Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neotoma_20lepida_20[genbank_20GCA_5F001675575.1_202016-06-23]
119,373 sequences; 2,353,855,022 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq97228 122 7e-23
>seq97228
Length=228612
Score = 122 bits (134), Expect = 7e-23
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 101258 AAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCG 101317
|| || | ||||||||| || || ||||| || ||||| || | | ||| | | ||||
Sbjct 211777 AACACAAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGGCCATCT 211718
Query 101318 TCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCT 101377
|||| |||||||| || || |||| | || ||||| || ||||| |||||||||||
Sbjct 211717 TCCAGCTGCTTACCAGCGAAGATCAGCCTTTGCTGATCAGGAGGAATTCCTTCTTTATCC 211658
Query 101378 TGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTT 101437
|| || || |||||| |||||| |||||| || | ||| || || || |||| |||
Sbjct 211657 TGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGCGTGATGGTT 211598
Query 101438 TTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || | | || || || || ||||||||
Sbjct 211597 TTCCCCATAAGGGTCTTCACGAAAATCTGCAT 211566
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395701871026161
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |