Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myodes_20glareolus_20[genbank_20GCA_5F001305785.1_202015-10-02] 367,242 sequences; 3,443,072,068 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq9155 91.5 9e-14 >seq9155 Length=358325 Score = 91.5 bits (100), Expect = 9e-14 Identities = 152/220 (69%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 34170 GCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGAC 34229 |||| | ||||||||||| ||||| |||||||| ||||||| ||| ||||| Sbjct 307806 GCAGACGAAGCACCAGGTGCAAAGTGGGCTCTTTCTGGATGTTGTGGTCAGACAGGGTCT 307747 Query 34230 GGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCT 34289 || | || |||| ||||||||| || || || || | |||||||| || | || | Sbjct 307746 GGCCATCCTCCAGCTGCTTGCCGGCAAATATCAGTCTTTGCTGGTCAGGTGGGATGCCTT 307687 Query 34290 CCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCG 34349 ||||||| ||||| ||| | || | || | || | | | ||| || | | Sbjct 307686 CCTTGTCTTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTTGACCTCAAGAG 307627 Query 34350 TGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | ||||| ||||| || || || ||||||||||| ||||| Sbjct 307626 TAATGGTCTTGCCCGTCAGGGTCTTCACAAAGATATGCAT 307587 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 321626006659520