Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myodes_20glareolus_20[genbank_20GCA_5F001305785.1_202015-10-02] 367,242 sequences; 3,443,072,068 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq303837 89.7 3e-13 >seq303837 Length=344 Score = 89.7 bits (98), Expect = 3e-13 Identities = 123/168 (73%), Gaps = 3/168 (2%) Strand=Plus/Plus Query 25490 TAGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGG 25549 ||| || || | || || |||||||| ||||| || |||||||| ||||| ||||| Sbjct 83 TAGGCCTGTGATGTGTGCAATCATGTAGGTGAGCAGGGCATAGCTGGCAATGTTGAAGGG 142 Query 25550 TACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTC-GTCG 25608 || || | ||||| || || ||||||||||||||||| || || ||||| | ||| Sbjct 143 CACGCCCAGGCCCATATCTCCT-GACCTCTGGTAGAGCTGGCAAGACAGCTCCCCATTCG 201 Query 25609 CTCACGTAAAACTGACACATGGTGTAGCACGGAGGAAGAGCTATAAGG 25656 || || || || ||||| | || | ||| ||||| || || || ||| Sbjct 202 CT-ACATAGAATTGACAGAGGGCATGGCAAGGAGGCAGTGCCATCAGG 248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338615225097666