Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neotoma_20lepida_20[genbank_20GCA_5F001675575.1_202016-06-23] 119,373 sequences; 2,353,855,022 total letters Query= NC_015049.1 Length=124335 Score E Sequences producing significant alignments: (Bits) Value seq47095 141 7e-29 seq44410 114 1e-20 seq107916 107 2e-18 seq55571 105 5e-18 seq98388 102 6e-17 seq66378 102 6e-17 seq107976 100 2e-16 seq117652 98.7 8e-16 seq66563 89.7 4e-13 seq34968 87.8 1e-12 seq8085 87.8 1e-12 seq76498 84.2 2e-11 seq18173 84.2 2e-11 >seq47095 Length=1017 Score = 141 bits (156), Expect = 7e-29 Identities = 200/281 (71%), Gaps = 0/281 (0%) Strand=Plus/Plus Query 674 TACCTGTTTGCGGCAGGGTTTCATTTCCCAGCCTCAGATATGTTTGTAACCATTGCACGC 733 |||||| ||| ||||||| | || |||| | ||| |||| | | || ||||| || | Sbjct 350 TACCTGAGTGCAGCAGGGTCGCCTTCCCCAACTTCAAATATTTCTTTAGCCATTCTACAC 409 Query 734 AACTGCCCATAATATATGACCCCTGATGGATGGCTTCATCTGTCGCTTCTAATTTCCTTT 793 || ||||| | || | ||| |||| ||| || |||| | | ||||| || | | Sbjct 410 AAGTGCCCTGCAGGTACATTCTCTGGTGGAGGGCCTCCTCTGCCTCCTCTAACTTGCGCT 469 Query 794 TAGAAATTTGAGAGGACATGTCTCTAGCGGTCCAGGTCCTGAGATCTTCATTCAAAGAAA 853 |||| || || |||| || ||| | || ||||||| | || || || |||| || | Sbjct 470 TAGAGATCTGTGAGGCCAAGTCGTTTGCAGTCCAGGAGCGCAGGTCCTCGTTCAGGGAGA 529 Query 854 TGTAGTCCCTGCCATCATAGGCCTGTTGACAGTAGCCTCGAAGGAGGGTTCCATCCGGCC 913 |||| ||| |||||||||||||| |||||||| || || || ||||| || || |||| Sbjct 530 TGTAATCCTGGCCATCATAGGCCTCCTGACAGTACCCGCGGAGCAGGGTGCCTTCTGGCC 589 Query 914 CCACAACACAGCCGGACATCCATTGGAGGGTATGTGGTTCT 954 ||| | ||||| ||||||| || || || || |||||| Sbjct 590 CCAGGTCGCAGCCATACATCCACTGCAGCGTGTGAGGTTCT 630 >seq44410 Length=656585 Score = 114 bits (126), Expect = 1e-20 Identities = 194/281 (69%), Gaps = 0/281 (0%) Strand=Plus/Minus Query 674 TACCTGTTTGCGGCAGGGTTTCATTTCCCAGCCTCAGATATGTTTGTAACCATTGCACGC 733 |||||| || | ||||| | || |||| | || ||| | |||| ||| | | || Sbjct 115051 TACCTGAGCGCAGGAGGGTCGCCTTCCCCAACTCCAAGTATTTCTGTAGCCACTCTATGC 114992 Query 734 AACTGCCCATAATATATGACCCCTGATGGATGGCTTCATCTGTCGCTTCTAATTTCCTTT 793 || |||| | || | || ||| ||| ||| || |||| | ||| | || | | Sbjct 114991 AAGCGCCCTGCAGGTAAGTCCTCTGGTGGTAGGCCTCTTCTGCATCCTCTGACTTGCGCT 114932 Query 794 TAGAAATTTGAGAGGACATGTCTCTAGCGGTCCAGGTCCTGAGATCTTCATTCAAAGAAA 853 |||| || || |||| || ||| | |||||||||| | || || || |||| | || Sbjct 114931 TAGAGATCTGTGAGGCCAAGTCGTTTGCGGTCCAGGAGCGCAGGTCCTCGTTCAGGGCAA 114872 Query 854 TGTAGTCCCTGCCATCATAGGCCTGTTGACAGTAGCCTCGAAGGAGGGTTCCATCCGGCC 913 |||| ||| |||||||||||||| |||||||| || || || ||| || || |||| Sbjct 114871 TGTAATCCTGGCCATCATAGGCCTCCTGACAGTACCCGCGGAGCAGGCGGCCCTCTGGCC 114812 Query 914 CCACAACACAGCCGGACATCCATTGGAGGGTATGTGGTTCT 954 ||| | ||||| ||||||| || || || ||||||||| Sbjct 114811 CCAGGTCGCAGCCATACATCCACTGCAGCGTGTGTGGTTCT 