Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myodes_20glareolus_20[genbank_20GCA_5F001305785.1_202015-10-02] 367,242 sequences; 3,443,072,068 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq2435 86.0 8e-12 >seq2435 Length=1383846 Score = 86.0 bits (94), Expect = 8e-12 Identities = 73/90 (81%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 48075 ACCATAAGGAGAACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTT 48134 |||||| || || | |||||||||||||||||||||| |||| || | || ||||| || Sbjct 1004476 ACCATATGGTGACCTTGGATAGAAAGGTGTGGTCTCTTTCTGGGGTATTTCCTGCACTTT 1004417 Query 48135 ACCATAAAGTTCACTGGTGGATGCTTGATA 48164 ||||| |||||||| || || ||||| || Sbjct 1004416 TCCATATAGTTCACTTGTTGAGGCTTGGTA 1004387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 662439431319440