Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20spretus_20[genbank_20GCA_5F001624865.1_202016-04-26] 5,404 sequences; 2,625,587,472 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq17 141 7e-29 seq8 138 8e-28 seq3 127 1e-24 seq12 125 5e-24 seq14 116 3e-21 seq15 114 9e-21 seq5 109 4e-19 seq18 105 5e-18 seq16 105 5e-18 seq11 100 2e-16 seq6 98.7 7e-16 seq20 89.7 4e-13 seq10 87.8 1e-12 >seq17 Length=136257712 Score = 141 bits (156), Expect = 7e-29 Identities = 162/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 |||||||||||||| ||||| || ||||||||| |||||||| || | | || Sbjct 39746527 AGTCTCAACACCAGATGAAGGGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTCCGG 39746468 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 | || ||||||||||| || |||||||||| | ||||||||| | ||| | |||||| Sbjct 39746467 CCATCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCAGGAGGAATTCCTTCC 39746408 Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299 || ||| ||||| ||| | || |||| ||||| | || ||| ||||| | ||| Sbjct 39746407 TTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCTAGCGTG 39746348 Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || ||||| ||||||||||| |||| ||||| Sbjct 39746347 ATGGTTTTCCCCGTAAGGGTCTTCACAGAGATCTGCAT 39746310 >seq8 Length=97876770 Score = 138 bits (152), Expect = 8e-28 Identities = 167/224 (75%), Gaps = 5/224 (2%) Strand=Plus/Minus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGT-TGGC 44177 || |||||||| || ||||| ||| ||||||||| |||||||| || | ||| |||| Sbjct 13844528 AGGCTCAACACAAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAAACAAGTATGGC 13844469 Query 44178 GCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTT 44237 | || ||||||||||| || ||||||| || | ||||||||| | ||| | |||| Sbjct 13844468 ---CATCTTCCAGCTGCTTACCAGCAAAGACCAGCCTCTGCTGATCAGGAGGAATTCCTT 13844412 Query 44238 CCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCG 44297 |||| ||| ||||| ||| | || |||||||||| || ||| ||||| | || Sbjct 13844411 CCTTATCCTGGATCTTGGCCTTTACATTTTCTATGGTGTCCAGGGGTTCAACCTCGAGCG 13844352 Query 44298 TAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 | || ||||| ||| | ||||||||||| || || ||||| ||| Sbjct 13844351 TGATGGTCTTCCCCATAAGGGTCTTCACAAAAATCTGCATCATG 13844308 Score = 86.0 bits (94), Expect = 5e-12 Identities = 117/160 (73%), Gaps = 5/160 (3%) Strand=Plus/Minus Query 44135 TGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGT-TGGCGCTCGTCGTCCAGCT 44192 ||||| ||| ||||||||| |||||||| || | ||| |||| | || ||||||| Sbjct 13420517 TGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAAACAAGTATGGC---CATCTTCCAGCT 13420461 Query 44193 GCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCT 44252 |||| || ||||||| || | ||||||||| | ||| | |||||||| ||| |||| Sbjct 13420460 GCTTACCAGCAAAGACCAGCCTCTGCTGATCAGGAGGAAGTCCTTCCTTATCCTGGATCT 13420401 Query 44253 TCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTC 44292 | ||| | || |||||||||| || ||| ||||| Sbjct 13420400 TGGACTTTACATTTTCTATGGTGTCCAGGGGTTCAACCTC 13420361 >seq3 Length=125065471 Score = 127 bits (140), Expect = 1e-24 Identities = 169/232 (73%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || ||||| | | |||||||| || || ||| || |||||||||||||| Sbjct 62144677 CATGCCACCCCTCAGACGGAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATC 62144618 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | ||| ||| | || || |||||||| || |||||||||| | |||||| || | Sbjct 62144617 AGAGAGGGTGCGGCCATCTTCTAGCTGCTTGCCCGCAAAGATCAGCCTCTGCTGGTCAGG 62144558 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | || || || ||| ||||| ||||| |||| | |||||||| || | Sbjct 