Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myodes_20glareolus_20[genbank_20GCA_5F001305785.1_202015-10-02] 367,242 sequences; 3,443,072,068 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq53448 84.2 2e-11 >seq53448 Length=237101 Score = 84.2 bits (92), Expect = 2e-11 Identities = 93/124 (75%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 21498 CTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCCTCTCTTTT 21557 |||||||||| || || | |||||| || || || | |||||||| | |||||||| | Sbjct 207263 CTTCATCCCTGCTGATCAGTTCATTTGAGAAAGTGAGTCCGGGCATGAGGCCTCTCTTCT 207204 Query 21558 TTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCTCAACGGCAGCAAATG 21617 | | ||| || || | ||||| | || || ||||||| ||| || ||||||||||| | Sbjct 207203 TCAGCCAGAAGATAGCAGCAAAGGACCCAGAGAAGAAAACGCCTTCCACGGCAGCAAAGG 207144 Query 21618 CAAC 21621 | || Sbjct 207143 CCAC 207140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 529459096080080