114771 Score = 102 bits (112), Expect = 6e-17 Identities = 139/189 (74%), Gaps = 4/189 (2%) Strand=Plus/Minus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| | ||||| || || ||||| ||||| | ||||| || | | | || Sbjct 12032 CCTCATGGTGCACATGGCATGTGTATTTCTGCTCCTCTCCAGCAGGCACCACCAGAGATG 11973 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| || || |||||||| |||||| || ||| | | || Sbjct 11972 CCCACTTCTGGAAGGTTCCATCCCCTGCAGGTCTGGTCTCCACCAGCTCCATGTCCTGAG 11913 Query 469 TCAGTTGCT-CTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAG-CCAGT 526 || ||| || || ||||| | ||||| || | || || || ||||| |||||| |||| Sbjct 11912 TCTGTTCCTCCTCCTCCC-TCTGCCAGGTCAGGGAGATCTCAGCAGGGTAGAAGTCCAG- 11855 Query 527 GGCCCAACA 535 |||||| || Sbjct 11854 GGCCCAGCA 11846 Score = 98.7 bits (108), Expect = 8e-16 Identities = 136/188 (72%), Gaps = 2/188 (1%) Strand=Plus/Minus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| | ||||| || || ||||| ||||| | | ||| || | | | || Sbjct 115816 CCTCATGGTGCACATGGCATGTGTATTTCTGCTCCTCCCCAGAAGGCACCACCAGAGATG 115757 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| || || |||||||| |||||| || ||| | | || Sbjct 115756 CCCACTTCTGGAAGGTTCCATCCCCTGCAGGTCTGGTCTCCACCAGCTCCATGTCCTGAG 115697 Query 469 TCAGTTGCT-CTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTG 527 || ||| || || ||||| | ||||| || | || || || ||||| |||||||| | Sbjct 115696 TCTGTTCCTCCTCCTCCC-TCTGCCAGGTCANGGAGATCTCAGCAGGGTAGAAGCCCAGG 115638 Query 528 GCCCAACA 535 ||||| || Sbjct 115637 GCCCAGCA 115630 Score = 95.1 bits (104), Expect = 1e-14 Identities = 133/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| | ||||| || || ||||| ||||| | |||||| ||| | || Sbjct 80698 CCTCATGGTACACATGGCATGTGTATTTCTGCTCCACCCCAGAAGGTACCACTAGAGATG 80639 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| || || |||||||| |||| | || ||| | | || Sbjct 80638 CCCACTTCTGGAAGGTTCCATCCCCTGCAGGTCTGGTCTCCATCAGCTCCATGTCTTGAG 80579 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 || ||| ||| | || | | ||| || | ||| || || ||||| |||||||| || Sbjct 80578 TCTGTTCCTCCTCATCCTTCTTCCAGGTCAGGGTGATATCAGCAGGGTAGAAGCCCAGGG 80519 Query 529 CCCAACA 535 |||| || Sbjct 80518 CCCAGCA 80512 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| | ||||| || || ||||| ||||| || ||| || | | |||| Sbjct 95684 CCTCATGCTCCACATGGCATGTGTATTTCTGCTCCTTCCCAAAAGGCACCACCACAGCTG 95625 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| || | ||| || |||||| || ||| | | | || Sbjct 95624 CCCACTTCTGGAAGGTTCCATCCCCTGTAACTCTTGTCTCCACCAGCTCCATCTCCTGAG 95565 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 || ||| ||| | || | ||||| || | ||| ||| |||| |||||| || || Sbjct 95564 TCTGTTCCTCCTCATCCCTCTGCCAGGTCAGGGTGATGAGGGCAGAATAGAACCCCAGGG 95505 Query 529 CCCAACATTTTAGTGTTACTTGACGGTCAGGT 560 |||| || | ||||| || | || |||||| Sbjct 95504 CCCAGCACCTGAGTGTGACATCACCTTCAGGT 95473 Score = 89.7 bits (98), Expect = 4e-13 Identities = 139/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||||| ||||| || |||||| | ||||| | | ||| || | | |||| Sbjct 139049 CCTCATGTTGCACATGGCATGTATATCTCTGCTCCTCCCCGGAAGGCACCACCACAGCTG 138990 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| | ||||||||||| | |||||||| ||||| | ||| | | | Sbjct 138989 CCCACTTCTGGGAGGTTCCATCTCCTGAAGGTCTGGTCTCCACAAGTTCCATGTCCTGAA 138930 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 |||| | ||| | ||| ||||| || | || || || ||||| |||||||| || Sbjct 138929 TCAGGTCCTCCCCAGCCAACTGCCAGGTCAGGGAGATCTCAGCAGGGTAGAAGCCCAAGG 138870 Query 529 CCCAACATTTTAGTGTTAC 547 |||| || || || || || Sbjct 138869 CCCAGCACTTCAGAGTGAC 138851 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/212 (69%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| | ||||| || ||||| ||||| || | |||||| | | | || Sbjct 28688 CCTCATGGTACACATGGCA----TATTTCTGCTCCTTCCCAGAAGGTACCACCAGAGATG 28633 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| || || |||||||| || | || | | | || Sbjct 28632 CCCACTTCTGGAAGGTTCCATCCCCTGCAGGTCTGGTCTCTGCAAGCTCTGTGTCTTGAG 28573 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 || ||| ||| | || | | ||| || | ||| ||||| ||||| ||||||||| || Sbjct 28572 TCTGTTCCTCCTCATCCCTCTTCCAGGTCAGGGTGATGTCAGCAGGGTAGAAGCCAAGGG 28513 Query 529 CCCAACATTTTAGTGTTACTTGACGGTCAGGT 560 |||| || | || || || | || |||||| Sbjct 28512 CCCAGCACCTCAGGGTGACATTACTTTCAGGT 28481 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| | ||||| || || ||||| ||||| | ||| || | | |||| Sbjct 2627 CCTCATGCTGCACATGGCATGTGTATTTGTGCTCCTCTCCAAAAGGCACCACCACAGCTG 2568 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| ||| ||||||| || | |||||||| |||||| | ||| | | | Sbjct 2567 CCCACTTCTGGAAATTTCCATCCCCTGTAGGTCTGGTCTCCACCAGTTCCATGTCCTGTG 2508 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 || ||| ||| | || | | ||| || | || ||||| ||||| ||||| || || Sbjct 2507 TCTGTTCCTCCTCATCCCTCTTCCAAGTCAGAGTGATGTCAGCAGGGTAGAATCCCAGGG 2448 Query 529 CCCAACATTTTAGTGTTACTTGACGGTCAG 558 |||| || | ||||| || | || |||| Sbjct 2447 CCCAGCACCTGAGTGTGACATCACCTTCAG 2418 Score = 82.4 bits (90), Expect = 6e-11 Identities = 116/163 (71%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 792 TTTAGAAATTTGAGAGGACATGTCTCTAGCGGTCCAGGTCCTGAGATCTTCATTCAAAGA 851 |||||| || || |||| || ||| | |||||||||| | || || || | || || Sbjct 63952 TTTAGACATCTGTGAGGCCAAGTCGTTTGCGGTCCAGGAGCGCAGGTCCTCGTCCAGGGA 63893 Query 852 AATGTAGTCCCTGCCATCATAGGCCTGTTGACAGTAGCCTCGAAGGAGGGTTCCATCCGG 911 ||||| |||| || ||||||||||| |||||||| || || | || ||||| || Sbjct 63892 GATGTAATCCCGGCTATCATAGGCCTCCTGACAGTACCCGCGGACCAGTTGCCCATCTGG 63833 Query 912 CCCCACAACACAGCCGGACATCCATTGGAGGGTATGTGGTTCT 954 ||||| | || || ||||||| || || || || | |||| Sbjct 63832 CCCCAGGTCGCAACCATACATCCACTGCAGCGTGTGAGTTTCT 63790 >seq107916 Length=669868 Score = 107 bits (118), Expect = 2e-18 Identities = 138/188 (73%), Gaps = 2/188 (1%) Strand=Plus/Minus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| | |||||||| || ||||| ||||| | | ||| || | | | || Sbjct 639370 CCTCATGGTGCACATGACATGTGTATTTCTGCTCCTCCCCAGAAGGCACCACCAGAGATG 639311 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| || || |||||||| |||||| || ||| | | || Sbjct 639310 CCCACTTCTGGAAGGTTCCATCCCCTGCAGGTCTGGTCTCCACCAGCTCCATATCCTGAG 639251 Query 469 TCAGTTGCT-CTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTG 527 || ||| || || ||||| | ||||| |||| ||| ||| ||||| |||||||| | Sbjct 639250 TCTGTTCCTCCTCCTCCC-TCTGCCAGGTTAGGGTGATGAGGGCAGGGTAGAAGCCCAGG 639192 Query 528 GCCCAACA 535 ||||| || Sbjct 639191 GCCCAGCA 639184 >seq55571 Length=69732 Score = 105 bits (116), Expect = 5e-18 Identities = 170/242 (70%), Gaps = 2/242 (1%) Strand=Plus/Minus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| | |||||||| || ||||| ||||| | | ||| || | | | || Sbjct 62077 CCTCATGGTGCACATGACATGTGTATTTCTGCTCCTCCCCAGAAGGCACCACCAGAGATG 62018 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| || || |||||||| |||| | || ||| | | || Sbjct 62017 CCCACTTCTGGAAGGTTCCATCCCCTGCAGGTCTGGTCTCCATCAGCTCCATGTCCTGAG 61958 Query 469 TCAGTTGCT-CTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTG 527 || ||| || || ||||| | ||||| || | ||| ||| ||||| |||||||| | Sbjct 61957 TCTGTTCCTCCTCCTCCC-TCTGCCAGGTCAGGGTGATGAGGGCAGGGTAGAAGCCCAGG 61899 Query 528 GCCCAACATTTTAGTGTTACTTGACGGTCAGGTGTTGCTTGTCTGGTCACGTGAACCTGT 587 ||||| ||| || || |||| | ||||| | || |||||||| || ||| | Sbjct 61898 GCCCAGCATCGAAGGGTGACTTTCCCTTCAGGGCCAGGATGACTGGTCACATGTGCCTTT 61839 Query 588 GG 589 || Sbjct 61838 GG 61837 Score = 95.1 bits (104), Expect = 1e-14 Identities = 135/188 (72%), Gaps = 2/188 (1%) Strand=Plus/Minus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| | ||||| || || || || ||||| | | || || | | | || Sbjct 27498 CCTCATGGTGCACATGGCATGTGTAATTCTGCTCCTCCCCAGAAGAAACCACCAGAGATG 27439 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| || || || ||||| |||||| || ||| | | || Sbjct 27438 CCCACTTCTGGAAGGTTCCATCCCCTGCAGGNCTGGTCTCCACCAGCTCCATGTCCTGAG 27379 Query 469 TCAGTTGCT-CTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTG 527 || ||| || || ||||| | ||||| || | ||| ||||| ||||| |||||||| | Sbjct 27378 TCTGTTCCTCCTCCTCCC-TCTGCCAGGTCAGGGTGATGTCAGCAGGGTAGAAGCCCAGG 27320 Query 528 GCCCAACA 535 ||||| || Sbjct 27319 GCCCAGCA 27312 >seq98388 Length=25574 Score = 102 bits (112), Expect = 6e-17 Identities = 137/188 (73%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| | ||||| || || ||||| ||||| | ||||| || | | | || Sbjct 16936 