Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neotoma_20lepida_20[genbank_20GCA_5F001675575.1_202016-06-23]
119,373 sequences; 2,353,855,022 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq44403 102 1e-16
>seq44403
Length=740699
Score = 102 bits (112), Expect = 1e-16
Identities = 113/151 (75%), Gaps = 0/151 (0%)
Strand=Plus/Minus
Query 203910 CCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGT 203969
||| || ||| ||||| | |||||| || ||||||| ||| || || || ||||
Sbjct 634857 CCTGCTTCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATGT 634798
Query 203970 GAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATATTGATAA 204029
| ||||| | |||||||||||| |||||||||| | | || || ||||| |||| ||
Sbjct 634797 GGATGTTTAAAGACTGGCTTTGATCGATGAAAGCACCTCTCTCGGCTGCCATCTTGAGAA 634738
Query 204030 TGGTCTTCTGCGAAATCTCCCACACCGTCTT 204060
|||||||| || || |||||||| |||||
Sbjct 634737 CAGTCTTCTGAGAGATTTCCCACACAGTCTT 634707
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 793968699228880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |