Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannospalax_20galili_20[refseq_20GCF_5F000622305.1_202014-06-05] 154,976 sequences; 3,061,424,619 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq23020 93.3 4e-14 >seq23020 Length=748909 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || ||||||||||| | ||| || |||||| || || || || Sbjct 61170 GTGGACTCCTTCTGGATGTTGTAATCAGATAGAGTGCGGCCATCTTCCAGCTGCTTGCCG 61111 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||| || | ||| ||||| || || ||||| || ||||| ||||| || Sbjct 61110 GCGAAGATCAGCCTCTGCTGGTCAGGTGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTC 61051 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | ||||||| ||| || || |||| ||| | || ||||||||||| || Sbjct 61050 ACGTTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 60991 Query 114366 TTTACAAAAATCTGCATGGCT 114386 || || || ||||||||| || Sbjct 60990 TTCACGAAGATCTGCATGCCT 60970 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || |||||||| || || ||| || |||||| || ||||| || Sbjct 60942 GTGGACTCCTTCTGGATGTTGTAGTCAGACAGAGTGCGGCCATCTTCTAGCTGTTTGCCG 60883 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| || | ||| ||||| || || ||||| || ||||| ||||| || Sbjct 60882 GCAAAGATCAGCCTCTGCTGGTCAGGTGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTC 60823 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | ||||||| ||| || || |||| ||| | || ||||||||||| || Sbjct 60822 ACGTTCTCGATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 60763 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 60762 TTCACGAAGATCTGCAT 60746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419340862749312