Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myodes_20glareolus_20[genbank_20GCA_5F001305785.1_202015-10-02] 367,242 sequences; 3,443,072,068 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq303837 122 7e-23 >seq303837 Length=344 Score = 122 bits (134), Expect = 7e-23 Identities = 124/162 (77%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 20991 AGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGG 21050 ||||| |||| ||| || |||| || || || ||||| |||||||| ||||| || || Sbjct 84 AGGCCTGTGATGTGTGCAATCATGTAGGTGAGCAGGGCATAGCTGGCAATGTTGAAGGGC 143 Query 21051 ACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCC 21110 || || |||||||| || | ||||||||||| |||||||| ||||||||||| || Sbjct 144 ACGCCCAGGCCCATATCTCCTGACCTCTGGTAGAGCTGGCAAGACAGCTCCCCATTCGCT 203 Query 21111 ACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATC 21152 || || || ||||| | | || |||||||| || |||||| Sbjct 204 ACATAGAATTGACAGAGGGCATGGCAAGGAGGCAGTGCCATC 245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425861376488160