CCTCATGGTGCACATGGCATGTGTATTTCTGCTCCTCCCCAGCAGGCACCACCAGAGATG 16995 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| || || |||||||| |||||| || ||| | | || Sbjct 16996 CCCACTTCTGGAAGGTTCCATCCCCTGCAGGTCTGGTCTCCACCAGCTCCATGTCCTGAG 17055 Query 469 TCAGTTGCT-CTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTG 527 || ||| || || ||||| | ||||| || | || ||| |||||| |||||||| | Sbjct 17056 TCTGTTCCTCCTCCTCCC-TCTGCCAGGTCAGGGAGATGAGCGCAGGGTAGAAGCCCAGG 17114 Query 528 GCCCAACA 535 ||||| || Sbjct 17115 GCCCAGCA 17122 >seq66378 Length=252399 Score = 102 bits (112), Expect = 6e-17 Identities = 139/189 (74%), Gaps = 4/189 (2%) Strand=Plus/Plus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| | ||||| || || ||||| ||||| | ||||| || | | | || Sbjct 65286 CCTCATGGTGCACATGGCATGTGTATTTCTGCTCCTCTCCAGCAGGCACCACCAGAGATG 65345 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| || || |||||||| |||||| || ||| | | || Sbjct 65346 CCCACTTCTGGAAGGTTCCATCCCCTGCAGGTCTGGTCTCCACCAGCTCCATGTCCTGAG 65405 Query 469 TCAGTTGCT-CTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAG-CCAGT 526 || ||| || || ||||| | ||||| || | || || || ||||| |||||| |||| Sbjct 65406 TCTGTTCCTCCTCCTCCC-TCTGCCAGGTCAGGGAGATCTCAGCAGGGTAGAAGTCCAG- 65463 Query 527 GGCCCAACA 535 |||||| || Sbjct 65464 GGCCCAGCA 65472 >seq107976 Length=334363 Score = 100 bits (110), Expect = 2e-16 Identities = 133/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 351 TCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTGCC 410 ||||||| |||||||| |||||| | ||||| | | ||||||| | | |||||| Sbjct 35877 TCATGTTGCACATGACATGTATATCTCTGCTCCTCTCCAGAAGGTACTACCACAGCTGCC 35818 Query 411 CACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAGTC 470 |||||||| || ||||||||||| || || ||||| | |||| || ||| | | |||| Sbjct 35817 CACTTCTGGAAGGTTCCATCTCCTGCAGGCCTGGTGTTCACCAGCTCCATGTCCTGAGTC 35758 Query 471 AGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGGCC 530 | | || | || | ||||| || | ||| || || ||||| ||||| || |||| Sbjct 35757 TGGTCTTCCCCATCCCTCTGCCAGGTCAGGGTGATATCAGCAGGGTAGAATCCGAGGGCC 35698 Query 531 CAACA 535 || || Sbjct 35697 CAGCA 35693 Score = 100 bits (110), Expect = 2e-16 Identities = 133/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 351 TCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTGCC 410 ||||||| |||||||| |||||| | ||||| | | ||||||| | | |||||| Sbjct 62752 TCATGTTGCACATGACATGTATATCTCTGCTCCTCTCCAGAAGGTACTACCACAGCTGCC 62693 Query 411 CACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAGTC 470 |||||||| || ||||||||||| || || ||||| |||||| || ||| | | ||| Sbjct 62692 CACTTCTGGAAGGTTCCATCTCCTGCAGGCCTGGTGTCCACCAGCTCCATGTCCTGGGTC 62633 Query 471 AGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGGCC 530 | || | || | ||||| || | ||| ||||| ||||| ||||| || |||| Sbjct 62632 TTATCTTCCCCATCCCTCTGCCAGGTCAGGGTGATGTCAGCAGGGTAGAATCCCAGGGCC 62573 Query 531 CAACA 535 || || Sbjct 62572 CAGCA 62568 Score = 91.5 bits (100), Expect = 1e-13 Identities = 125/175 (71%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| |||||||| || ||| | | ||| | | ||| || | | |||| Sbjct 102134 CCTCATGGACCACATGACATGTGTATCTCTCCTCCTCCCCAGAAGGCACCACCACAGCTG 102075 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| ||||||||||| || || |||||||| |||||| || ||| | | | Sbjct 102074 CCCACTTCTGGAAAGTTCCATCCCCTGCAGGTCTGGTCTCCACCAGCTCCATGTCCTGAT 102015 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCC 523 |||| | ||| | | | ||||| || | ||| || |||| |||||||||||| Sbjct 102014 TCAGGTCCTCCCCATCTCTCTGCCAGGTCAAGGTGATCTCCGAAGGATAGAAGCC 101960 Score = 87.8 bits (96), Expect = 1e-12 Identities = 127/177 (72%), Gaps = 2/177 (1%) Strand=Plus/Minus Query 360 ACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTGCCCACTTCTGA 419 ||||| || || ||| | ||||||| || ||| || | | |||||||||||||| Sbjct 20799 ACATGGCATGTGTATCTCTGCTCTTCTCCTGAAGGCACCACCACAGCTGCCCACTTCTGG 20740 Query 420 AAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAGTCAGTTGCTCT 479 || |||||||| || || |||||||| || | | ||| | | ||||| | ||| Sbjct 20739 AAGGTTCCATCCCCTGCAGGTCTGGTCTCAATAAGATCCATGTCCTGGGTCAGGTCCTCC 20680 Query 480 GCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAG-CCAGTGGCCCAACA 535 | | | ||||| || | ||| |||||||||||||||||| |||| |||||| || Sbjct 20679 TCATNCCTCTGCCAGGTCAGGGTGATGTCCGCAGGATAGAAGNCCAG-GGCCCAGCA 20624 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 351 TCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTGCC 410 ||||||| |||||||| | |||| | ||||| | | ||| || | | |||||| Sbjct 78833 TCATGTTGCACATGACATGNATATCTCTGCTCCTCTCCAGAAGGCACCACCACTGCTGCC 78892 Query 411 CACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAGTC 470 || ||||| || ||||||||||| || || ||||| |||||| || ||| | | |||| Sbjct 78893 CATTTCTGGAAGGTTCCATCTCCTGCAGGCCTGGTGTCCACCAGCTCCATGTCCTGAGTC 78952 Query 471 AGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGGCC 530 | | || | || | ||||| || | || || || ||||| ||||| | |||| Sbjct 78953 TGGTCTTCCCCATCCCTCTGCCAGGTCAGGGAGATCTCAGCAGGGTAGAATCTGAGGGCC 79012 Query 531 CAACATTTTAGTGTTACTTGACGGTCAGGT 560 || || ||| || || | || |||||| Sbjct 79013 CAGCACCTTAAGGTGACATCACCCTCAGGT 79042 >seq117652 Length=51985 Score = 98.7 bits (108), Expect = 8e-16 Identities = 134/187 (72%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| |||||||| || ||| | ||||||| || ||| || | | |||| Sbjct 38547 CCTCATGCAGCACATGACATGTGTATCTCTGCTCTTCTCCTGAAGGCACCACCACAGCTG 38606 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| || || |||||||| || | | ||| | | | Sbjct 38607 CCCACTTCTGGAAGGTTCCATCCCCTGCAGGTCTGGTCTCAATAAGATCCATGTCCTGGG 38666 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 |||| | ||| | || | ||||| || | ||| |||||||||||||||||||| || Sbjct 38667 TCAGGTCCTCCTCATCCCTCTGCCAGGTCAGGGTGATGTCCGCAGGATAGAAGCCCAGGG 38726 Query 529 CCCAACA 535 |||| || Sbjct 38727 CCCAGCA 38733 Score = 84.2 bits (92), Expect = 2e-11 Identities = 132/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 347 TGCCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGC 406 ||| ||||| |||||||| || ||| | ||||| | | |||||| | | || Sbjct 47975 TGCTTCATGCAGCACATGACATGTGTATCTCTGCTCCTCTCCAGAAGGTACCACCAGAGC 48034 Query 407 TGCCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATC 466 |||||||||||| || |||||||| || || || ||||| || || | ||| | | Sbjct 48035 TGCCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTCTCAACAAGGTCCATGTCCTG 48094 Query 467 AGTCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGT 526 ||||| | |||| | ||| ||||| ||| ||| ||||| | ||| |||||||| Sbjct 48095 GGTCAGGTCCTCTTCATCCAGCTGCCAGATTAGGGTGATGTCTGAAGGGTAGAAGCCCAG 48154 Query 527 GGCCCAACA 535 |||||| || Sbjct 48155 GGCCCAGCA 48163 >seq66563 Length=108980 Score = 89.7 bits (98), Expect = 4e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 13087 TGCCTACCTGAGCGACAATGGAATCAGCAGCGCCAGGGAGTATGCAGACAGGAGGTGGAT 13146 ||||||||||| | ||||||| |||||||| ||||||| |||||||||||||| ||||| Sbjct 44061 TGCCTACCTGAACAACAATGGCATCAGCAGTGCCAGGGTCTATGCAGACAGGAGATGGAT 44002 Query 13147 ATGCAGCAAGCC 13158 || |||||||| Sbjct 44001 CTGTAGCAAGCC 43990 >seq34968 Length=251988 Score = 87.8 bits (96), Expect = 1e-12 Identities = 131/187 (70%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| | ||||| || || ||||| | ||| | | ||| || | | | || Sbjct 96199 CCTCATGATACACATGGCATGTGTATTTCTCCTCCTCCCCAGAAGGCACCACCAGAGATG 96140 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| || || |||||||| |||||| || ||| | | || Sbjct 96139 CCCACTTCTGGAAGGTTCCATCCCCTGCAGGTCTGGTCTCCACCAGCTCCATGTCCTGAG 96080 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 || ||| |||| | || | ||||| | | ||| ||| | ||| |||||||| || Sbjct 96079 TCTGTTCCTCTTCNTCCCTCTGCCAGNTCAGGGTGATGAGGGGAGGGTAGAAGCCCAGGG 96020 Query 529 CCCAACA 535 |||| || Sbjct 96019 CCCAGCA 96013 >seq8085 Length=212741 Score = 87.8 bits (96), Expect = 1e-12 Identities = 127/177 (72%), Gaps = 2/177 (1%) Strand=Plus/Plus Query 360 ACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTGCCCACTTCTGA 419 ||||| || || ||| | ||||||| || ||| || | | |||||||||||||| Sbjct 6652 ACATGGCATGTGTATCTCTGCTCTTCTCCTGAAGGCACCACCACAGCTGCCCACTTCTGG 6711 Query 420 AAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAGTCAGTTGCTCT 479 || |||||||| || || |||||||| || | | ||| | | ||||| | ||| Sbjct 6712 AAGGTTCCATCCCCTGCAGGTCTGGTCTCAATAAGATCCATGTCCTGGGTCAGGTCCTCC 6771 Query 480 GCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAG-CCAGTGGCCCAACA 535 | | | ||||| || | ||| |||||||||||||||||| |||| |||||| || Sbjct 6772 TCATNCCTCTGCCAGGTCAGGGTGATGTCCGCAGGATAGAAGTCCAG-GGCCCAGCA 6827 Score = 84.2 bits (92), Expect = 2e-11 Identities = 132/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 347 TGCCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGC 406 ||| ||||| |||||| | |||||| | ||||| | | ||| || | | || Sbjct 15651 TGCTTCATGCAGCACATGATATGTATATCTCTGCTCCTCTCCAGAAGGCACCACCAGAGC 15710 Query 407 TGCCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATC 466 |||||||||||| || |||||||| || || || ||||| || || | ||| | | Sbjct 15711 TGCCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTCTCAACAAGGTCCATGTCCTG 15770 Query 467 AGTCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGT 526 ||||| | |||| | ||| ||||| ||| ||| ||||| | |||||||||||| Sbjct 15771 GGTCAGGTCCTCTTCATCCAGCTGCCAGATTAGGGTGATGTCTGAAGGATAGAAGCCCAG 15830 Query 527 GGCCCAACA 535 |||||| || Sbjct 15831 GGCCCAGCA 15839 >seq76498 Length=55546 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/188 (71%), Gaps = 2/188 (1%) Strand=Plus/Minus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| | ||||| || || ||||| ||||| | | ||| || | | | | Sbjct 35196 CCTCATGGTGCACATGGCATGTGTATTTCTGCTCCTCCCCAGAAGGCACCACCAGAGACG 35137 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| || | |||||||| |||||| || ||| | | || Sbjct 35136 CCCACTTCTGGAAGGTTCCATCCCCTGAAGGTCTGGTCTCCACCAGCTCCATGTCCTGAG 35077 Query 469 TCAGTTGCT-CTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTG 527 || | | || || ||||| | ||||| || | || ||| |||||| |||||||| | Sbjct 35076 TCTGCTCCTCCTCCTCCC-TCTGCCAGGTCAGGGAGATGAGCGCAGGGTAGAAGCCCAGG 35018 Query 528 GCCCAACA 535 ||||| || Sbjct 35017 GCCCAGCA 35010 >seq18173 Length=40700 Score = 84.2 bits (92), Expect = 2e-11 Identities = 163/241 (68%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 351 TCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTGCC 410 ||||||| |||||||| || | | | ||||| | | ||||||| | | |||||| Sbjct 3797 TCATGTTGCACATGACATGTGTGTCTCTGCTCCTCTCCAGAAGGTACTACCACAGCTGCC 3738 Query 411 CACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAGTC 470 |||||||| || ||||||||||| || || ||||| | ||| || ||| | | |||| Sbjct 3737 CACTTCTGGAAGGTTCCATCTCCTGCAGGCCTGGTGTTCACTAGCTCCATGTCCTGAGTC 3678 Query 471 AGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGGCC 530 | | || | || | ||||| || | ||| || || || |||||||| | |||| Sbjct 3677 TGGTCTTCCCCATCCCTCTGCCAGGTCAGGGTTATCTCAGCTGGATAGAATCTGAGGGCC 3618 Query 531 CAACATTTTAGTGTTACTTGACGGTCAGGTGTTGCTTGTCTGGTCACGTGAACCTGTGGA 590 || || ||| || || || |||||| | | || ||| || || ||| |||| Sbjct 3617 CAGCACCTTAAGGTGACACCACCTTCAGGTCTAGGGTGATGGGTTACATGTGCCTTTGGA 3558 Query 591 G 591 | Sbjct 3557 G 3557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397168534130088