Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannospalax_20galili_20[refseq_20GCF_5F000622305.1_202014-06-05] 154,976 sequences; 3,061,424,619 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq9583 87.8 2e-12 >seq9583 Length=785227 Score = 87.8 bits (96), Expect = 2e-12 Identities = 116/161 (72%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 ||||||||| | || || || || | ||||| || | || ||| | ||||| ||| | Sbjct 66947 CAAAATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCTTGGAAGTGGAGCC 67006 Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 || ||||||||||||| | || || ||||| ||| | || ||||| || || || Sbjct 67007 CAGCGACACCATCGAGAACGTGAAGGCCAAGATCCAGGACGAGGAGGGCATCCCACCTGA 67066 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATG 24147 || ||||| ||||| | | ||||||||| || ||||||| Sbjct 67067 CCAGCAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATG 67107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429123949781280