Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myodes_20glareolus_20[genbank_20GCA_5F001305785.1_202015-10-02] 367,242 sequences; 3,443,072,068 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq303837 105 6e-18 >seq303837 Length=344 Score = 105 bits (116), Expect = 6e-18 Identities = 114/151 (75%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 20249 TGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCC 20308 || |||| ||| || || | |||| ||||||||||||||| || || || |||| ||| Sbjct 96 TGTGCAATCATGTAGGTGAGCAGGGCATAGCTGGCAATGTTGAAGGGCACGCCCAGGCCC 155 Query 20309 ATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTGA 20368 || ||||| |||||||| || ||||| || || ||||| || | |||||||| |||||| Sbjct 156 ATATCTCCTGACCTCTGGTAGAGCTGGCAAGACAGCTCCCCATTCGCTACATAGAATTGA 215 Query 20369 CATAACAAGTGACAGGGCGGAAGCGCCATCA 20399 || | || || || || || ||||||| Sbjct 216 CAGAGGGCATGGCAAGGAGGCAGTGCCATCA 246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 439346667127280