Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neotoma_20lepida_20[genbank_20GCA_5F001675575.1_202016-06-23]
119,373 sequences; 2,353,855,022 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq73029 86.0 1e-11
>seq73029
Length=1854
Score = 86.0 bits (94), Expect = 1e-11
Identities = 98/130 (75%), Gaps = 4/130 (3%)
Strand=Plus/Plus
Query 35567 GATCTTCACCTTATGGCTCTTCCTCCATGCCACATGACTGCT--CAATTTTATGTGGCTA 35624
||||||| ||| ||||| || ||||| ||||| || | || ||||| ||||||| |
Sbjct 1377 GATCTTCCCCTGATGGCACTGCCTCCTTGCCA--TGCCCTCTGTCAATTCTATGTGGTGA 1434
Query 35625 ATGGAGAATTGTCGTGCCAGTTGTATCAGCGAAGCGGAGATGTCGGGTTGGGCGTGCCCT 35684
|||| || |||| |||||| | || ||| | |||||| | || ||||||||||||
Sbjct 1435 ATGGGGAGCTGTCTTGCCAGCTTTACCAGAGGTCAGGAGATATGGGCCTGGGCGTGCCCT 1494
Query 35685 TCAATATTGC 35694
|||| |||||
Sbjct 1495 TCAACATTGC 1504
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 988070464361215
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |