Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myodes_20glareolus_20[genbank_20GCA_5F001305785.1_202015-10-02] 367,242 sequences; 3,443,072,068 total letters Query= NC_031224.1 Length=59443 Score E Sequences producing significant alignments: (Bits) Value seq303837 93.3 2e-14 >seq303837 Length=344 Score = 93.3 bits (102), Expect = 2e-14 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 52110 ATGGCGTTGGCTCCCTGCCATACACTATTCCAATTCTATGTAGCTGAAGGTAAGCTTTCG 52169 ||||| || |||| |||||| | || | |||||||||||||| | || |||| || Sbjct 244 ATGGCACTGCCTCCTTGCCATGCCCTCTGTCAATTCTATGTAGCGAATGGGGAGCTGTCT 185 Query 52170 TGCCATTTGTATCAGCGGTCTGCCGACATGTTCTTGGGCGTTCCGTTTAACATTGCCAGC 52229 ||||| | || ||| |||| | || ||| | ||||||| || || |||||||||||| Sbjct 184 TGCCAGCTCTACCAGAGGTCAGGAGATATGGGCCTGGGCGTGCCCTTCAACATTGCCAGC 125 Query 52230 TATTCCTTGCTGACGCATCTGATTGC 52255 ||| || |||| || | ||||||| Sbjct 124 TATGCCCTGCTCACCTACATGATTGC 99 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 189266991581620