62144557 GGGGATGCCCTCTTTATCCTGGATCTTGGCCTTCAC-GTTCTCGATGGTGTCACTGGGCT 62144499 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||||| || || ||||| || || ||||||||||||||||| ||||| Sbjct 62144498 CCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 62144447 Score = 127 bits (140), Expect = 1e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || ||||| | | |||||||| || || ||| || |||||||||||||| | | Sbjct 62144901 CCACCCCTCAGACGGAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAG 62144842 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || ||| | || || |||||||| ||||||||||||| | |||||| || | || Sbjct 62144841 AGAGTGCGGCCATCTTCTAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 62144782 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290 | || || || ||| ||||| ||||| | | |||||||| || |||||| Sbjct 62144781 ATGCCCTCTTTATCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCACC 62144722 Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 |||| || || ||||| || || ||||||||||||||||| |||||| Sbjct 62144721 TCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCATG 62144674 Score = 98.7 bits (108), Expect = 7e-16 Identities = 162/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167 || || |||| || | || ||||||||| | ||| ||| || |||||||||||||| Sbjct 98064589 ATGCCACCTCGAAGACGCAGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAATCA 98064648 Query 44168 GCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAA 44227 | || | | | || || ||||| || ||||| || |||| | |||||| || | Sbjct 98064649 GACAGGGTGTGGCCATCCTCTAGCTGTTTGCCGGCGAATATCAGCCTCTGCTGGTCAGGT 98064708 Query 44228 GGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCC 44287 || | || ||||| || ||||| ||| | | | |||||||| || || Sbjct 98064709 GGGAGGCCCTCCTTGTCTTGGATCTTGGCCTTTACATTCTCGATGGTGTCACTGGGCTCT 98064768 Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 ||||| | || || ||||| ||| | ||||||||||||||||| |||||| || Sbjct 98064769 ACCTCAAGAGTGATGGTCTTGCCCATCAGGGTCTTCACGAAGATCTGCATGTTG 98064822 >seq12 Length=182815943 Score = 125 bits (138), Expect = 5e-24 Identities = 163/222 (73%), Gaps = 4/222 (2%) Strand=Plus/Plus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 |||||||||||||| ||||| ||| ||||||||| |||||||| || ||| | || Sbjct 146741566 AGTCTCAACACCAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAA--AGTCCG-GC 146741622 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 | || | | | |||| || |||||||||| | ||||||||| | ||| | |||||| Sbjct 146741623 -CATCTTTCGGAGGCTTACCAGCAAAGATCAGCCTCTGCTGATCAGGAGGAATTCCTTCC 146741681 Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299 || ||| |||| ||| | || |||| ||||| || ||| ||||||| ||| Sbjct 146741682 TTATCCTGGGTCTTGACCTTTACATTTTCTATAGTGTCCCAGGGTTCAACCTCCAGCGTG 146741741 Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 || || || ||||| ||||||||||| || || ||||| ||| Sbjct 146741742 ATGGTTTTCCCCGTAAGGGTCTTCACAAAAATCTGCATCATG 146741783 Score = 91.5 bits (100), Expect = 1e-13 Identities = 136/190 (72%), Gaps = 6/190 (3%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 |||| | || || | ||||||||||| || ||||| || ||||||||| |||||||| Sbjct 92361990 TTTCCTACCACCACGAAGTCTCAACACGAGTTGAAGGGTAGACTCCTTTTGAATGTTGTA 92361931 Query 44164 ATCGGCGAGT-TGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGAT 44222 || ||| |||| | || ||||||||||| || ||| ||||||| | |||||||| Sbjct 92361930 GTCAA--AGTATGGC---CATCTTCCAGCTGCTTGCCAGCACAGATCAACCTCTGCTGAT 92361876 Query 44223 CTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGG 44282 | | ||| | |||| ||| | | ||||| ||| | || |||| ||||| | || Sbjct 92361875 CAGGAGGAATTCCTTTCTTATTCTGGATCTTGGCCTTTACATTTTCTATAGTGTCTGAGG 92361816 Query 44283 ATTCCACCTC 44292 ||| | ||| Sbjct 92361815 GTTCAATCTC 92361806 >seq14 Length=152946536 Score = 116 bits (128), Expect = 3e-21 Identities = 160/222 (72%), Gaps = 4/222 (2%) Strand=Plus/Plus Query 44120 AGTCTCAACACCAGGTGAAGC---GTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGG 44176 ||||||||||| |||||||| ||| |||| |||| |||||||| || | | Sbjct 128583618 AGTCTCAACACAAGGTGAAGAAGGGTGGACTCCCTTTGAATGTTGTAGTCAGACAAAGTC 128583677 Query 44177 CGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCT 44236 || | || ||||||||||| || |||||| |||| | ||||||||| | ||| | || Sbjct 128583678 CGGCCATCTTCCAGCTGCTTACCAGCAAAGGTCAACCTCTGCTGATCAGGAGGAAGTTCT 128583737 Query 44237 TCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACC 44296 ||||| ||| |||| ||| | || |||| ||||| | || ||| ||||| | | Sbjct 128583738 TCCTTATCCTGGGTCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGC 128583797 Query 44297 GTAATCGTCTT-TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || || ||| | ||||||||||| ||||| ||||| Sbjct 128583798 GTGATGGTTTTCCCCCATAAGGGTCTTCACAAAGATCTGCAT 128583839 Score = 116 bits (128), Expect = 3e-21 Identities = 161/225 (72%), Gaps = 3/225 (1%) Strand=Plus/Plus Query 44120 AGTCTCAACACCAGGTGAAGC---GTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGG 44176 ||||||||||| |||||||| ||| ||| |||| |||||||| || | | Sbjct 131976991 AGTCTCAACACAAGGTGAAGAAGGGTGGATTCCCTTTGAATGTTGTAGTCAGACAAAGTC 131977050 Query 44177 CGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCT 44236 || | || |||||| |||| || |||||| |||| | ||||||||| | ||| | ||| Sbjct 131977051 CGGCCATCTTCCAGCGGCTTACCAGCAAAGGTCAACCTCTGCTGATCAGGAGGAAGTCCT 131977110 Query 44237 TCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACC 44296 ||||| ||| |||| ||| | || |||| ||||| | || ||| ||||| | | Sbjct 131977111 TCCTTATCCTGGGTCTTGGCCTTTACATTTACTATAGTGTCCGAGGGTTCAACCTCGAGC 131977170 Query 44297 GTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 || || | ||| ||| | ||||||||||| || || ||||| ||| Sbjct 131977171 GTGATGGCCTTCCCCATAAGGGTCTTCACAAAAATCTGCATCATG 131977215 >seq15 Length=152823684 Score = 114 bits (126), Expect = 9e-21 Identities = 166/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || ||||| || | | |||||||| || ||| ||| || |||||||||||||| Sbjct 125084941 CATCCCACCTCTGAGGCGAAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAATC 125085000 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || ||| | || ||||||||||| || |||||||||| | |||||| || | Sbjct 125085001 TGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGG 125085060 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | || ||||| ||| ||||| ||| | | ||| | |||||||| || | Sbjct 125085061 GGGGATGCCCTCCTTGTCCTGGATCTT-TGCCTTGACATTCTCAATGGTGTCACTGGGCT 125085119 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | ||||||| || || ||||| || || | ||| ||||| ||||| ||||| Sbjct 125085120 CGACCTCCAGGGTGATGGTCTTACCAGTTAAGGTTTTCACAAAGATCTGCAT 125085171 >seq5 Length=117181667 Score = 109 bits (120), Expect = 4e-19 Identities = 157/218 (72%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 |||||||||||||| ||||| ||| |||| |||| |||||||| || ||| | || Sbjct 9091604 AGTCTCAACACCAGATGAAGGGTGGACTCCCTTTGAATGTTGTAGTCAA--AGTCCG-GC 9091660 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 | || ||||||||||| || ||||||| || | |||||||| | ||| | |||||| Sbjct 9091661 -CATCTTCCAGCTGCTTACCAGCAAAGACCAGCCTCTGCTGATGAGGAGGAAGTCCTTCC 9091719 Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299 || ||| |||| ||| | || || | ||||| || ||| ||||| | ||| Sbjct 9091720 