Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neotoma_20lepida_20[genbank_20GCA_5F001675575.1_202016-06-23]
119,373 sequences; 2,353,855,022 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq14694 89.7 6e-13
>seq14694
Length=1798513
Score = 89.7 bits (98), Expect = 6e-13
Identities = 99/132 (75%), Gaps = 0/132 (0%)
Strand=Plus/Minus
Query 59980 AACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTA 60039
||||| | | || ||||| ||||||||| ||||||||||||||||| || | |
Sbjct 774227 AACGTGTGGTGGCCTTTGCCGCCGTGGAAGGGATCTTCTTCTCTGGCTCTTTTGCATCAA 774168
Query 60040 TTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTT 60099
| ||||||||||| || || || || ||||| ||||| | || ||||| ||||| |||
Sbjct 774167 TATTCTGGCTCAAGAAACGGGGACTGATGCCTGGCCTTACGTTTTCCAATGAGCTTATTA 774108
Query 60100 CCCGGGACGAGG 60111
| | |||||||
Sbjct 774107 GCAGAGACGAGG 774096
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547706311863120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |