Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannospalax_20galili_20[refseq_20GCF_5F000622305.1_202014-06-05] 154,976 sequences; 3,061,424,619 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq14035 98.7 7e-16 >seq14035 Length=1410301 Score = 98.7 bits (108), Expect = 7e-16 Identities = 119/162 (73%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 22761 TGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTGAAGAAACGTTC 22820 ||| ||||| || | |||||||| || ||||| | ||||||||||| |||||| | Sbjct 226027 TGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCAATATTCTGGCTCAAGAAATGAGG 226086 Query 22821 GCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAAGGTCTACACTG 22880 || ||||| || | | |||||||| || | || ||| | || || ||| | ||||| Sbjct 226087 ACTGATGCCCGGCCTCACATTTTCCAATGAACTTATCAGCAGAGATGAGGGTTTGCACTG 226146 Query 22881 TGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAACC 22922 ||||||||| ||| || |||| | ||| ||| | ||||||| Sbjct 226147 TGACTTTGCCTGTCTGATGTTCAAGCACCTGGTACACAAACC 226188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355560756663328