Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neotoma_20lepida_20[genbank_20GCA_5F001675575.1_202016-06-23] 119,373 sequences; 2,353,855,022 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq44403 86.0 8e-12 >seq44403 Length=740699 Score = 86.0 bits (94), Expect = 8e-12 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 112008 TATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGT 112067 || || ||||| |||||| || ||| | ||||||||||| ||| ||| ||| Sbjct 624435 TACCTGGAGCCTTGGCACTTAGACATCTTTGAGTTCCTTGACTTGAAGAAGAACACAGGG 624494 Query 112068 GATGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATG 112127 | || ||| ||| ||| |||||||||| || || ||||||||||||||||||||| Sbjct 624495 AAGGAAGAGCAGCGAGCCCGGGATCTCTTCTTTGCACTTTGGATTCCAGATCTCTTCATG 624554 Query 112128 AAGAGAGTTGAG 112139 ||| |||| ||| Sbjct 624555 AAGCGAGTGGAG 624566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 619816151468560