Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neotoma_20lepida_20[genbank_20GCA_5F001675575.1_202016-06-23]
119,373 sequences; 2,353,855,022 total letters
Query= NC_009333.1
Length=137969
Score E
Sequences producing significant alignments: (Bits) Value
seq73029 98.7 9e-16
>seq73029
Length=1854
Score = 98.7 bits (108), Expect = 9e-16
Identities = 112/151 (74%), Gaps = 0/151 (0%)
Strand=Plus/Minus
Query 20249 TGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCC 20308
|| |||| ||| || || | |||| ||||||||||||||| || || || |||| |||
Sbjct 1537 TGTGCAATCATGTANGTGAGCAGGGCATAGCTGGCAATGTTGAAGGGCACGCCCAGGCCC 1478
Query 20309 ATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTGA 20368
|| ||||| |||||||| || ||||| || || ||||| || | | ||||| ||||||
Sbjct 1477 ATATCTCCTGACCTCTGGTAAAGCTGGCAAGACAGCTCCCCATTCACCACATAGAATTGA 1418
Query 20369 CATAACAAGTGACAGGGCGGAAGCGCCATCA 20399
|| | || || || || || |||||||
Sbjct 1417 CAGAGGGCATGGCAAGGAGGCAGTGCCATCA 1387
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 440714200059320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |