Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neotoma_20lepida_20[genbank_20GCA_5F001675575.1_202016-06-23] 119,373 sequences; 2,353,855,022 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq14694 96.9 4e-15 >seq14694 Length=1798513 Score = 96.9 bits (106), Expect = 4e-15 Identities = 77/93 (83%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTC 36931 ||| || ||||| | || |||||||| ||||| | || || || |||||||||||||| Sbjct 772146 CATCACCCCCATCCTCTGGTATTCTCCCACTCGCTTCTCAAAGAAGTTTGTCTTTCCTTC 772205 Query 36932 TAGTGATATATTTTCCATAAAATCAAATGGATT 36964 |||||| ||||||||||| || ||||||||||| Sbjct 772206 TAGTGAAATATTTTCCATGAAGTCAAATGGATT 772238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 591432967082920