Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannospalax_20galili_20[refseq_20GCF_5F000622305.1_202014-06-05] 154,976 sequences; 3,061,424,619 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq32768 125 6e-24 >seq32768 Length=2389516 Score = 125 bits (138), Expect = 6e-24 Identities = 119/152 (78%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 127162 GGCTATTTAGGGTGCCAAGCTCTGTCTGAGATGATTCAGTTCTACCTCGAAGAGGTCATG 127221 || || || || |||||||| |||| |||||||| ||||| ||||| | || || ||| Sbjct 439733 GGTTACTTGGGTTGCCAAGCCTTGTCAGAGATGATCCAGTTTTACCTGGTGGAAGTGATG 439792 Query 127222 CCACAGGCAGAAAATCACGGACCCGACATAAAAGAACACGTCAATTCCCTGGGTGAAAAG 127281 || ||||| || || || ||||| ||||| ||||| ||||| ||||| ||||| || ||| Sbjct 439793 CCCCAGGCGGAGAACCATGGACCAGACATCAAAGAGCACGTGAATTCTCTGGGAGAGAAG 439852 Query 127282 CTGAAGACATTGAGACTTCGACTGCGTCGCTG 127313 |||||||| | || || || ||||| ||||| Sbjct 439853 CTGAAGACCCTAAGGCTGCGCCTGCGGCGCTG 439884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429242126150912