Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neotoma_20lepida_20[genbank_20GCA_5F001675575.1_202016-06-23]
119,373 sequences; 2,353,855,022 total letters
Query= NC_005337.1
Length=134431
Score E
Sequences producing significant alignments: (Bits) Value
seq87169 96.9 3e-15
>seq87169
Length=633259
Score = 96.9 bits (106), Expect = 3e-15
Identities = 98/128 (77%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 127162 GGCTATTTAGGGTGCCAAGCTCTGTCTGAGATGATTCAGTTCTACCTCGAAGAGGTCATG 127221
|| || || || |||||||| | || || ||||| ||||| ||||| | ||| || |||
Sbjct 194973 GGTTACTTGGGTTGCCAAGCCTTATCAGAAATGATCCAGTTTTACCTGGTAGAAGTGATG 195032
Query 127222 CCACAGGCAGAAAATCACGGACCCGACATAAAAGAACACGTCAATTCCCTGGGTGAAAAG 127281
|| ||||||||||| || || || || || || || || | || |||||||| || |||
Sbjct 195033 CCCCAGGCAGAAAACCATGGCCCAGAAATCAAGGAGCATTTGAACTCCCTGGGAGAGAAG 195092
Query 127282 CTGAAGAC 127289
||||||||
Sbjct 195093 CTGAAGAC 195100
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429428731727576
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |