Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neotoma_20lepida_20[genbank_20GCA_5F001675575.1_202016-06-23]
119,373 sequences; 2,353,855,022 total letters
Query= NC_024447.1
Length=282356
Score E
Sequences producing significant alignments: (Bits) Value
seq87317 84.2 4e-11
>seq87317
Length=177793
Score = 84.2 bits (92), Expect = 4e-11
Identities = 115/161 (71%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 58379 GCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCATA 58438
|| || |||||||||| | |||| ||||| | || || || |||||||||||||| ||
Sbjct 73784 GCCTTGTGGTGGTACTTTGTATCAAAAGGAGTTGAGTATTTGGATACAGTGTTTTTTATC 73843
Query 58439 CTTAGGAAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTACTATGTTT 58498
|| ||||| || ||||| ||| || || || || || ||||| | ||| |||||
Sbjct 73844 CTGAGGAAGAAAAACAATCAGGTTTCTTTCCTTCATGTGTACCATCACTGTACCATGTTC 73903
Query 58499 ACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCA 58539
|| | | ||| | || || || ||| | ||||| || ||
Sbjct 73904 ACACTGTGGTGGATTGGAATCAAGTGGGTGGCAGGTGGCCA 73944
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 902063163685280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |