Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannospalax_20galili_20[refseq_20GCF_5F000622305.1_202014-06-05] 154,976 sequences; 3,061,424,619 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq14035 260 2e-64 seq13819 172 7e-38 seq32167 167 3e-36 seq29155 125 1e-23 seq30635 120 4e-22 seq26070 114 2e-20 seq2702 93.3 6e-14 >seq14035 Length=1410301 Score = 260 bits (288), Expect = 2e-64 Identities = 534/781 (68%), Gaps = 37/781 (5%) Strand=Plus/Minus Query 41759 GACATAACTCCCATTTT-TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCC 41817 ||||| ||||| || | ||| |||||||| || | ||||| || || || ||||| || Sbjct 226469 GACATCACTCCTATCCTCTTGATATTCACCTACTCTCTTTTCAAAGAAGTTGGTCTTCCC 226410 Query 41818 TTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAA 41877 ||||| ||| |||||||||||||| ||||| ||||| || | |||| | ||||| Sbjct 226409 TTCCAGTGAAATATTTTCCATGAAGTCAAATGGATTTTCTACTCTGAAAATCCTGTTAAA 226350 Query 41878 TCCCAATTCAGAAATCAATCTATCTGCGATGAATTCTATATATGTTTTCA--TCATTTCA 41935 |||| || || | || ||||| | ||||| | | | || ||||| | Sbjct 226349 GCCCAGCTCGAGCATAAGCCTGTCTGCCACAAATTCAGTGTG-GCCACCACGTCATTAAA 226291 Query 41936 ---CAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATA 41992 || ||||| || || ||||| || || | |||| | | || | || || | || Sbjct 226290 GTGCAGTTCATCCCAATGAGTTTCACAGGCAAAGCCTCCATGAGGAGCTCCTGCCCTATC 226231 Query 41993 GAGACCGCGTCTGTTATAATAGATC---TTACTGTTTCTTCACTCGGTGGATACAATAAA 42049 || || | | ||||| | | ||||| | | || ||| | | | Sbjct 226230 CTCACAGCCT---TGATAATGGTTTCCTTTACTCTCTGCTCTGATGGTTTGTGTACCAGG 226174 Query 42050 TGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCG 42109 || || ||||||| ||| || || || ||||||| |||||||||||| || || | ||| Sbjct 226173 TGCTTGAACATCAGACAGGCAAAGTCACAGTGCAAACCCTCATCTCTGCTGATAAGTTCA 226114 Query 42110 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAAT 42169 |||||||| ||||| |||||||| || || | || || ||||| ||||| || ||||| Sbjct 226113 TTGGAAAATGTGAGGCCGGGCATCAGTCCTCATTTCTTGAGCCAGAATATTGATGCAAAA 226054 Query 42170 GATCCAGAAAAGAAGATTCCTTCTAC--TGCCGCAAAG--GCAATAAGTCTCTCTCCATA 42225 || |||||||||||||||||||| || ||| |||| |||| | || |||||||| Sbjct 226053 GAACCAGAAAAGAAGATTCCTTCCACAATGC--AAAAGCTGCAACACGT---TCTCCATA 225999 Query 42226 ACCGGCACTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCAT 42285 ||| || ||| | || | ||||| || |||||| || ||||||||||| Sbjct 225998 ---TGCAGCTTCTTGTCCCAACGCAAG-GCCCAGTCAGCCTTC---TTCACACAAGGCAT 225946 Query 42286 CGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGAT 42345 |||||| ||| ||||||||||| | | |||| || ||||||| |||| || || Sbjct 225945 CGTTTCAATGACATTAAAGAGAAATTCCCTTTCTTTGGAATCTTTA----ATGTGTCAAT 225890 Query 42346 CAAAAGACTATACATTTCTGA----ATGAATGTTTTCAATGGCCATCTGAAATCCGTAGA 42401 | |||||| ||| |||| || || || |||||| | ||| | || | || |||| Sbjct 225889 AAGAAGACTGTACGTTTCGGAACGTATAAAAGTTTTCCAAGGCAAGTTGGAGGCCATAGA 225830 Query 42402 AACATCTGGCCTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCA 42461 |||| | ||| || |||| | | |||| | |||| || | || ||||| || | Sbjct 225829 AACAGCGGGCTTCCGTAATTTAAAATTCTTGGCTGAATCACTCCACCAAGTTTTCATTTA 225770 Query 42462 CTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCG 42521 |||| || ||||| |||||||| || |||| ||||| |||||||| | | || |||| Sbjct 225769 CTATGCCATCACTCGCTGCAAAGAAAGCCAGAACATGGGATATAAAATCTCTCTCTTCCG 225710 Query 42522 G 42522 | Sbjct 225709 G 225709 >seq13819 Length=2138633 Score = 172 bits (190), Expect = 7e-38 Identities = 395/588 (67%), Gaps = 15/588 (3%) Strand=Plus/Minus Query 42050 TGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCG 42109 || || ||||||| ||| || || || |||||| |||||||||||| ||| | || Sbjct 1575464 TGCTTGAACATCAGACAGGCAAAGTCATAGTGCAAACCCTCATCTCTG-TAAAAAGCTCA 1575406 Query 42110 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAAT 42169 | ||||||||| || | |||||| || || | |||| | || |||| || |||| Sbjct 1575405 TCGGAAAACGTAAGACTGGGCATCAGTCCTCAGGTTTTGAATCAGAATAATTACACAAAA 1575346 Query 42170 GATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCG 42229 | ||||| |||||||||||||| | | ||||||| | || | | || | | | Sbjct 1575345 TAACCAGAGAAGAAGATTCCTTCCTCAGTGACAAAGGCTACAA-TGTAGCTTCTTTGTCC 1575287 Query 42230 GCACTGTCATGTATCCACTTTTGAGCCCAA-TCGGCCTTCTTTTTTACACAAGGCATCGT 42288 || ||| | ||| || |||| || ||||||| || | | |||||| | Sbjct 1575286 CCA--GTCCAGC--CCA------AGACCAAGTCTCCCTTCTTCTTCATAGGAGGCATTCT 1575237 Query 42289 TTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAA 42348 ||| ||| |||| || ||| | | ||||| | ||||||| || || || | | Sbjct 1575236 TTCAATGCCATTGAAAAGAAATTCCTTTTCTCTGGAATCTTTAGGGTAAGTGTCAACAAG 1575177 Query 42349 AAGACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCT 42408 ||||| |||||||| ||||| |||||||| |||| || || || || |||||||| | Sbjct 1575176 AAGACAGTACATTTCAGAATGTATGTTTTCCGTGGCAATTTGGAAGCCATAGAAACAGCG 1575117 Query 42409 GGCCTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCC 42468 ||| | |||| || |||||| | ||||| || ||| ||||| || ||| | Sbjct 1575116 GGCTTATGTAATTTGAACTTCTTGGCTGAATCGCTCCACTACGTTTTCATTTACTGTGTG 1575057 Query 42469 GTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAA 42528 ||| || ||| |||| | |||| | || || ||||||| | || || ||| | | Sbjct 1575056 GTCGCTCGCTTCAAAGGAAGCCAGAA--TGAGATACAAAATATCTCTCTTCGGGTTTCAG 1574999 Query 42529 TTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGC 42588 | ||| | | ||| || || || | |||||| || || | ||||||| | | Sbjct 1574998 GGCTTCCCAGTGCTGGATGTCCTTGGAGAGATCTACCTCCTCAGCTGTCCAAACGGGGTC 1574939 Query 42589 TTCTGCCTTTTTATACATATTCCAGATATCATGATATTGAATTGGGAA 42636 | || || || ||||| ||||||||||||||||||| | | ||||| Sbjct 1574938 CTTAGCTTTCTTGTACATCTTCCAGATATCATGATATTCACTGGGGAA 1574891 >seq32167 Length=1788516 Score = 167 bits (184), Expect = 3e-36 Identities = 344/510 (67%), Gaps = 29/510 (6%) Strand=Plus/Plus Query 70786 TTTTCCTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTAC 70845 |||||||| || | |||||||| || ||| | ||| | | | || | || ||| Sbjct 592550 TTTTCCTTATCTAGAGTAAACTGGATTGGATTAGCTGCAGGTCTTGTT----GTTAATAC 592605 Query 70846 ATGCCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAG 70905 || || || |||| ||| | |||| || ||||| |||||||| | |||||| |||| Sbjct 592606 ATCCCAGTCTTTAAACCCTGCTTCCAGCCATAAAAGTGCATACTGATGAGTTTGCCATAG 592665 Query 70906 CTAGGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCT 70965 |||| || | || | || |||| ||||| |||||||| ||||| || || || | | Sbjct 592666 TTAGGCTCAGTGATACGGATGTTCAGAGACTGGCTTTGATCAATGAAAGCACCTCTCT-T 592724 Query 70966 GCAG-CCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTT 71024 | | ||||||| | || || || || | |||||| | | ||| ||||||| | || Sbjct 592725 GAATACCATTTTGAGGACAGTTTTCTGAGAGATTTCCTACACAGTCTTATAAAGCTGATT 592784 Query 71025 AATATCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCAATAATCCTA-T 71080 | || || |||| | || | ||||| || ||||| ||||||| || | Sbjct 592785 CAGGTCATCAGGAATTTCTGATATGTTCTGGATAAATCCATTGCATGCAATACTCTGGGT 592844 Query 71081 TTTTG------------ATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGA 71128 ||||| |||||||||||| | | | | |||| || | || | Sbjct 592845 TTTTGTTTTTTTTTTAAATCTCTTCATTCAAGATT-------CCAATAAATCTTTCAGTA 592897 Query 71129 GATGAGGATTAACTACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGG 71188 ||||||| || | ||||||||||| |||| ||||| | ||||| || || |||| Sbjct 592898 AGTGAGGATATACAATCTGAAATTCTCCTAACAAAACTCTTCAAGTGTGGATGTTGCTGG 592957 Query 71189 TATACGGTTCCACTGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAG 71248 |||| |||| | ||||||||||| |||| ||| ||||||||||| ||||| ||||| Sbjct 592958 TATAACGTTCAATAGACTCATTATTCCCCAGAATCTGAGCAGTTGAAGCAGTAGGCATCA 593017 Query 71249 GTGCCACCAATAGACTATTTCTAAGACCAT 71278 | || | | || ||| ||||| | ||||| Sbjct 593018 GGGCAATAAGTAAACTGTTTCTTATACCAT 593047 >seq29155 Length=1778819 Score = 125 bits (138), Expect = 1e-23 Identities = 110/137 (80%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 71142 TACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCAC 71201 ||| ||||||||||| ||||| ||||| |||||||| || |||||||| || ||||| | Sbjct 1091681 TACCTGAAATTCTCCCGACAAAACTCTGCGAGTGTAGATGTTACTGGTGTAAGGTTCAAT 1091622 Query 71202 TGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAG 71261 ||||||||||| || | ||| ||||||||||| ||||| ||||| || || | | || Sbjct 1091621 GGACTCATTATTCCCTAGAATCTGAGCAGTTGAGGCAGTAGGCATTGGGGCAATAAGTAA 1091562 Query 71262 ACTATTTCTAAGACCAT 71278 ||| ||||| | ||||| Sbjct 1091561 ACTGTTTCTTATACCAT 1091545 Score = 113 bits (124), Expect = 6e-20 Identities = 139/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 71381 CATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCAT 71440 |||| || ||||| || || | | | |||||| ||||| || ||||| | ||||||| Sbjct 1088819 CATAAGTTTCGTAGGGGCCATGCTCCTTGGCTAGGTCACAGCTGGCCTCCAGGGCTCCAT 1088760 Query 71441 AATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGAT 71500 ||||||| |||||||| |||| |||||| | ||| ||||| | || ||||| |||| Sbjct 1088759 AATAAATAGTTTCGAAGATCTGCTTATTCAATAATTGAGCTTCTTGACTCTCAAAAGGAT 1088700 Query 71501 AATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTC 71560 | | | || ||||| || ||||||| ||||| || ||||| || || || | ||| | Sbjct 1088699 ATCTCATCAGGATAAAAGCATCTGCTAGACCTTGTACCCCAATTCCAATGGGCCGGTGGC 1088640 Query 71561 TCTTATTAGA 71570 ||||| || Sbjct 1088639 GTTTATTTGA 1088630 Score = 111 bits (122), Expect = 2e-19 Identities = 127/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 70868 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATGTGAATAT 70927 |||| || |||||||||||||| || |||||| |||| |||| || || || || || | Sbjct 1094720 TCCAGCCATAAAAATGCATACTGGTGAGTTTGCCATAGTTAGGTTCAGCAATATGGATGT 1094661 Query 70928 TCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 70987 | | ||||| |||||||| ||||| || || || || || |||||||| | | || | Sbjct 1094660 TTAGAGACTGGCTTTGATCAATGAAAGCACCTCTCTCGGCTGCCATTTTGAGAACAGTTT 1094601 Query 70988 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 71038 | || | |||||||| | ||| ||||||| | |||| | || || |||| Sbjct 1094600 TCTGAGAGATTTCCCACACAGTCTTATAAAGTTGCTTCAGGTCATCAGGAA 1094550 Score = 102 bits (112), Expect = 1e-16 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 72022 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 72081 ||||||||||| |||||||| |||||||| || || | || ||||||| || | ||| Sbjct 1083468 ACTCGTTTCATGAAGAGATCTGGAATCCAGAGGGCAAAGAAAAGATCTCGGGCACGTTGC 1083409 Query 72082 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 72141 || || |||||||| |||||||| | || |||||| | | || || ||||||| ||| Sbjct 1083408 TCTTCCTTTCCTGTGTTCTTTTTTAAGTCAAGGAACTCAAAGATGTCTAAATGCCAAGGT 1083349 Query 72142 TCCAAGTATATGGC 72155 |||| ||| || || Sbjct 1083348 TCCAGGTAAATAGC 1083335 Score = 100 bits (110), Expect = 4e-16 Identities = 105/138 (76%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 72418 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTG 72477 || || ||||| || | |||||||||||||| |||||||| || ||||| || || ||| Sbjct 1075800 GTACCAGCATTGAAGAGAGTAGGAGAAGCGTGTGTAAACCACTTCTCAGAAAGAAGGTTG 1075741 Query 72478 TACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAAC 72537 ||||| ||||| || | || ||||| || || || || || | || | ||| ||| Sbjct 1075740 TACGTTTCAATTGCAGCGTCAATATCTTCTTTGTGAATCCCCACAGACACCCTCATCAAC 1075681 Query 72538 ATATGCTGAGGTCTTTCA 72555 |||||||| ||||||||| Sbjct 1075680 ATATGCTGTGGTCTTTCA 1075663 >seq30635 Length=1530594 Score = 120 bits (132), Expect = 4e-22 Identities = 98/119 (82%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 42089 TCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 42148 |||||||| || || | ||| || ||||| |||||||| ||||| || || | || || Sbjct 527667 TCATCTCTGCTGATCAGTTCATTTGAAAAAGTGAGTCCAGGCATGAGACCTCTTTTCTTT 527608 Query 42149 AGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGC 42207 ||||||||||||| ||||||||||| |||||||| ||||||||||| || |||||||| Sbjct 527607 AGCCAAAATATAGCAGCAAATGATCCGGAAAAGAAAATTCCTTCTACAGCAGCAAAGGC 527549 >seq26070 Length=15207027 Score = 114 bits (126), Expect = 2e-20 Identities = 98/121 (81%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 42087 CCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 42146 ||||||||||||| || | || |||||||| || || || ||||| || || || || | Sbjct 5605345 CCTCATCTCTACTGATAAGCTCATTGGAAAATGTAAGACCAGGCATCAGTCCTCGTTTCT 5605404 Query 42147 TAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGG 42206 | ||||||||||| || ||||| || |||||||||||||||||||| || || ||||| | Sbjct 5605405 TGAGCCAAAATATTGATGCAAAGGAACCAGAAAAGAAGATTCCTTCCACAGCAGCAAAAG 5605464 Query 42207 C 42207 | Sbjct 5605465 C 5605465 Score = 86.0 bits (94), Expect = 8e-12 Identities = 102/138 (74%), Gaps = 3/138 (2%) Strand=Plus/Plus Query 41719 TTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTTT 41775 ||| |||||| |||| || | ||| ||| ||| || ||||| |||||||| | Sbjct 5603743 TTAGAAGTCAGCATCCAAGGTGAAAGAATTCTCTGTCGGACTTGACATCACTCCCATCCT 5603802 Query 41776 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTTTC 41835 || ||||| || || | || || || || || ||||| ||||||| ||| |||||||| Sbjct 5603803 CTGATATTCCCCTACTCTCTTCTCAAAGAAGTTGGTCTTCCCTTCCAGTGAAATATTTTC 5603862 Query 41836 CATGAAATCAAACGGATT 41853 |||||| ||||| ||||| Sbjct 5603863 CATGAAGTCAAATGGATT 5603880 >seq2702 Length=368809 Score = 93.3 bits (102), Expect = 6e-14 Identities = 299/468 (64%), Gaps = 57/468 (12%) Strand=Plus/Plus Query 42050 TGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCG 42109 || || ||||||| ||| || || || ||||| | |||||||||||| || || | || Sbjct 317473 TGCTTGAACATCAGACAGGCAAAGTCACAGTGTAAACCCTCATCTCTGCTGATAAGCTCT 317532 Query 42110 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAAT 42169 |||||||| || || || ||||| || | || ||||| Sbjct 317533 TTGGAAAATGT----------------------TTCTTGAGCCAGAACAGTGATGCAAAA 317570 Query 42170 GATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCG 42229 || |||||||||||||||||||| || || ||||| || | || |||||||| Sbjct 317571 GAACCAGAAAAGAAGATTCCTTCGACAGCAGCAAAAGCTACAACATGTTCTCCATAG--- 317627 Query 42230 GCACTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCA---TC 42286 ||| | |||| | ||||||| | || ||| | Sbjct 317628 ----------GTAGCTTCTTT-GTCCCCAATCCA-----------ATGCAGGGCCCAGTT 317665 Query 42287 GTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATC 42346 ||||| |||||||| |||||| | | |||| || |||||||| || || || || Sbjct 317666 GTTTCAATGGCATTGAAGAGAAATTCCCTTTCGTTGGAATCTTTAATGTAAGTGTCAATA 317725 Query 42347 AAAAGACTATACATTTCTGAATG--AATGTTTTCAATGGCCATCTGAAATCCGTAGAAAC 42404 ||||||||||||||| ||||| || |||| ||||| || || || || ||||||| Sbjct 317726 CGAAGACTATACATTTCAGAATGGCAA---TTTCCATGGCAATTTGGAAGCCATAGAAAC 317782 Query 42405 ATCTGGCCTCGGTAACCTGTACTTCTGTACAAAATCG-TTCAGCTAAATTTTCGTTCACT 42463 | || || ||| || |||||| | ||| | | || | || ||||| || ||| Sbjct 317783 AGTAGGTTTCCATAATTTGAACTTCTTGGCTGAATTGCTGCATC-AAGTTTTCATTTACT 317841 Query 42464 ATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATAT 42511 | || ||||| ||||||| | | || | ||| ||||| |||| Sbjct 317842 AGGCCATCACTCACTGCAAAGGAAGTCAGAATATGAGATATAAGATAT 317889 Score = 91.5 bits (100), Expect = 2e-13 Identities = 103/135 (76%), Gaps = 5/135 (4%) Strand=Plus/Plus Query 41723 AAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTTT-TTG 41778 |||||| |||| || | ||| ||| ||| | || ||||| |||||||| | ||| Sbjct 317127 AAGTCAGCATCCAAGGTGAAAGAATTCTCTGTTGGATCTGACATCACTCCCATCCTCTTG 317186 Query 41779 GTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTTTCCAT 41838 |||||||| || | || || || ||||| ||||| ||||||| ||| ||||||||||| Sbjct 317187 ATATTCACCTACTCTCTTCTCAAAGAAATT-GTCTTCCCTTCCAGTGAAATATTTTCCAT 317245 Query 41839 GAAATCAAACGGATT 41853 ||| ||||| ||||| Sbjct 317246 GAAGTCAAATGGATT 317260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 669839069141760