TTATCCTGGGTCTTGGCCTTTATATTTTCTGTAGTGTCCCAGGGTTCAACCTCGAGCGTG 9091779 Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || || || || ||||||||||| || || ||||| Sbjct 9091780 ACAGTTTTCCCTGTAAGGGTCTTCACAAAAATCTGCAT 9091817 >seq18 Length=130317789 Score = 105 bits (116), Expect = 5e-18 Identities = 139/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 ||||||||||||| ||||| ||| ||||||||| |||||||| || | | || Sbjct 111279668 AGTCTCAACACCAAATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTCCGG 111279727 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 | || ||||||||||| || ||||||| || | ||||||||| | ||| | |||||| Sbjct 111279728 CCATCTTCCAGCTGCTTACCAGCAAAGACCAGCCTCTGCTGATCAGGAGGAATTCCTTCC 111279787 Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299 || ||| ||||| ||| | || |||| ||||| | || ||| ||||| | ||| Sbjct 111279788 TTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCAAGCGTG 111279847 Query 44300 ATCGTCTTTCCC 44311 || | |||||| Sbjct 111279848 ATGG--TTTCCC 111279857 >seq16 Length=150978388 Score = 105 bits (116), Expect = 5e-18 Identities = 154/218 (71%), Gaps = 5/218 (2%) Strand=Plus/Plus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 |||||||||||||| ||||| ||| ||||||||| |||||||| || | | || Sbjct 3200035 AGTCTCAACACCAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTCCGT 3200094 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 | || ||||||||||| || ||||||| || | ||||||||| | ||| | | Sbjct 3200095 CCATCTTCCAGCTGCTTACCAGCAAAGACCAGCCTCTGCTGATCAGGAGGAA-----GTC 3200149 Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299 || ||| ||||| ||| | || |||| | ||| | || ||| |||| | || Sbjct 3200150 TTATCCTGGATCTTGGCCTTTACATTTTCTATAGAGTCTGAGGGTTCAACCTGGAGTGTG 3200209 Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || ||||| ||||||||||| || || ||||| Sbjct 3200210 ATGGTTTTCCCCGTAAGGGTCTTCACAAAAATCTGCAT 3200247 Score = 96.9 bits (106), Expect = 2e-15 Identities = 134/185 (72%), Gaps = 2/185 (1%) Strand=Plus/Plus Query 44154 GGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAAC 44213 ||||||||||||| | ||| ||| | || || |||||||| || |||||||||| | Sbjct 58879368 GGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCTAGCTGCTTGCCAGCAAAGATCAGCC 58879427 Query 44214 GCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATG 44272 |||||| | | || | || || || ||| ||||| |||| | |||| ||||| Sbjct 58879428 TCTGCTGGTAAGGGGGAATGCCCTCTTTATCCTGGATCTTGGCCTTC-ACGTTCTCTATG 58879486 Query 44273 GTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATT 44332 ||||| || |||||||| | || || ||||| || || |||||||||| ||||| Sbjct 58879487 GTGTCACTGGGCTCCACCTCTAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAGAAAGATC 58879546 Query 44333 TGCAT 44337 ||||| Sbjct 58879547 TGCAT 58879551 >seq11 Length=59623150 Score = 100 bits (110), Expect = 2e-16 Identities = 150/212 (71%), Gaps = 1/212 (0%) Strand=Plus/Minus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 |||||||||||||| ||||| || ||||||||| |||||||| || | | || Sbjct 13412278 AGTCTCAACACCAGATGAAGGGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTCCGG 13412219 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 | || ||||||| ||| || ||||||| || | |||||||| | | | | |||||| Sbjct 13412218 CCATCTTCCAGCT-CTTACCAGCAAAGACCAGCCTCTGCTGATGAGGAAGAATTCCTTCC 13412160 Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299 || ||| |||| ||| | || |||| ||||| | || ||| ||||| | ||| Sbjct 13412159 TTGTCCTGGGTCTTGACCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGCGTG 13412100 Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGAT 44331 || || || ||| | ||||||||| | || || Sbjct 13412099 ATGGTTTTCCCCATTAGGGTCTTCTCAAAAAT 