||| || || || || || ||||||| || | || || ||| || Sbjct 111279718 CAAAGTCCGGCCATCTTCCAGCTGCTTACCAGCAAAGACCAGCCTCTGCTGATCAGGAGG 111279777 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || ||||| || |||||||| || ||||| | || ||||||||||| | ||| || Sbjct 111279778 AATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAAC 111279837 Query 283052 TTCGAGAGTGATCGTCTTACCCG 283074 || || ||||| || | |||| Sbjct 111279838 CTCAAGCGTGATGGTTTCCCCCG 111279860 Score = 87.8 bits (96), Expect = 4e-12 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 282995 ACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTC 283054 ||| ||||||||||||||||| || || || | ||||| ||||| | || || || Sbjct 68987745 ACCTTCCTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCAACCTC 68987804 Query 283055 GAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 |||||||| ||||| ||||||| ||||| ||||| |||||||| || Sbjct 68987805 AAGAGTGATGGTCTTGCCCGTCAGGGTCTTTACGAAGATCTGCATGTT 68987852 >seq20 Length=148322235 Score = 102 bits (112), Expect = 2e-16 Identities = 162/231 (70%), Gaps = 1/231 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| | ||| | || ||||| || | || ||||| ||||||||||| |||| Sbjct 62281943 CCACCCCTCAGATGGAGGACCAGGTGCAGGGTTGACTCTTTCTGGATGTTGTAATCAGGG 62281884 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || ||||| | ||||| || | |||||||||| | || |||||| || Sbjct 62281883 AGAGTATGGCCACCTTCTAGCTGCTCGTTAGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 62281824 Query 282993 -ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||| || || |||||||| || || || | | ||||||||| | || || Sbjct 62281823 GATGCCCTCTTTATCCTGGATCTTGGCCTTCACATTCTTGATAGTGTCACTGGGCTCCAC 62281764 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || || ||||| ||||||| ||| ||||| ||||| ||||||||||| Sbjct 62281763 CTCTAGGGTGATGGTCTTACTGTTCATGGTCTTCACGAAGATCTGCATTTT 62281713 Score = 98.7 bits (108), Expect = 2e-15 Identities = 139/194 (72%), Gaps = 1/194 (1%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 ||||| ||||||||||| |||| | ||||||||||| || ||||| || || |||||| Sbjct 135500364 TCTTTCTGGATGTTGTAATCAGAGAAGGTGCGGCCATCTTCCAGTTGCTTGCCTGCAAAG 135500423 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 || | | || ||||| | || ||||| || || |||||||| || || || | Sbjct 135500424 ATGAGCCTCTGCTGGTC-GGGGTGATGCCCTCTTTATCCTGGATCTTGGCCTTCACATTC 135500482 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 ||||| || || | || | || || ||||| ||||| || |||| ||||| || Sbjct 135500483 TCGATGGTTTCACTGGGCTCCATCTCTAGGGTGATGGTCTTGCCAGTCAGGGTCTTCTCG 135500542 Query 283089 AATATCTGCATTTT 283102 || || |||||||| Sbjct 135500543 AAGATTTGCATTTT 135500556 >seq2 Length=131945496 Score = 98.7 bits (108), Expect = 2e-15 Identities = 57/59 (97%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| Sbjct 90476238 TTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCGA 90476180 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 92873321 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 92873263 >seq11 Length=59623150 Score = 96.9 bits (106), Expect = 7e-15 Identities = 150/213 (70%), Gaps = 1/213 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || || | | |||||||| | || || ||||| ||||||||||||| Sbjct 13412288 ACCACCCCGAAGTCTCAACACCAGATGAAGGGTAGACTCCTTTTGAATGTTGTAGTCAGA 13412229 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | || |||||||| || || | || || | |||||| || | || || | | | Sbjct 13412228 CAAAGTCCGGCCATCTTCCAGCTCTTACCAG-CAAAGACCAGCCTCTGCTGATGAGGAAG 13412170 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || |||||||| ||| |||| | ||||| | || ||||||||||| | ||| || Sbjct 13412169 AATTCCTTCCTTGTCCTGGGTCTTGACCTTTACATTTTCTATAGTGTCCGAGGGTTCAAC 13412110 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTT 283084 ||||| ||||| || || ||| | | ||||| Sbjct 13412109 CTCGAGCGTGATGGTTTTCCCCATTAGGGTCTT 13412077 Score = 96.9 bits (106), Expect = 7e-15 Identities = 150/213 (70%), Gaps = 1/213 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || || | | |||||||| | || || ||||| ||||||||||||| Sbjct 13413239 ACCACCCCGAAGTCTCAACACCAGATGAAGGGTAGACTCCTTTTGAATGTTGTAGTCAGA 13413180 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | || |||||||| || || | || || | |||||| || | || || | | | Sbjct 13413179 CAAAGTCCGGCCATCTTCCAGCTCTTACCAG-CAAAGACCAGCCTCTGCTGATGAGGAAG 13413121 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || |||||||| ||| |||| | ||||| | || ||||||||||| | ||| || Sbjct 13413120 AATTCCTTCCTTGTCCTGGGTCTTGACCTTTACATTTTCTATAGTGTCCGAGGGTTCAAC 13413061 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTT 283084 ||||| ||||| || || ||| | | ||||| Sbjct 13413060 CTCGAGCGTGATGGTTTTCCCCATTAGGGTCTT 13413028 >seq5 Length=117181667 Score = 96.9 bits (106), Expect = 7e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || || | | |||||||| | ||| || |||| |||||||||||| Sbjct 9091594 ACCACCCCGAAGTCTCAACACCAGATGAAGGGTGGACTCCCTTTGAATGTTGTAGTCA-- 9091651 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || |||||||| || || || || || ||||||| || | || || | | || Sbjct 9091652 AA--GTCCGGCCATCTTCCAGCTGCTTACCAGCAAAGACCAGCCTCTGCTGATGAGGAGG 9091709 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || || ||||| || ||| |||| || |||| | || |||||||| | | ||| || Sbjct 9091710 AAGTCCTTCCTTATCCTGGGTCTTGGCCTTTATATTTTCTGTAGTGTCCCAGGGTTCAAC 9091769 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 ||||| |||| || || || || | ||||| || || ||||||||| Sbjct 9091770 CTCGAGCGTGACAGTTTTCCCTGTAAGGGTCTTCACAAAAATCTGCATT 9091818 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 17897816 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 17897874 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 17923453 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 17923395 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 17928290 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 17928232 >seq6 Length=117542938 Score = 93.3 bits (102), Expect = 9e-14 Identities = 123/171 (72%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || || | | |||||||| | ||| || ||||| ||||||||||||| Sbjct 35538739 ACCACCTCGAAGTCTCAACACCAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGA 35538798 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | || |||||||| || || || || || |||||||||| | || || ||| || Sbjct 35538799 CAAAGTACGGCCATCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCAGGAGG 35538858 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGA 283042 || | ||||| || ||| |||| || ||||| | || ||||||||||| Sbjct 35538859 AAGTTCTTCCTTATCCTGGGTCTTGGCCTTTACATTTTCTATAGTGTCCGA 35538909 >seq1 Length=198846266 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 173314049 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 173313991 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 173424281 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 173424339 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046666725086216