Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neotoma_20lepida_20[genbank_20GCA_5F001675575.1_202016-06-23]
119,373 sequences; 2,353,855,022 total letters
Query= NC_009334.1
Length=172764
Score E
Sequences producing significant alignments: (Bits) Value
seq87169 105 7e-18
>seq87169
Length=633259
Score = 105 bits (116), Expect = 7e-18
Identities = 103/133 (77%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 9861 AGGGCTACCTTGGATGCCAGGCCCTGTCAGAAATGATCCAATTCTACCTGGAGGAAGTCA 9920
|||| ||| | || ||||| ||| | |||||||||||||| || ||||||| ||||| |
Sbjct 194971 AGGGTTACTTGGGTTGCCAAGCCTTATCAGAAATGATCCAGTTTTACCTGGTAGAAGTGA 195030
Query 9921 TGCCACAGGCTGAAAACCAGGACCCTGAAGCCAAAGACCATGTAAATTCTTTGGGTGAAA 9980
|||| ||||| |||||||| | ||| ||| ||| || ||| | || || |||| || |
Sbjct 195031 TGCCCCAGGCAGAAAACCATGGCCCAGAAATCAAGGAGCATTTGAACTCCCTGGGAGAGA 195090
Query 9981 ATCTAAAGACCCT 9993
| || ||||||||
Sbjct 195091 AGCTGAAGACCCT 195103
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 551892056717920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |