Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannospalax_20galili_20[refseq_20GCF_5F000622305.1_202014-06-05] 154,976 sequences; 3,061,424,619 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq26070 86.0 1e-11 >seq26070 Length=15207027 Score = 86.0 bits (94), Expect = 1e-11 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 101916 TTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCT 101975 |||| || |||||||| || ||||||||||||||| |||| | || ||||| || || | Sbjct 5605470 TTGTAGCTTTTGCTGCTGTGGAAGGAATCTTCTTTTCTGGTTCCTTTGCATCAATATTTT 5605411 Query 101976 GGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAG 102022 || ||||||| | || | |||||||||| || | ||||||||| Sbjct 5605410 GGCTCAAGAAACGAGGACTGATGCCTGGTCTTACATTTTCCAATGAG 5605364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 987619052322080