Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myodes_20glareolus_20[genbank_20GCA_5F001305785.1_202015-10-02] 367,242 sequences; 3,443,072,068 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq303837 120 2e-22 >seq303837 Length=344 Score = 120 bits (132), Expect = 2e-22 Identities = 122/159 (77%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 111778 CCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACA 111837 || |||||||||||||||||||| ||||| || || || |||||||| || ||||| Sbjct 87 CCTGTGATGTGTGCAATCATGTAGGTGAGCAGGGCATAGCTGGCAATGTTGAAGGGCACG 146 Query 111838 CCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGACACA 111897 || |||||||||||||| || || || || ||||| || || || | | | ||| Sbjct 147 CCCAGGCCCATATCTCCTGACCTCTGGTAGAGCTGGCAAGACAGCTCCCCATTCGCTACA 206 Query 111898 TAAAATTGACAAAGTACATGACAAGGAGGCAATGCCATC 111936 || |||||||| || |||| |||||||||| ||||||| Sbjct 207 TAGAATTGACAGAGGGCATGGCAAGGAGGCAGTGCCATC 245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 390191344826446