Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myodes_20glareolus_20[genbank_20GCA_5F001305785.1_202015-10-02] 367,242 sequences; 3,443,072,068 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq2536 84.2 4e-11 >seq2536 Length=684130 Score = 84.2 bits (92), Expect = 4e-11 Identities = 121/171 (71%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 58369 GATAGCCAGAGCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGT 58428 |||||| | || ||||||||||||| | |||| ||||| | || || || ||||| || Sbjct 666629 GATAGCTGGTGCCTTATGGTGGTACTTTGTATCAAAAGGAGTGGAGTATTTGGATACTGT 666688 Query 58429 GTTTTTCATACTTAGGAAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTT 58488 ||||||||| || ||||| || || || || || || ||||| || ||||| | Sbjct 666689 GTTTTTCATCCTGAGGAAGAAAAACAACCAGGTCTCTTTCCTTCACGTGTACCATCACTG 666748 Query 58489 TACTATGTTTACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCA 58539 || ||||| || | | ||| | || || || ||| | ||||| || || Sbjct 666749 CACCATGTTCACACTGTGGTGGATCGGAATCAAGTGGGTGGCAGGTGGCCA 666799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899264068301120