Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neotoma_20lepida_20[genbank_20GCA_5F001675575.1_202016-06-23]
119,373 sequences; 2,353,855,022 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq97228 105 1e-17
>seq97228
Length=228612
Score = 105 bits (116), Expect = 1e-17
Identities = 164/232 (71%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367
|||||| | ||| | || || | ||| | || | ||| ||| || || || || ||||
Sbjct 211793 ACCACCACGAAGTCTCAACACAAGATGAAGGGTGGACTCCTTTTGA-ATGTTGTAGTCAG 211735
Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427
| || || || |||| |||| || |||||||| ||||| | || || |||||||| |
Sbjct 211734 ACAAAGTACGGCCATCTTCCAGCTGCTTACCAGCGAAGATCAGCCTTTGCTGATCAGGAG 211675
Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487
| |||||||||||||| || || || |||||||| ||||| || || | ||| |
Sbjct 211674 GAATTCCTTCTTTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAA 211615
Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
| || || || |||||||| || | | || || | || |||||||| ||
Sbjct 211614 CCTCGAGCGTGATGGTTTTCCCCATAAGGGTCTTCACGAAAATCTGCATCTT 211563
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 982974270758550
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |