Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myodes_20glareolus_20[genbank_20GCA_5F001305785.1_202015-10-02] 367,242 sequences; 3,443,072,068 total letters Query= NC_015049.1 Length=124335 Score E Sequences producing significant alignments: (Bits) Value seq151497 84.2 2e-11 >seq151497 Length=1998 Score = 84.2 bits (92), Expect = 2e-11 Identities = 123/174 (71%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 781 TCTAATTTCCTTTTAGAAATTTGAGAGGACATGTCTCTAGCGGTCCAGGTCCTGAGATCT 840 ||||| || | ||||| || ||||||| |||| | |||||||||| | || || Sbjct 1916 TCTAACTTGCACTTAGAGATCTGAGAGGCTGTGTCAGTTGCGGTCCAGGAGCACAGGTCC 1857 Query 841 TCATTCAAAGAAATGTAGTCCCTGCCATCATAGGCCTGTTGACAGTAGCCTCGAAGGAGG 900 ||||||| | || || | || ||||||||||||| |||||| | || || || ||| Sbjct 1856 TCATTCAGGAAGATATAATTCCGCCCATCATAGGCCTCCTGACAGGACCCGCGGAGCAGG 1797 Query 901 GTTCCATCCGGCCCCACAACACAGCCGGACATCCATTGGAGGGTATGTGGTTCT 954 |||||| || | || |||| || ||||||| || || || || ||||| Sbjct 1796 CGTCCATCTGGACTCAGGTCACAACCATACATCCACTGCAGAGTGTGAAGTTCT 1743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395966978246352