13412068 Score = 100 bits (110), Expect = 2e-16 Identities = 150/212 (71%), Gaps = 1/212 (0%) Strand=Plus/Minus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 |||||||||||||| ||||| || ||||||||| |||||||| || | | || Sbjct 13413229 AGTCTCAACACCAGATGAAGGGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTCCGG 13413170 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 | || ||||||| ||| || ||||||| || | |||||||| | | | | |||||| Sbjct 13413169 CCATCTTCCAGCT-CTTACCAGCAAAGACCAGCCTCTGCTGATGAGGAAGAATTCCTTCC 13413111 Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299 || ||| |||| ||| | || |||| ||||| | || ||| ||||| | ||| Sbjct 13413110 TTGTCCTGGGTCTTGACCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGCGTG 13413051 Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGAT 44331 || || || ||| | ||||||||| | || || Sbjct 13413050 ATGGTTTTCCCCATTAGGGTCTTCTCAAAAAT 13413019 >seq6 Length=117542938 Score = 98.7 bits (108), Expect = 7e-16 Identities = 156/227 (69%), Gaps = 14/227 (6%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || |||| |||||||||||||| ||||| ||| ||||||||| |||||||| || | Sbjct 35538740 CCACCTCGAAGTCTCAACACCAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGAC 35538799 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 | || | || ||||||||||| || |||||||||| | ||||||||| | ||| Sbjct 35538800 AAAGTACGGCCATCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCAGGAGGA 35538859 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290 | ||||||| ||| |||| ||| | || |||| ||||| | || Sbjct 35538860 AGTTCTTCCTTATCCTGGGTCTTGGCCTTTACATTTTCTATAGTGTCCGAGG-------- 35538911 Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || || || || ||||||||||| || || ||||| Sbjct 35538912 ------GTGATGGTTTTCCCTGTAAGGGTCTTCACAAAAATCTGCAT 35538952 >seq20 Length=148322235 Score = 89.7 bits (98), Expect = 4e-13 Identities = 146/209 (70%), Gaps = 1/209 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||||||| || || ||| || |||||||||||||| | || ||| | || ||| Sbjct 135500346 ACCAGGTGCAGGGTCAACTCTTTCTGGATGTTGTAATCAGAGAAGGTGCGGCCATCTTCC 135500405 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| || |||||||| | | |||||| || | | | || || || ||| Sbjct 135500406 AGTTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTC-GGGGTGATGCCCTCTTTATCCTGG 135500464 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||||| | | ||||| || || |||| ||| | || || ||||| Sbjct 135500465 ATCTTGGCCTTCACATTCTCGATGGTTTCACTGGGCTCCATCTCTAGGGTGATGGTCTTG 135500524 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || ||||||||| ||||||||||||| Sbjct 135500525 CCAGTCAGGGTCTTCTCGAAGATTTGCAT 135500553 >seq10 Length=90668104 Score = 87.8 bits (96), Expect = 1e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 44119 CAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCG 44178 ||| | || ||||||||| | ||| ||| || ||||||||||| |||| || ||| Sbjct 33660458 CAGGCGCAGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCG 33660517 Query 44179 CTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTC 44238 | || |||||||| || || | || |||| | |||||| || | ||| | ||||| Sbjct 33660518 GCCATCCTCCAGCTGTTTGCCCGAGAATATCAGCCTCTGCTGGTCAGGAGGGATGCCTTC 33660577 Query 44239 CTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGT 44298 ||| || ||||| ||| | | | |||||||| || || ||||| | || Sbjct 33660578 CTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCGACCTCAAGAGT 33660637 Query 44299 AATCGTCTTTCCCGTGAGGGTCTTCA 44324 || ||||| ||||| |||||||||| Sbjct 33660638 GATGGTCTTGCCCGTCAGGGTCTTCA 33660663 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359966690582268